MGE detailed information
MGE type: Prophage MGE length: 65518 bp
Accession: NC_017906 Location: 1247081..1312598 Organism: Escherichia coli Xuzhou21 Replicon: chromosome
Accession: NC_017906 Location: 1247081..1312598 Organism: Escherichia coli Xuzhou21 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CDCO157_RS06035 () | 1242251..1243171 | - | 921 | WP_000420639.1 | curved DNA-binding protein | - |
| CDCO157_RS06040 () | 1243431..1244688 | + | 1258 | Protein_1133 | YccE family protein | - |
| CDCO157_RS06045 () | 1244979..1246220 | + | 1242 | WP_001044286.1 | bifunctional glucose-1-phosphatase/inositol phosphatase | - |
| CDCO157_RS06050 () | 1246258..1246485 | - | 228 | WP_001143120.1 | YccJ family protein | - |
| CDCO157_RS06055 () | 1246506..1247084 | - | 579 | WP_000607020.1 | NAD(P)H:quinone oxidoreductase | - |
| CDCO157_RS06060 () | 1247081..1248391 | - | 1311 | WP_000013654.1 | Putative defective protein IntQ ; Integrase | Integrase |
| CDCO157_RS06065 () | 1248444..1248728 | - | 285 | WP_001208773.1 | excisionase family protein | - |
| CDCO157_RS06070 () | 1248814..1249113 | - | 300 | WP_001303965.1 | hypothetical protein | - |
| CDCO157_RS32930 () | 1249185..1249469 | - | 285 | WP_000002127.1 | ASCH domain-containing protein | - |
| CDCO157_RS06080 () | 1249462..1250085 | - | 624 | WP_000206752.1 | DUF551 domain-containing protein | - |
| CDCO157_RS06085 () | 1250089..1250376 | - | 288 | WP_000212746.1 | hypothetical protein | - |
| CDCO157_RS06090 () | 1250378..1250596 | - | 219 | WP_001142590.1 | DUF4014 family protein | - |
| CDCO157_RS06095 () | 1250598..1250813 | - | 216 | WP_000951705.1 | hypothetical protein | - |
| CDCO157_RS06100 () | 1250815..1251003 | - | 189 | WP_000797281.1 | hypothetical protein | - |
| CDCO157_RS06105 () | 1251155..1251928 | - | 774 | WP_001289936.1 | ead/Ea22-like family protein | - |
| CDCO157_RS28945 () | 1251925..1252146 | - | 222 | WP_000774248.1 | TraR/DksA family transcriptional regulator | - |
| CDCO157_RS06110 () | 1252245..1252460 | - | 216 | WP_000188870.1 | hypothetical protein | - |
| CDCO157_RS06115 () | 1252537..1252728 | - | 192 | WP_000548534.1 | DUF1382 family protein | - |
| CDCO157_RS06120 () | 1252701..1252883 | - | 183 | WP_000682306.1 | DUF1317 domain-containing protein | - |
| CDCO157_RS06125 () | 1252880..1253560 | - | 681 | WP_000186812.1 | YqaJ viral recombinase family protein | - |
| CDCO157_RS06130 () | 1253557..1254342 | - | 786 | WP_001302855.1 | phage recombination protein Bet | - |
| CDCO157_RS06135 () | 1254348..1254644 | - | 297 | WP_000995486.1 | host-nuclease inhibitor Gam family protein | - |
| CDCO157_RS31940 () | 1254719..1254862 | - | 144 | WP_000372937.1 | host cell division inhibitory peptide Kil | - |
| CDCO157_RS31945 () | 1254831..1254995 | - | 165 | WP_001198861.1 | protease FtsH-inhibitory lysogeny factor CIII | - |
| CDCO157_RS06150 () | 1255068..1255436 | - | 369 | WP_000065377.1 | DUF2528 family protein | - |
| CDCO157_RS06155 () | 1255587..1256057 | - | 471 | WP_000167595.1 | hypothetical protein | - |
| CDCO157_RS06160 () | 1256116..1256499 | - | 384 | WP_000198444.1 | hypothetical protein | - |
| CDCO157_RS32795 () | 1256988..1257152 | - | 165 | WP_000745483.1 | hypothetical protein | - |
| CDCO157_RS06165 () | 1257155..1258201 | - | 1047 | WP_000957426.1 | serine/threonine protein kinase | - |
| CDCO157_RS06170 () | 1258195..1258656 | - | 462 | WP_001221211.1 | hypothetical protein | - |
| CDCO157_RS06175 () | 1258724..1259065 | - | 342 | WP_000885203.1 | DUF3024 domain-containing protein | - |
