MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 93277 bp
Accession: NC_016864 Location: 1..93277 Organism: Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 Replicon: plasmid pSTUK-100
Accession: NC_016864 Location: 1..93277 Organism: Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1 Replicon: plasmid pSTUK-100
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| STMUK_RS25775 () | 484..780 | - | 297 | WP_001687482.1 | hypothetical protein | - |
| STMUK_RS23240 () | 1264..1785 | - | 522 | WP_010999942.1 | hypothetical protein | - |
| STMUK_RS23245 () | 2461..2679 | + | 219 | WP_000813641.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| STMUK_RS23250 () | 2681..2986 | + | 306 | WP_001159863.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| STMUK_RS23255 () | 2988..3278 | + | 291 | WP_001266176.1 | hypothetical protein | - |
| STMUK_RS23260 () | 3275..3796 | + | 522 | WP_000198608.1 | hypothetical protein | - |
| STMUK_RS23265 () | 3831..4613 | + | 783 | WP_000082169.1 | site-specific integrase | - |
| STMUK_RS23270 () | 4622..5335 | + | 714 | Protein_7 | EAL domain-containing protein | - |
| STMUK_RS23275 () | 5339..5848 | + | 510 | WP_001541544.1 | CaiF/GrlA family transcriptional regulator | - |
| STMUK_RS23280 () | 5842..6327 | + | 486 | WP_000905606.1 | membrane protein | - |
| STMUK_RS23285 () | 6580..6936 | + | 357 | Protein_10 | LysM peptidoglycan-binding domain-containing protein | - |
| STMUK_RS26200 () | 6934..7029 | + | 96 | Protein_11 | adenylate cyclase | - |
| STMUK_RS23290 () | 7096..7446 | - | 351 | WP_014344526.1 | helix-turn-helix domain-containing protein | - |
| STMUK_RS25315 () | 7503..7927 | + | 425 | Protein_13 | IS200/IS605 family transposase | - |
| STMUK_RS23300 () | 8054..8704 | - | 651 | WP_001575489.1 | SPI-2 type III secretion system effector cysteine hydrolase SpvD | - |
| STMUK_RS23305 () | 8965..9690 | - | 726 | WP_001122242.1 | type III secretion system effector phosphothreonine lyase SpvC | - |
| STMUK_RS23310 () | 9971..11740 | - | 1770 | WP_014344527.1 | SPI-2 type III secretion system effector NAD(+)--protein-arginine ADP-ribosyltransferase SpvB | - |
| STMUK_RS26205 () | 11792..11959 | - | 168 | WP_001526987.1 | hypothetical protein | - |
| STMUK_RS23315 () | 11922..12689 | - | 768 | WP_001526990.1 | virulence protein SpvA | - |
| STMUK_RS23320 () | 12863..13027 | - | 165 | WP_001576629.1 | glycoside hydrolase family protein | - |
| STMUK_RS23325 () | 13201..14094 | - | 894 | WP_000346691.1 | virulence genes transcriptional activator SpvR | - |
| STMUK_RS23330 () | 14702..15739 | + | 1038 | WP_001121399.1 | IS630 family transposase | - |
| STMUK_RS23335 () | 15928..16953 | - | 1026 | WP_001576625.1 | ExeA family protein | - |
| STMUK_RS23340 () | 16886..18550 | - | 1665 | WP_000098783.1 | IS481 family transposase | - |
| STMUK_RS23345 () | 18534..19094 | - | 561 | WP_001240331.1 | recombinase family protein | - |
| STMUK_RS23350 () | 19301..20041 | - | 741 | WP_001541566.1 | carbonic anhydrase | - |
| STMUK_RS23355 () | 20696..21184 | - | 489 | WP_001135407.1 | hypothetical protein | - |
| STMUK_RS23360 () | 21443..22558 | + | 1116 | WP_001247118.1 | DNA-binding protein | - |
| STMUK_RS23365 () | 22644..23060 | + | 417 | WP_001541564.1 | hypothetical protein | - |
| STMUK_RS23370 () | 23244..23579 | + | 336 | WP_001527010.1 | hypothetical protein | - |
| STMUK_RS23375 () | 23636..24202 | + | 567 | WP_001541562.1 | DUF2913 family protein | - |
| STMUK_RS23380 () | 24234..25175 | - | 942 | WP_000728917.1 | Rpn family recombination-promoting nuclease/putative transposase | - |
| STMUK_RS23385 () | 25590..26795 | + | 1206 | WP_000427676.1 | AAA family ATPase | - |
| STMUK_RS23390 () | 26795..27769 | + | 975 | WP_000064274.1 | ParB/RepB/Spo0J family partition protein | - |
| STMUK_RS23395 () | 27851..29125 | - | 1275 | WP_000457541.1 | Y-family DNA polymerase | - |
| STMUK_RS23400 () | 29125..29547 | - | 423 | WP_000925627.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| STMUK_RS25785 () | 30058..30528 | + | 471 | WP_000490265.1 | hypothetical protein | - |
