MGE detailed information
MGE type: Mobilizable plasmid MGE length: 42104 bp
Accession: NC_019292 Location: 1..42104 Organism: Pseudomonas savastanoi Replicon: plasmid pPsv48C
Accession: NC_019292 Location: 1..42104 Organism: Pseudomonas savastanoi Replicon: plasmid pPsv48C
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PSPSV_RS00005 (PSPSV_C0001) | 1..1314 | + | 1314 | WP_015060860.1 | replication initiation protein | - |
| PSPSV_RS00010 (PSPSV_C0002) | 1540..1833 | + | 294 | WP_002556165.1 | HU family DNA-binding protein | - |
| PSPSV_RS00015 (PSPSV_C0003) | 1920..2105 | + | 186 | WP_122267529.1 | stability determinant | Antitoxin Detail |
| PSPSV_RS00020 (PSPSV_C0004) | 2105..2398 | + | 294 | WP_003348565.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PSPSV_RS00025 (PSPSV_C0005) | 2508..3392 | - | 885 | Protein_4 | IS3 family transposase IS51 | Transposase |
| PSPSV_RS00030 (PSPSV_C0006) | 3440..3973 | - | 534 | WP_057425675.1 | hypothetical protein | - |
| PSPSV_RS00035 (PSPSV_C0007) | 3979..4272 | - | 294 | WP_002556167.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PSPSV_RS00040 (PSPSV_C0008) | 4260..4532 | - | 273 | WP_002556168.1 | CopG family ribbon-helix-helix protein | Antitoxin Detail |
| PSPSV_RS00045 (PSPSV_C0010) | 4800..4922 | - | 123 | Protein_8 | stability/partitioning determinant | - |
| PSPSV_RS00050 | 5155..5529 | - | 375 | Protein_9 | integrase core domain-containing protein | - |
| PSPSV_RS00055 (PSPSV_C0013) | 5579..6801 | + | 1223 | WP_168550525.1 | IS3 family transposase IS51 | Transposase |
| PSPSV_RS00060 | 6840..7866 | - | 1027 | Protein_11 | transposase | - |
| PSPSV_RS00065 (PSPSV_C0015) | 8055..9041 | - | 987 | WP_244295729.1 | hypothetical protein | - |
| PSPSV_RS00070 (PSPSV_C0016) | 9087..9340 | - | 254 | Protein_13 | IS3 family transposase ISPsy24 | Transposase |
| PSPSV_RS00075 | 9881..10243 | - | 363 | WP_005730278.1 | hypothetical protein | - |
| PSPSV_RS00080 (PSPSV_C0017) | 10234..10914 | - | 681 | WP_005730279.1 | AAA family ATPase | - |
| PSPSV_RS00085 (PSPSV_C0018) | 11470..12504 | - | 1035 | WP_015060660.1 | IS110 family transposase ISPsy16 | Transposase |
| PSPSV_RS00090 (PSPSV_C0020) | 13595..14155 | + | 561 | WP_015060866.1 | Tn3 family transposase TnpR_ISPa40 | Transposase |
| PSPSV_RS00095 | 14195..14794 | + | 600 | Protein_18 | Tn3 family transposase TnpA_TnAs1 | Transposase |
| PSPSV_RS00100 (PSPSV_C0021) | 14905..15939 | + | 1035 | WP_015060660.1 | IS110 family transposase ISPsy16 | Transposase |
| PSPSV_RS00105 (PSPSV_C0022) | 16285..16668 | - | 384 | Protein_20 | IS5 family transposase ISPre1 | Transposase |
| PSPSV_RS00110 (PSPSV_C0023) | 16777..18450 | + | 1674 | WP_015060867.1 | radical SAM protein | - |
| PSPSV_RS00115 (PSPSV_C0024) | 18473..18931 | + | 459 | WP_015060868.1 | isopentenyl-diphosphate Delta-isomerase | - |
| PSPSV_RS00125 (PSPSV_C0027) | 20469..20876 | - | 408 | WP_015060869.1 | hypothetical protein | - |
