MGE detailed information
MGE type: Prophage MGE length: 49091 bp
Accession: NC_017342 Location: 1744780..1793870 Organism: Staphylococcus aureus subsp. aureus TCH60 Replicon: chromosome
Accession: NC_017342 Location: 1744780..1793870 Organism: Staphylococcus aureus subsp. aureus TCH60 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HMPREF0772_RS08825 () | 1739942..1740673 | + | 732 | WP_000273366.1 | segregation/condensation protein A | - |
| HMPREF0772_RS08830 () | 1740666..1741208 | + | 543 | WP_000368652.1 | SMC-Scp complex subunit ScpB | - |
| HMPREF0772_RS08835 () | 1741201..1741938 | + | 738 | WP_000159577.1 | rRNA pseudouridine synthase | - |
| HMPREF0772_RS08840 () | 1742071..1742796 | + | 726 | WP_000064078.1 | two-component system response regulator SrrA | - |
| HMPREF0772_RS08845 () | 1742777..1744528 | + | 1752 | WP_000987777.1 | two-component system sensor histidine kinase SrrB | - |
| HMPREF0772_RS08850 () | 1744780..1745712 | + | 933 | WP_001574168.1 | DUF1672 domain-containing protein | - |
| HMPREF0772_RS08855 () | 1745699..1747741 | + | 2043 | WP_000723489.1 | hypothetical protein | - |
| HMPREF0772_RS08860 () | 1747784..1748989 | - | 1206 | WP_000264747.1 | Transposase from transposon Tn916 ; Integrase | Integrase |
| HMPREF0772_RS08865 () | 1749115..1749729 | + | 615 | WP_000191459.1 | hypothetical protein | - |
| HMPREF0772_RS08870 () | 1749726..1749872 | - | 147 | WP_001013104.1 | hypothetical protein | - |
| HMPREF0772_RS08875 () | 1750102..1750686 | - | 585 | WP_000825948.1 | hypothetical protein | - |
| HMPREF0772_RS08880 () | 1750704..1751165 | - | 462 | WP_000525004.1 | hypothetical protein | Toxin Detail |
| HMPREF0772_RS08885 () | 1751178..1751492 | - | 315 | WP_000333630.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| HMPREF0772_RS08890 () | 1751644..1751880 | + | 237 | WP_001121027.1 | helix-turn-helix domain-containing protein | - |
| HMPREF0772_RS08895 () | 1751894..1752670 | + | 777 | WP_001148544.1 | Rha family transcriptional regulator | - |
| HMPREF0772_RS08900 () | 1752699..1752842 | + | 144 | WP_000939498.1 | hypothetical protein | - |
| HMPREF0772_RS08905 () | 1752832..1753041 | - | 210 | WP_000642492.1 | hypothetical protein | - |
| HMPREF0772_RS08910 () | 1753097..1753342 | + | 246 | WP_001025401.1 | DUF2829 domain-containing protein | Toxin Detail |
| HMPREF0772_RS08915 () | 1753311..1753676 | - | 366 | WP_001128433.1 | hypothetical protein | Antitoxin Detail |
| HMPREF0772_RS08920 () | 1753731..1753946 | + | 216 | WP_001036302.1 | hypothetical protein | - |
| HMPREF0772_RS08925 () | 1753971..1754234 | + | 264 | WP_001124190.1 | helix-turn-helix domain-containing protein | - |
| HMPREF0772_RS08930 () | 1754247..1754408 | + | 162 | WP_001285963.1 | DUF1270 family protein | - |
| HMPREF0772_RS08935 () | 1754487..1754810 | + | 324 | WP_000175000.1 | hypothetical protein | - |
| HMPREF0772_RS08940 () | 1754825..1755187 | + | 363 | WP_000279449.1 | hypothetical protein | - |
| HMPREF0772_RS08945 () | 1755184..1756350 | + | 1167 | WP_000762532.1 | DUF2800 domain-containing protein | - |
| HMPREF0772_RS08950 () | 1756376..1756933 | + | 558 | WP_000645042.1 | DUF2815 family protein | - |
| HMPREF0772_RS08955 () | 1757002..1758954 | + | 1953 | WP_001796208.1 | DNA polymerase | - |
| HMPREF0772_RS14675 () | 1758966..1759121 | + | 156 | WP_000152770.1 | helix-turn-helix transcriptional regulator | - |
| HMPREF0772_RS08960 () | 1759121..1759306 | + | 186 | WP_001187257.1 | DUF3113 family protein | - |
| HMPREF0772_RS08965 () | 1759307..1759660 | + | 354 | WP_000029383.1 | hypothetical protein | - |
| HMPREF0772_RS08970 () | 1759657..1759911 | + | 255 | WP_000022731.1 | DUF3310 domain-containing protein | - |
| HMPREF0772_RS08975 () | 1759911..1760159 | + | 249 | WP_014532979.1 | phi PVL orf 51-like protein | - |
| HMPREF0772_RS08980 () | 1760173..1760421 | + | 249 | WP_001065130.1 | DUF1024 family protein | - |
| HMPREF0772_RS08985 () | 1760414..1760947 | + | 534 | WP_001066432.1 | dUTP pyrophosphatase | - |
| HMPREF0772_RS15135 () | 1760984..1761136 | + | 153 | WP_000195790.1 | DUF1381 domain-containing protein | - |
| HMPREF0772_RS08995 () | 1761129..1761587 | + | 459 | WP_001129213.1 | hypothetical protein | - |
| HMPREF0772_RS09000 () | 1761600..1761752 | + | 153 | WP_000595260.1 | transcriptional activator RinB | - |