| STMUK_RS23410 () | 30521..30877 | + | 357 | WP_000369839.1 | hypothetical protein | - |
| STMUK_RS23420 () | 31259..31939 | + | 681 | WP_000088645.1 | DNA methylase | - |
| STMUK_RS23425 () | 31939..32160 | + | 222 | WP_001109588.1 | hypothetical protein | - |
| STMUK_RS23430 () | 32216..32629 | + | 414 | WP_000990114.1 | DUF1380 family protein | - |
| STMUK_RS23435 () | 32701..33465 | + | 765 | WP_001246548.1 | membrane protein | - |
| STMUK_RS23440 () | 33961..34395 | + | 435 | WP_001200150.1 | antirestriction protein | - |
| STMUK_RS23445 () | 34462..34896 | + | 435 | WP_000274533.1 | DUF1380 family protein | - |
| STMUK_RS23450 () | 35132..35455 | + | 324 | WP_000015983.1 | DNA polymerase III subunit theta | - |
| STMUK_RS26125 () | 35419..35592 | + | 174 | WP_155522194.1 | hypothetical protein | - |
| STMUK_RS23460 () | 36186..36704 | + | 519 | WP_000741240.1 | single-stranded DNA-binding protein SSB2 | - |
| STMUK_RS23465 () | 36759..37001 | + | 243 | WP_000131520.1 | DUF905 domain-containing protein | - |
| STMUK_RS23470 () | 37070..39067 | + | 1998 | WP_000117513.1 | ParB/RepB/Spo0J family partition protein | - |
| STMUK_RS23475 () | 39107..39541 | + | 435 | WP_010999943.1 | conjugation system SOS inhibitor PsiB | - |
| STMUK_RS23480 () | 39538..40275 | + | 738 | WP_000581933.1 | plasmid SOS inhibition protein A | - |
| STMUK_RS26140 () | 40524..40682 | + | 159 | WP_001704449.1 | hypothetical protein | - |
| STMUK_RS26210 () | 40785..41603 | + | 819 | Protein_52 | DUF945 domain-containing protein | - |
| STMUK_RS23495 () | 41914..42384 | - | 471 | WP_001526856.1 | transglycosylase SLT domain-containing protein | - |
| STMUK_RS23500 () | 42799..43179 | + | 381 | WP_001151546.1 | relaxosome protein TraM | - |
| STMUK_RS23505 () | 43372..44058 | + | 687 | WP_000336297.1 | PAS domain-containing protein | - |
| STMUK_RS25350 () | 44152..44379 | + | 228 | WP_001676655.1 | conjugal transfer relaxosome protein TraY | - |
| STMUK_RS23510 () | 44421..44783 | + | 363 | WP_001274201.1 | type IV conjugative transfer system pilin TraA | - |
| STMUK_RS23515 () | 44798..45109 | + | 312 | WP_000012129.1 | type IV conjugative transfer system protein TraL | - |
| STMUK_RS23520 () | 45131..45697 | + | 567 | WP_000399768.1 | type IV conjugative transfer system protein TraE | - |
| STMUK_RS23525 () | 45684..46424 | + | 741 | WP_001230719.1 | type-F conjugative transfer system secretin TraK | - |
| STMUK_RS23530 () | 46424..47845 | + | 1422 | WP_000146700.1 | conjugal transfer protein TraB | - |
| STMUK_RS23535 () | 47835..48431 | + | 597 | WP_000527896.1 | conjugal transfer protein TraP | - |
| STMUK_RS23540 () | 48409..48654 | + | 246 | WP_010999944.1 | DUF2689 domain-containing protein | - |
| STMUK_RS23545 () | 48651..49166 | + | 516 | WP_001079995.1 | type IV conjugative transfer system lipoprotein TraV | - |
| STMUK_RS23550 () | 49301..49522 | + | 222 | WP_001278699.1 | conjugal transfer protein TraR | - |
| STMUK_RS23555 () | 49515..49982 | + | 468 | WP_000549562.1 | hypothetical protein | - |
| STMUK_RS23560 () | 50099..50362 | + | 264 | WP_001239255.1 | hypothetical protein | - |
| STMUK_RS23565 () | 50378..53026 | + | 2649 | WP_000793310.1 | type IV secretion system protein TraC | - |
| STMUK_RS23570 () | 53001..53387 | + | 387 | WP_000105164.1 | type-F conjugative transfer system protein TrbI | - |
| STMUK_RS23575 () | 53384..54016 | + | 633 | WP_000871995.1 | type-F conjugative transfer system protein TraW | - |
| STMUK_RS23580 () | 54013..55005 | + | 993 | WP_000833320.1 | conjugal transfer pilus assembly protein TraU | - |
| STMUK_RS23585 () | 55024..55332 | + | 309 | WP_010999945.1 | hypothetical protein | - |
| STMUK_RS23590 () | 55317..55955 | + | 639 | WP_000554823.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| STMUK_RS23595 () | 55992..56411 | + | 420 | WP_001229397.1 | HNH endonuclease | - |