| CDCO157_RS06180 () | 1259126..1259833 | - | 708 | WP_000250473.1 | helix-turn-helix transcriptional regulator | - |
| CDCO157_RS06185 () | 1259912..1260139 | + | 228 | WP_001180318.1 | helix-turn-helix domain-containing protein | - |
| CDCO157_RS06190 () | 1260278..1260577 | + | 300 | WP_000438537.1 | hypothetical protein | - |
| CDCO157_RS06195 () | 1260740..1261516 | + | 777 | WP_000062360.1 | helix-turn-helix domain-containing protein | - |
| CDCO157_RS06200 () | 1261627..1264533 | + | 2907 | WP_001444365.1 | toprim domain-containing protein | - |
| CDCO157_RS06205 () | 1264534..1264803 | + | 270 | WP_001036036.1 | hypothetical protein | - |
| CDCO157_RS06210 () | 1264889..1265104 | + | 216 | WP_000103679.1 | hypothetical protein | - |
| CDCO157_RS06215 () | 1265115..1265351 | + | 237 | WP_001281772.1 | Lar family restriction alleviation protein | - |
| CDCO157_RS06220 () | 1265308..1265754 | + | 447 | WP_000814576.1 | recombination protein NinB | - |
| CDCO157_RS06225 () | 1265751..1266278 | + | 528 | WP_000153280.1 | phage N-6-adenine-methyltransferase | - |
| CDCO157_RS06230 () | 1266275..1266457 | + | 183 | WP_001254256.1 | NinE family protein | - |
| CDCO157_RS06235 () | 1266732..1267409 | + | 678 | WP_000290549.1 | phage antirepressor Ant | - |
| CDCO157_RS06240 () | 1267484..1268206 | + | 723 | WP_001004009.1 | DNA-binding protein | - |
| CDCO157_RS06245 () | 1268206..1268811 | + | 606 | WP_001107963.1 | recombination protein NinG | - |
| CDCO157_RS06250 () | 1268808..1269002 | + | 195 | WP_000144764.1 | phage NinH family protein | - |
| CDCO157_RS06255 () | 1268995..1269429 | + | 435 | WP_001204880.1 | antitermination protein | - |
| CDCO157_RS06285 () | 1270213..1271172 | + | 960 | WP_000649753.1 | Shiga toxin subunit A | VF |
| CDCO157_RS06290 () | 1271184..1271453 | + | 270 | WP_000738068.1 | Shiga toxin subunit B | VF |
| CDCO157_RS06300 () | 1271939..1273876 | + | 1938 | WP_000874499.1 | SASA family carbohydrate esterase | - |
| CDCO157_RS06305 () | 1274011..1274190 | + | 180 | WP_000143458.1 | DUF1378 family protein | - |
| CDCO157_RS06310 () | 1274231..1274476 | + | 246 | WP_001290230.1 | DUF826 domain-containing protein | - |
| CDCO157_RS06315 () | 1274554..1274769 | + | 216 | WP_000284506.1 | class II holin family protein | - |
| CDCO157_RS06320 () | 1274774..1275307 | + | 534 | WP_000087728.1 | lysozyme | - |
| CDCO157_RS06325 () | 1275578..1276147 | + | 570 | WP_001056806.1 | hypothetical protein | - |
| CDCO157_RS31950 () | 1276147..1276293 | + | 147 | WP_000539792.1 | hypothetical protein | - |
| CDCO157_RS31960 () | 1276521..1276706 | + | 186 | WP_015971382.1 | Rz1 family lipoprotein | - |
| CDCO157_RS06340 () | 1276797..1277090 | - | 294 | WP_000738505.1 | serum resistance lipoprotein Bor | - |
| CDCO157_RS28975 () | 1277240..1277443 | + | 204 | WP_001301714.1 | hypothetical protein | - |
| CDCO157_RS06345 () | 1277499..1278305 | + | 807 | WP_001086069.1 | terminase | - |
| CDCO157_RS06350 () | 1278286..1279992 | + | 1707 | WP_000143988.1 | terminase | - |
| CDCO157_RS06355 () | 1279992..1282136 | + | 2145 | WP_000787519.1 | portal protein | - |
| CDCO157_RS06360 () | 1282294..1283301 | + | 1008 | WP_000345010.1 | hypothetical protein | - |
| CDCO157_RS06365 () | 1283325..1284539 | + | 1215 | WP_000214474.1 | N4-gp56 family major capsid protein | - |
| CDCO157_RS06370 () | 1284595..1284984 | + | 390 | WP_001140442.1 | hypothetical protein | - |
| CDCO157_RS06375 () | 1285034..1285495 | + | 462 | WP_001290743.1 | hypothetical protein | - |