| PSPSV_RS00130 (PSPSV_C0028) | 21262..21987 | + | 726 | WP_015060870.1 | ribbon-helix-helix domain-containing protein | - |
| PSPSV_RS00260 | 21977..22681 | + | 705 | Protein_26 | hypothetical protein | Relaxase |
| PSPSV_RS00265 | 22974..23393 | + | 420 | WP_244295731.1 | hypothetical protein | Relaxase |
| PSPSV_RS00270 | 24137..25741 | + | 1605 | WP_244295733.1 | hypothetical protein | Relaxase |
| PSPSV_RS00140 (PSPSV_C0030) | 25806..26045 | + | 240 | WP_004666950.1 | hypothetical protein | - |
| PSPSV_RS00145 (PSPSV_C0031) | 26116..26259 | + | 144 | WP_002556117.1 | hypothetical protein | - |
| PSPSV_RS00150 (PSPSV_C0032) | 26389..26817 | + | 429 | WP_015060872.1 | GntR family transcriptional regulator | - |
| PSPSV_RS00155 (PSPSV_C0033) | 27199..28407 | - | 1209 | WP_237772656.1 | IS91 family transposase | - |
| PSPSV_RS00160 | 28409..28690 | - | 282 | WP_060402791.1 | hypothetical protein | - |
| PSPSV_RS00165 (PSPSV_C0035) | 28732..29058 | + | 327 | WP_244295726.1 | hypothetical protein | - |
| PSPSV_RS00170 (PSPSV_C0036) | 29075..29302 | + | 228 | WP_015060874.1 | hypothetical protein | - |
| PSPSV_RS00175 (PSPSV_C0038) | 29772..30518 | + | 747 | WP_168550526.1 | hypothetical protein | - |
| PSPSV_RS00180 | 30602..30796 | + | 195 | WP_168550527.1 | hypothetical protein | - |
| PSPSV_RS00185 | 31145..31540 | + | 396 | WP_054082514.1 | hypothetical protein | - |
| PSPSV_RS00190 (PSPSV_C0040) | 31550..32077 | + | 528 | WP_002555999.1 | GNAT family N-acetyltransferase | - |
| PSPSV_RS00275 | 32099..32212 | - | 114 | Protein_40 | resolvase | - |
| PSPSV_RS00195 (PSPSV_C0041) | 32275..32553 | - | 279 | WP_015060875.1 | hypothetical protein | - |
| PSPSV_RS00200 (PSPSV_C0042) | 32647..32808 | - | 162 | Protein_42 | helix-turn-helix domain-containing protein | - |
| PSPSV_RS00205 (PSPSV_C0043) | 33313..33876 | + | 564 | WP_054082372.1 | hypothetical protein | - |
| PSPSV_RS00210 (PSPSV_C0044) | 33880..34311 | + | 432 | WP_015060877.1 | hypothetical protein | - |
| PSPSV_RS00215 | 34337..34477 | - | 141 | WP_168550528.1 | hypothetical protein | - |
| PSPSV_RS00220 (PSPSV_C0045) | 34616..34753 | + | 138 | WP_015060878.1 | hypothetical protein | - |
| PSPSV_RS00225 (PSPSV_C0046) | 34713..35288 | + | 576 | WP_220789530.1 | hypothetical protein | - |
| PSPSV_RS00230 (PSPSV_C0047) | 35279..36607 | + | 1329 | WP_179894034.1 | hypothetical protein | - |
| PSPSV_RS00235 (PSPSV_C0048) | 36706..39036 | - | 2331 | WP_002555997.1 | Mobilization protein A | Relaxase |
| PSPSV_RS00240 (PSPSV_C0049) | 39055..39300 | + | 246 | WP_002555996.1 | hypothetical protein | - |
| PSPSV_RS00245 (PSPSV_C0050) | 39628..39828 | + | 201 | WP_002555995.1 | hypothetical protein | Antitoxin Detail |
| PSPSV_RS00250 (PSPSV_C0051) | 39828..40106 | + | 279 | WP_002555994.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PSPSV_RS00255 (PSPSV_C0052) | 41480..41707 | + | 228 | WP_015060881.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|