| HMPREF0772_RS09005 () | 1761820..1762020 | + | 201 | WP_000265258.1 | DUF1514 family protein | - |
| HMPREF0772_RS15260 () | 1762073..1764520 | + | 2448 | WP_000884853.1 | virulence-associated E family protein | - |
| HMPREF0772_RS09015 () | 1764623..1764727 | - | 105 | WP_015978074.1 | hypothetical protein | - |
| HMPREF0772_RS09020 () | 1764861..1765151 | + | 291 | WP_000665203.1 | VRR-NUC domain-containing protein | - |
| HMPREF0772_RS09025 () | 1765132..1766499 | + | 1368 | WP_014532980.1 | DEAD/DEAH box helicase | - |
| HMPREF0772_RS09030 () | 1766512..1766949 | + | 438 | WP_000513701.1 | transcriptional regulator | - |
| HMPREF0772_RS09035 () | 1767106..1767420 | + | 315 | WP_000160693.1 | HNH endonuclease | - |
| HMPREF0772_RS09040 () | 1767548..1767853 | + | 306 | WP_000778933.1 | P27 family phage terminase small subunit | - |
| HMPREF0772_RS09045 () | 1767843..1769534 | + | 1692 | WP_000153549.1 | terminase large subunit | - |
| HMPREF0772_RS09050 () | 1769539..1770777 | + | 1239 | WP_001100669.1 | phage portal protein | - |
| HMPREF0772_RS09055 () | 1770761..1771534 | + | 774 | WP_000061866.1 | Clp protease ClpP | - |
| HMPREF0772_RS09060 () | 1771546..1772709 | + | 1164 | WP_025173972.1 | phage major capsid protein | - |
| HMPREF0772_RS09065 () | 1772778..1773056 | + | 279 | WP_000050973.1 | head-tail connector protein | - |
| HMPREF0772_RS09070 () | 1773068..1773400 | + | 333 | WP_000395498.1 | hypothetical protein | - |
| HMPREF0772_RS09075 () | 1773397..1773798 | + | 402 | WP_000110023.1 | hypothetical protein | - |
| HMPREF0772_RS09080 () | 1773799..1774194 | + | 396 | WP_001023806.1 | DUF3168 domain-containing protein | - |
| HMPREF0772_RS09085 () | 1774229..1774870 | + | 642 | WP_000807536.1 | tail protein | - |
| HMPREF0772_RS09090 () | 1774962..1775417 | + | 456 | WP_000169128.1 | Ig domain-containing protein | - |
| HMPREF0772_RS09095 () | 1775475..1775816 | + | 342 | WP_000589166.1 | hypothetical protein | - |
| HMPREF0772_RS09100 () | 1775867..1776025 | + | 159 | WP_000438833.1 | hypothetical protein | - |
| HMPREF0772_RS09105 () | 1776039..1782239 | + | 6201 | WP_001003440.1 | phage tail tape measure protein | - |
| HMPREF0772_RS09110 () | 1782239..1783063 | + | 825 | WP_001190528.1 | phage tail family protein | - |
| HMPREF0772_RS09115 () | 1783072..1784655 | + | 1584 | WP_000384463.1 | prophage endopeptidase tail family protein | - |
| HMPREF0772_RS09120 () | 1784655..1784945 | + | 291 | WP_000179860.1 | hypothetical protein | - |
| HMPREF0772_RS09125 () | 1784961..1786871 | + | 1911 | WP_000429562.1 | hypothetical protein | - |
| HMPREF0772_RS09130 () | 1786871..1788337 | + | 1467 | WP_000067140.1 | BppU family phage baseplate upper protein | - |
| HMPREF0772_RS09135 () | 1788337..1788726 | + | 390 | WP_001166599.1 | DUF2977 domain-containing protein | - |
| HMPREF0772_RS09140 () | 1788719..1788883 | + | 165 | WP_000916020.1 | XkdX family protein | - |
| HMPREF0772_RS09145 () | 1788929..1789228 | + | 300 | WP_000466784.1 | DUF2951 domain-containing protein | - |
| HMPREF0772_RS09150 () | 1789364..1789666 | + | 303 | WP_000339141.1 | phage holin | - |
| HMPREF0772_RS09155 () | 1789677..1791131 | + | 1455 | WP_000909204.1 | N-acetylmuramoyl-L-alanine amidase | - |
| HMPREF0772_RS09160 () | 1791519..1792457 | + | 939 | WP_000239544.1 | Gamma-hemolysin component C | VF |
| HMPREF0772_RS09165 () | 1792453..1793436 | + | 984 | WP_024937002.1 | Leucotoxin LukDv | VF |
| HMPREF0772_RS09170 () | 1793685..1793870 | + | 186 | WP_000470336.1 | hypothetical protein | - |
| HMPREF0772_RS09175 () | 1793960..1794864 | + | 905 | Protein_1721 | DUF1672 domain-containing protein | - |
| HMPREF0772_RS09180 () | 1794922..1795836 | + | 915 | WP_000476887.1 | DUF1672 domain-containing protein | - |
| HMPREF0772_RS15145 () | 1795829..1795975 | + | 147 | WP_001033756.1 | hypothetical protein | - |
| HMPREF0772_RS09190 () | 1796050..1796970 | + | 921 | WP_000913246.1 | DUF1672 domain-containing protein | - |
| HMPREF0772_RS09195 () | 1797175..1797339 | + | 165 | WP_001799520.1 | hypothetical protein | - |
| HMPREF0772_RS09200 () | 1797618..1798163 | + | 546 | WP_001186908.1 | ECF transporter S component | - |
| HMPREF0772_RS09205 () | 1798269..1798517 | - | 249 | WP_001151997.1 | ferredoxin | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|