| CDCO157_RS06380 () | 1285479..1286042 | + | 564 | WP_000829200.1 | hypothetical protein | - |
| CDCO157_RS06385 () | 1286042..1286692 | + | 651 | WP_000207924.1 | hypothetical protein | - |
| CDCO157_RS06390 () | 1286689..1288626 | + | 1938 | WP_000117994.1 | phage tail fiber C-terminal domain-containing protein | - |
| CDCO157_RS06395 () | 1288628..1288897 | + | 270 | WP_001024006.1 | phage tail fiber C-terminal domain-containing protein | - |
| CDCO157_RS06400 () | 1289037..1289225 | + | 189 | WP_001303606.1 | hypothetical protein | - |
| CDCO157_RS06405 () | 1289520..1291145 | + | 1626 | WP_001146326.1 | hypothetical protein | - |
| CDCO157_RS06410 () | 1291142..1292410 | + | 1269 | WP_000197192.1 | host specificity protein J | - |
| CDCO157_RS06415 () | 1292425..1292703 | + | 279 | WP_000455634.1 | outer membrane protein | - |
| CDCO157_RS06420 () | 1292709..1293326 | + | 618 | WP_001301884.1 | hypothetical protein | - |
| CDCO157_RS06425 () | 1293417..1294151 | + | 735 | WP_000835360.1 | Attachment invasion locus protein | VF |
| CDCO157_RS06440 () | 1294384..1294524 | + | 141 | WP_000078907.1 | Hok/Gef family protein | - |
| CDCO157_RS06445 () | 1294581..1294982 | + | 402 | WP_000035558.1 | hypothetical protein | - |
| CDCO157_RS06450 () | 1295076..1295732 | + | 657 | WP_000509481.1 | hypothetical protein | - |
| CDCO157_RS06455 () | 1295735..1296181 | + | 447 | WP_000455644.1 | hypothetical protein | - |
| CDCO157_RS06460 () | 1296191..1296442 | + | 252 | WP_000540391.1 | bacteriocin | - |
| CDCO157_RS06465 () | 1296453..1297718 | + | 1266 | WP_000012450.1 | hypothetical protein | - |
| CDCO157_RS06470 () | 1297788..1306169 | + | 8382 | WP_000331673.1 | hypothetical protein | - |
| CDCO157_RS06480 () | 1306720..1307064 | - | 345 | WP_000756595.1 | YgiW/YdeI family stress tolerance OB fold protein | - |
| CDCO157_RS06485 () | 1307184..1307339 | - | 156 | WP_000813258.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| - () | 1307351..1307409 | + | 59 | - | - | Antitoxin Detail |
| CDCO157_RS06490 () | 1307630..1308025 | - | 396 | WP_000426668.1 | hypothetical protein | - |
| CDCO157_RS06495 () | 1308025..1308924 | - | 900 | WP_014714116.1 | ead/Ea22-like family protein | - |
| CDCO157_RS06500 () | 1308911..1309195 | - | 285 | WP_001024844.1 | DUF4752 family protein | - |
| CDCO157_RS06505 () | 1309192..1309413 | - | 222 | WP_000763353.1 | TraR/DksA family transcriptional regulator | - |
| CDCO157_RS06510 () | 1309461..1310090 | - | 630 | WP_000203859.1 | phage antirepressor Ant | - |
| CDCO157_RS28985 () | 1311080..1311187 | + | 108 | WP_001273654.1 | hypothetical protein | - |
| CDCO157_RS06515 () | 1311270..1312598 | - | 1329 | WP_001301708.1 | pyrimidine utilization transport protein G | - |
| CDCO157_RS06520 () | 1312619..1313113 | - | 495 | WP_001028088.1 | pyrimidine utilization flavin reductase protein F | - |
| CDCO157_RS06525 () | 1313124..1313714 | - | 591 | WP_001001189.1 | malonic semialdehyde reductase | - |
| CDCO157_RS06530 () | 1313724..1314524 | - | 801 | WP_001301780.1 | pyrimidine utilization protein D | - |
| CDCO157_RS06535 () | 1314532..1314918 | - | 387 | WP_001126784.1 | pyrimidine utilization protein C | - |
| CDCO157_RS06540 () | 1314930..1315622 | - | 693 | WP_001303888.1 | peroxyureidoacrylate/ureidoacrylate amidohydrolase RutB | - |
| CDCO157_RS06545 () | 1315622..1316713 | - | 1092 | WP_001301233.1 | pyrimidine utilization protein A | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli O157:H7 str. Sakai | Prophage | TA10039 | NC_002695 | 1246182..1310801 | 0.008 |