MGE detailed information
MGE type: Prophage MGE length: 17216 bp
Accession: NC_014228 Location: 163359..180574 Organism: Xenorhabdus nematophila ATCC 19061 Replicon: chromosome
Accession: NC_014228 Location: 163359..180574 Organism: Xenorhabdus nematophila ATCC 19061 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XNC1_RS00770 (XNC1_0172) | 159165..160283 | - | 1119 | WP_013183136.1 | glycosyltransferase family 4 protein | - |
| XNC1_RS00775 (XNC1_0173) | 160440..160607 | - | 168 | WP_010847629.1 | 50S ribosomal protein L33 | - |
| XNC1_RS00780 (XNC1_0174) | 160619..160855 | - | 237 | WP_010847630.1 | 50S ribosomal protein L28 | - |
| XNC1_RS00785 (XNC1_0176) | 161117..161809 | - | 693 | WP_010847631.1 | DNA repair protein RadC | - |
| XNC1_RS00790 (XNC1_0177) | 162152..163381 | + | 1230 | WP_013183138.1 | bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC | - |
| XNC1_RS00795 (XNC1_0178) | 163359..163817 | + | 459 | WP_013183139.1 | dUTP diphosphatase | - |
| XNC1_RS00800 (XNC1_0179) | 163962..164561 | + | 600 | WP_013183140.1 | nucleoid occlusion factor SlmA | - |
| XNC1_RS00805 (XNC1_0180) | 164816..165457 | - | 642 | WP_010847635.1 | orotate phosphoribosyltransferase | - |
| XNC1_RS00810 (XNC1_0181) | 165534..166277 | - | 744 | WP_010847636.1 | ribonuclease PH | - |
| XNC1_RS00815 (XNC1_0182) | 166403..167266 | + | 864 | WP_013183141.1 | YicC family protein | - |
| XNC1_RS00820 (XNC1_0183) | 167366..168130 | + | 765 | WP_013183142.1 | hypothetical protein ; Integrase | Integrase |
| XNC1_RS00825 (XNC1_0184) | 168127..168873 | + | 747 | WP_013183143.1 | hypothetical protein | - |
| XNC1_RS00830 (XNC1_0185) | 169267..169509 | + | 243 | WP_013183144.1 | IS607 family transposase ISC1913 | Transposase |
| XNC1_RS00835 (XNC1_0186) | 169643..170482 | + | 840 | WP_013183145.1 | hypothetical protein | - |
| XNC1_RS00840 (XNC1_0187) | 170505..171524 | + | 1020 | WP_013183146.1 | P2 family phage major capsid protein | - |
| XNC1_RS00845 (XNC1_0188) | 171521..172042 | + | 522 | WP_013183147.1 | GPO family capsid scaffolding protein | - |
| XNC1_RS00850 (XNC1_0189) | 172114..172626 | + | 513 | WP_013183148.1 | host cell division inhibitor Icd-like protein | - |
| XNC1_RS00855 (XNC1_0190) | 172629..172847 | + | 219 | WP_013183149.1 | hypothetical protein | - |
| XNC1_RS00860 (XNC1_0191) | 172847..175561 | + | 2715 | WP_013183150.1 | TOPRIM and DUF927 domain-containing protein | - |
| XNC1_RS20870 (XNC1_0192) | 175853..176065 | + | 213 | WP_013183151.1 | ogr/Delta-like zinc finger family protein | - |
| XNC1_RS00865 (XNC1_0195) | 176775..177590 | + | 816 | WP_010847649.1 | DNA damage-inducible protein D | - |
| XNC1_RS00870 | 177929..178489 | + | 561 | Protein_171 | DUF4102 domain-containing protein | - |
| XNC1_RS00875 (XNC1_0201) | 178697..179737 | - | 1041 | WP_013141539.1 | IS481 family transposase ISVvu4 | Transposase |
| XNC1_RS00880 (XNC1_0202) | 179958..180179 | + | 222 | WP_010847654.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| XNC1_RS00885 (XNC1_0203) | 180176..180574 | + | 399 | WP_013183155.1 | type II toxin-antitoxin system death-on-curing family toxin | Toxin Detail |
| XNC1_RS00890 | 180816..181715 | - | 900 | Protein_175 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| XNC1_RS00895 (XNC1_0206) | 181778..182554 | - | 777 | WP_010847657.1 | type IV toxin-antitoxin system AbiEi family antitoxin | - |
| XNC1_RS00900 (XNC1_0208) | 183070..183837 | - | 768 | WP_013183157.1 | triose-phosphate isomerase | - |
| XNC1_RS00905 (XNC1_0209) | 183926..184546 | - | 621 | WP_013183158.1 | DUF1454 family protein | - |
| XNC1_RS00910 (XNC1_0210) | 184605..185051 | + | 447 | WP_041573628.1 | DUF805 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xenorhabdus nematophila AN6/1 | Prophage | TA285547 | NZ_LN681227 | 163360..180575 | 0 |