MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 41551 bp
Accession: NC_016111 Location: 4200367..4241917 Organism: Streptomyces cattleya NRRL 8057 = DSM 46488 Replicon: chromosome
Accession: NC_016111 Location: 4200367..4241917 Organism: Streptomyces cattleya NRRL 8057 = DSM 46488 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SCAT_RS26680 () | 4195683..4196447 | - | 765 | WP_014144635.1 | ROK family protein | - |
| SCAT_RS26685 () | 4196528..4197502 | - | 975 | WP_078590785.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| SCAT_RS26690 () | 4197632..4199053 | + | 1422 | WP_014144637.1 | APC family permease | - |
| SCAT_RS26695 () | 4199170..4200258 | + | 1089 | WP_014144638.1 | redox-regulated ATPase YchF | - |
| SCAT_RS26700 () | 4200367..4201485 | - | 1119 | WP_014144639.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| SCAT_RS26705 () | 4201510..4202010 | - | 501 | WP_014144640.1 | helix-turn-helix domain-containing protein | - |
| SCAT_RS26710 () | 4202132..4202326 | + | 195 | WP_014144641.1 | helix-turn-helix domain-containing protein | - |
| SCAT_RS26715 () | 4202847..4204100 | + | 1254 | WP_014144643.1 | DUF3631 domain-containing protein | - |
| SCAT_RS26720 () | 4204416..4204967 | + | 552 | WP_014144644.1 | hypothetical protein | - |
| SCAT_RS26725 () | 4204957..4206654 | + | 1698 | WP_014144645.1 | hypothetical protein | - |
| SCAT_RS26730 () | 4206746..4206976 | + | 231 | WP_014628305.1 | Tn3 family transposase | - |
| SCAT_RS26735 () | 4207110..4208330 | - | 1221 | WP_014144647.1 | hypothetical protein | - |
| SCAT_RS26740 () | 4208631..4209176 | - | 546 | WP_014144648.1 | hypothetical protein | - |
| SCAT_RS26745 () | 4209212..4209904 | - | 693 | WP_014144649.1 | class I SAM-dependent methyltransferase | - |
| SCAT_RS26750 () | 4209906..4210817 | - | 912 | WP_014144650.1 | phosphotransferase | - |
| SCAT_RS26755 () | 4210899..4211648 | - | 750 | WP_014144651.1 | hypothetical protein | - |
| SCAT_RS26760 () | 4211872..4213227 | + | 1356 | WP_014144652.1 | hypothetical protein | - |
| SCAT_RS26765 () | 4213229..4213759 | + | 531 | WP_014144653.1 | NUDIX domain-containing protein | - |
| SCAT_RS26770 () | 4213890..4214717 | + | 828 | WP_014144654.1 | TIGR04255 family protein | - |
| SCAT_RS26775 () | 4215423..4216385 | + | 963 | WP_157894840.1 | hypothetical protein | - |
| SCAT_RS26780 () | 4216693..4216956 | - | 264 | WP_014144656.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SCAT_RS26785 () | 4216949..4217218 | - | 270 | WP_014628308.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| SCAT_RS26790 () | 4217400..4218818 | + | 1419 | WP_014144658.1 | ATP-binding protein | - |
| SCAT_RS26795 () | 4218939..4220651 | + | 1713 | WP_014142185.1 | IS1182 family transposase ISAcma46 | Transposase |
| SCAT_RS38910 () | 4220776..4221129 | + | 354 | WP_014144659.1 | hypothetical protein | - |
| SCAT_RS26805 () | 4221137..4222942 | + | 1806 | WP_014144660.1 | hypothetical protein | - |
| SCAT_RS26810 () | 4222942..4223826 | + | 885 | WP_014144661.1 | hypothetical protein | - |
| SCAT_RS26815 () | 4223838..4225268 | - | 1431 | WP_014144662.1 | APC family permease | - |
| SCAT_RS26820 () | 4225723..4226475 | + | 753 | WP_014144664.1 | GntR family transcriptional regulator | - |
| SCAT_RS26825 () | 4226916..4228541 | + | 1626 | WP_014144665.1 | APC family permease | - |
| SCAT_RS26830 () | 4228736..4229182 | + | 447 | WP_014144666.1 | RpiB/LacA/LacB family sugar-phosphate isomerase | - |
| SCAT_RS37975 () | 4229182..4229352 | + | 171 | WP_014144667.1 | SPOR domain-containing protein | - |
| SCAT_RS26835 () | 4229767..4230162 | + | 396 | WP_014144668.1 | RNA pyrophosphohydrolase | VF |
| SCAT_RS26840 () | 4230275..4232803 | + | 2529 | WP_014144669.1 | SpoIIE family protein phosphatase | - |
| SCAT_RS26845 () | 4233053..4235344 | + | 2292 | WP_014144670.1 | SpoIIE family protein phosphatase | - |
| SCAT_RS26850 () | 4235351..4236175 | - | 825 | WP_014144671.1 | succinate dehydrogenase/fumarate reductase iron-sulfur subunit | - |
| SCAT_RS26855 () | 4236175..4238112 | - | 1938 | WP_014144672.1 | fumarate reductase/succinate dehydrogenase flavoprotein subunit | - |
| SCAT_RS26860 () | 4238132..4238953 | - | 822 | WP_173405734.1 | hypothetical protein | - |
| SCAT_RS26865 () | 4239043..4239354 | - | 312 | WP_014144674.1 | hypothetical protein | - |
| SCAT_RS26870 () | 4239749..4241917 | + | 2169 | WP_014144675.1 | ABC transporter family substrate-binding protein | - |
| SCAT_RS26875 () | 4242070..4243974 | + | 1905 | WP_014144676.1 | translational GTPase TypA | - |
| SCAT_RS26880 () | 4244130..4244546 | - | 417 | WP_014144677.1 | ATP-binding protein | - |
| SCAT_RS26885 () | 4244681..4245565 | + | 885 | WP_078590787.1 | helix-turn-helix domain-containing protein | - |
| SCAT_RS26890 () | 4245576..4245779 | + | 204 | WP_014144680.1 | DUF397 domain-containing protein | - |
| SCAT_RS26895 () | 4245876..4246235 | + | 360 | WP_014144681.1 | hypothetical protein | - |
| SCAT_RS26900 () | 4246232..4246480 | + | 249 | WP_106433141.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptomyces cattleya NRRL 8057 = DSM 46488 | Integrative and Conjugative Element | TA6285 | NC_017586 | 4200177..4241727 | 0 |