MGE detailed information
MGE type: Prophage MGE length: 8910 bp
Accession: NC_017522 Location: 2958755..2967664 Organism: Mycobacterium tuberculosis CCDC5180 Replicon: chromosome
Accession: NC_017522 Location: 2958755..2967664 Organism: Mycobacterium tuberculosis CCDC5180 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CCDC5180_RS13970 () | 2954142..2954600 | + | 459 | WP_003413675.1 | glyoxalase/bleomycin resistance/dioxygenase family protein | - |
| CCDC5180_RS13975 () | 2954737..2955117 | + | 381 | WP_003899407.1 | metalloregulator ArsR/SmtB family transcription factor | - |
| CCDC5180_RS13980 () | 2955114..2956610 | + | 1497 | WP_003413686.1 | ACR3 family arsenite efflux transporter | - |
| CCDC5180_RS13985 () | 2956845..2957036 | + | 192 | WP_003912823.1 | antitoxin MazE family protein | - |
| CCDC5180_RS22885 () | 2957038..2957359 | + | 322 | Protein_2726 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| CCDC5180_RS14010 () | 2958327..2958758 | + | 432 | WP_003899409.1 | hypothetical protein | - |
| CCDC5180_RS14015 () | 2958755..2959753 | + | 999 | WP_003900538.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| CCDC5180_RS14020 () | 2959767..2960231 | + | 465 | WP_003900539.1 | ParB N-terminal domain-containing protein | - |
| CCDC5180_RS14025 () | 2960219..2960470 | + | 252 | WP_003908028.1 | hypothetical protein | - |
| CCDC5180_RS14030 () | 2960641..2962080 | - | 1440 | WP_003901443.1 | phage major capsid protein | - |
| CCDC5180_RS14035 () | 2962088..2962621 | - | 534 | WP_003899412.1 | HK97 family phage prohead protease | - |
| CCDC5180_RS21660 () | 2962774..2963265 | - | 492 | WP_003900541.1 | phage terminase small subunit P27 family | - |
| CCDC5180_RS14045 () | 2963432..2963755 | - | 324 | WP_003899414.1 | type II toxin-antitoxin system toxin | Toxin Detail |
| CCDC5180_RS14050 () | 2963835..2964080 | - | 246 | WP_003899415.1 | type II toxin-antitoxin system antitoxin | Antitoxin Detail |
| CCDC5180_RS14055 () | 2964077..2965504 | - | 1428 | WP_003899416.1 | DUF3631 domain-containing protein | - |
| CCDC5180_RS14060 () | 2965506..2965898 | - | 393 | WP_003899417.1 | DUF2742 domain-containing protein | - |
| CCDC5180_RS14065 () | 2965895..2966155 | - | 261 | WP_003899418.1 | helix-turn-helix domain-containing protein | - |
| CCDC5180_RS14070 () | 2966172..2966534 | - | 363 | WP_003900543.1 | hypothetical protein | - |
| CCDC5180_RS14075 () | 2966537..2967664 | - | 1128 | WP_003899420.1 | hypothetical protein ; Integrase | Integrase |
| CCDC5180_RS14080 () | 2967809..2968036 | - | 228 | WP_003899421.1 | hypothetical protein | - |
| CCDC5180_RS21665 () | 2968033..2968422 | - | 390 | WP_003899422.1 | hypothetical protein | - |
| CCDC5180_RS14085 () | 2968328..2968600 | + | 273 | WP_003900544.1 | hypothetical protein | - |
| CCDC5180_RS14090 () | 2968699..2968932 | + | 234 | WP_003413717.1 | hypothetical protein | - |
| CCDC5180_RS14095 () | 2968943..2969197 | + | 255 | WP_003413719.1 | hypothetical protein | - |
| CCDC5180_RS14100 () | 2969545..2969826 | + | 282 | WP_003899423.1 | hypothetical protein | - |
| CCDC5180_RS14105 () | 2969917..2970699 | + | 783 | Protein_2747 | IS256-like element IS1081 family transposase | - |
| CCDC5180_RS14110 () | 2970742..2971500 | + | 759 | WP_003413845.1 | ATP-dependent Clp protease ATP-binding subunit | - |
| CCDC5180_RS14115 () | 2971579..2972100 | + | 522 | WP_003899425.1 | hypothetical protein | - |
| CCDC5180_RS14120 () | 2972129..2972599 | + | 471 | WP_003413852.1 | N-acetyltransferase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Mycobacterium tuberculosis H37Rv | Prophage | TA120 | NC_000962 | 2970551..2980818 | 0.003 |