MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NC_017656 Location: 4964139..4973490 Organism: Escherichia coli O55:H7 str. RM12579 Replicon: chromosome
Accession: NC_017656 Location: 4964139..4973490 Organism: Escherichia coli O55:H7 str. RM12579 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECO55CA74_RS24865 () | 4960870..4961589 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| ECO55CA74_RS24870 () | 4961586..4963217 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| ECO55CA74_RS24875 () | 4963398..4963628 | + | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| ECO55CA74_RS24880 () | 4963640..4963912 | + | 273 | WP_000405642.1 | N-acetyltransferase | - |
| ECO55CA74_RS24885 () | 4964139..4964435 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| ECO55CA74_RS24890 () | 4964463..4964636 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| ECO55CA74_RS24895 () | 4964755..4966272 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| ECO55CA74_RS24900 () | 4966509..4967966 | - | 1458 | WP_000856824.1 | dipeptide/tripeptide permease DtpC | - |
| ECO55CA74_RS24905 () | 4968025..4970172 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| ECO55CA74_RS24910 () | 4970252..4971586 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| ECO55CA74_RS24915 () | 4971952..4973490 | - | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| ECO55CA74_RS24930 () | 4974289..4974864 | - | 576 | WP_001419277.1 | transcriptional regulator | - |
| ECO55CA74_RS24935 () | 4974901..4976598 | - | 1698 | WP_000068930.1 | protein-disulfide reductase DsbD | - |
| ECO55CA74_RS24940 () | 4976574..4976912 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| ECO55CA74_RS24945 () | 4977028..4978329 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.006 |