| STMUK_RS23600 () | 56408..58234 | + | 1827 | WP_000827528.1 | type-F conjugative transfer system mating-pair stabilization protein TraN | - |
| STMUK_RS23605 () | 58245..58460 | + | 216 | WP_000700023.1 | conjugal transfer protein TrbE | - |
| STMUK_RS23610 () | 58472..59221 | + | 750 | WP_001226854.1 | type-F conjugative transfer system pilin assembly protein TraF | - |
| STMUK_RS23615 () | 59435..59728 | + | 294 | WP_001233881.1 | type-F conjugative transfer system pilin chaperone TraQ | - |
| STMUK_RS23620 () | 59715..60263 | + | 549 | WP_000055839.1 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | - |
| STMUK_RS23625 () | 60253..61635 | + | 1383 | WP_001161719.1 | conjugal transfer protein TraH | - |
| STMUK_RS23630 () | 61632..64454 | + | 2823 | WP_001007086.1 | conjugal transfer mating pair stabilization protein TraG | - |
| STMUK_RS23635 () | 64470..64964 | + | 495 | WP_010999946.1 | entry exclusion protein | - |
| STMUK_RS23640 () | 65000..65731 | + | 732 | WP_000782438.1 | complement resistance protein TraT | - |
| STMUK_RS23645 () | 66108..68270 | + | 2163 | WP_000009318.1 | type IV conjugative transfer system coupling protein TraD | - |
| STMUK_RS23650 () | 68279..68677 | - | 399 | WP_000911322.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| STMUK_RS23655 () | 68677..68904 | - | 228 | WP_000450265.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| STMUK_RS23660 () | 68986..74244 | + | 5259 | WP_000986921.1 | conjugative transfer relaxase/helicase TraI | - |
| STMUK_RS23665 () | 74264..75004 | + | 741 | WP_000177629.1 | conjugal transfer pilus acetylase TraX | - |
| STMUK_RS23670 () | 75059..75622 | + | 564 | WP_000139307.1 | fertility inhibition protein FinO | - |
| STMUK_RS23675 () | 75737..76021 | + | 285 | WP_000477658.1 | hypothetical protein | - |
| STMUK_RS23680 () | 76034..76189 | + | 156 | WP_000983042.1 | hypothetical protein | - |
| STMUK_RS23685 () | 76355..76797 | + | 443 | Protein_92 | phospholipase | - |
| STMUK_RS23690 () | 76976..77242 | + | 267 | WP_010999936.1 | replication regulatory protein RepA | - |
| STMUK_RS23700 () | 77492..77569 | + | 78 | WP_001541552.1 | RepA leader peptide Tap | - |
| STMUK_RS23705 () | 77550..78431 | + | 882 | WP_001738692.1 | incFII family plasmid replication initiator RepA | - |
| STMUK_RS25360 () | 79291..79512 | + | 222 | WP_071533052.1 | SdiA-regulated domain-containing protein | - |
| STMUK_RS23710 () | 79609..80367 | - | 759 | WP_000417898.1 | AraC family transcriptional regulator | - |
| STMUK_RS23715 () | 80634..81191 | - | 558 | WP_000725062.1 | complement resistance protein Rck | - |
| STMUK_RS23720 () | 81281..82180 | - | 900 | WP_010999938.1 | YjiK family protein | - |
| STMUK_RS26215 () | 82177..82323 | - | 147 | WP_001192557.1 | hypothetical protein | - |
| STMUK_RS23725 () | 82313..82966 | - | 654 | WP_000178592.1 | DsbA family protein | - |
| STMUK_RS23730 () | 83211..83561 | - | 351 | WP_001526811.1 | helix-turn-helix transcriptional regulator | - |
| STMUK_RS23735 () | 83546..83758 | - | 213 | WP_000004313.1 | transcriptional regulator PefI | - |
| STMUK_RS23740 () | 84190..85065 | - | 876 | WP_014343944.1 | hypothetical protein | - |
| STMUK_RS23745 () | 85318..85875 | - | 558 | WP_010999940.1 | membrane protein | - |
| STMUK_RS23750 () | 85890..86582 | - | 693 | WP_001038510.1 | fimbrial chaperone PefD | - |
| STMUK_RS23755 () | 86575..88983 | - | 2409 | WP_000007893.1 | outer membrane usher protein PefC | - |
| STMUK_RS23760 () | 89211..89729 | - | 519 | WP_000748205.1 | major pilin PefA | - |
| STMUK_RS23765 () | 90004..90306 | - | 303 | WP_000979451.1 | transcriptional regulator PefB | - |
| STMUK_RS23770 () | 91025..91406 | + | 382 | Protein_110 | YgiW/YdeI family stress tolerance OB fold protein | - |
| STMUK_RS26075 () | 91575..92019 | + | 445 | Protein_111 | site-specific integrase | - |
| STMUK_RS23780 () | 92278..93267 | - | 990 | WP_001527061.1 | RepB family plasmid replication initiator protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|