MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 140572 bp
Accession: NC_013943 Location: 550061..690632 Organism: Denitrovibrio acetiphilus DSM 12809 Replicon: chromosome
Accession: NC_013943 Location: 550061..690632 Organism: Denitrovibrio acetiphilus DSM 12809 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DACET_RS02660 () | 546094..547251 | - | 1158 | WP_013009871.1 | site-specific integrase | - |
| DACET_RS02665 () | 547262..547501 | - | 240 | WP_148214132.1 | hypothetical protein | - |
| DACET_RS02670 () | 547525..547707 | - | 183 | WP_013009873.1 | hypothetical protein | - |
| DACET_RS15325 () | 547783..548232 | - | 450 | WP_013009874.1 | helix-turn-helix transcriptional regulator | - |
| DACET_RS02680 () | 548362..548562 | + | 201 | WP_013009875.1 | hypothetical protein | - |
| DACET_RS15330 () | 548555..550930 | + | 2376 | WP_013009876.1 | sigma-70 family RNA polymerase sigma factor | - |
| DACET_RS02690 () | 551022..551492 | + | 471 | WP_013009877.1 | mobile mystery protein A | - |
| DACET_RS02695 () | 551556..552338 | - | 783 | WP_013009878.1 | hypothetical protein | - |
| DACET_RS02705 () | 553783..554811 | + | 1029 | WP_013009879.1 | hypothetical protein | - |
| DACET_RS02710 () | 554808..555233 | + | 426 | WP_013009880.1 | hypothetical protein | - |
| DACET_RS02715 () | 555226..555738 | - | 513 | WP_013009881.1 | hypothetical protein | - |
| DACET_RS02720 () | 555735..556136 | - | 402 | WP_013009882.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| DACET_RS02725 () | 556139..556366 | - | 228 | WP_013009883.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| DACET_RS02730 () | 556675..557901 | - | 1227 | WP_013009884.1 | type II toxin-antitoxin system HipA family toxin | - |
| DACET_RS02735 () | 557898..558218 | - | 321 | WP_211204116.1 | helix-turn-helix domain-containing protein | - |
| DACET_RS02740 () | 558413..559369 | + | 957 | WP_013009886.1 | ParM/StbA family protein | - |
| DACET_RS02745 () | 559438..559674 | + | 237 | WP_013009887.1 | hypothetical protein | - |
| DACET_RS02750 () | 559674..559883 | + | 210 | WP_013009888.1 | helix-turn-helix transcriptional regulator | - |
| DACET_RS02755 () | 559933..560877 | + | 945 | WP_013009889.1 | hypothetical protein | - |
| DACET_RS02760 () | 560866..562083 | - | 1218 | WP_013009890.1 | IS256 family transposase ISDku1 | Transposase |
| DACET_RS02765 () | 562179..562505 | - | 327 | WP_013009891.1 | hypothetical protein | - |
| DACET_RS02770 () | 562507..563718 | - | 1212 | WP_013009892.1 | hypothetical protein | - |
| DACET_RS02775 () | 563867..564166 | + | 300 | WP_013009893.1 | hypothetical protein | - |
| DACET_RS02780 () | 564166..564435 | + | 270 | WP_013009894.1 | type IV conjugative transfer system protein TraL | - |
| DACET_RS02785 () | 564438..564995 | + | 558 | WP_013009895.1 | hypothetical protein | - |
| DACET_RS02790 () | 564992..565705 | + | 714 | WP_013009896.1 | type-F conjugative transfer system secretin TraK | - |
| DACET_RS02795 () | 565702..566877 | + | 1176 | WP_013009897.1 | TraB/VirB10 family protein | - |
| DACET_RS02800 () | 566856..567263 | + | 408 | WP_013009898.1 | TraV family lipoprotein | - |
| DACET_RS02805 () | 567260..570034 | + | 2775 | WP_013009899.1 | Protein TraC | VF |
| DACET_RS02810 () | 570034..570333 | + | 300 | WP_041229817.1 | hypothetical protein | - |
| DACET_RS15335 () | 570351..570983 | + | 633 | WP_148214133.1 | hypothetical protein | - |
| DACET_RS02820 () | 570940..571941 | + | 1002 | WP_013009902.1 | TraU family protein | - |
| DACET_RS02825 () | 571911..572645 | + | 735 | WP_013009903.1 | conjugal transfer protein TraF | - |
| DACET_RS02830 () | 572727..572942 | + | 216 | WP_013009904.1 | hypothetical protein | - |
| DACET_RS02835 () | 572939..573139 | - | 201 | WP_013009905.1 | hypothetical protein | - |
| DACET_RS02840 () | 573117..576848 | - | 3732 | WP_013009906.1 | conjugal transfer protein TraG N-terminal domain-containing protein | - |
| DACET_RS15340 () | 576848..578209 | - | 1362 | WP_013009907.1 | conjugal transfer protein TraH | - |
| DACET_RS16100 () | 578330..578467 | + | 138 | WP_211204097.1 | hypothetical protein | - |
| DACET_RS02850 () | 578467..579513 | + | 1047 | WP_013009908.1 | virulence RhuM family protein | - |
| DACET_RS02855 () | 579563..580153 | + | 591 | WP_013009909.1 | hypothetical protein | - |
| DACET_RS02860 () | 580189..580683 | - | 495 | WP_041229818.1 | 3'-5' exonuclease | - |
| DACET_RS02865 () | 580736..581656 | - | 921 | WP_013009911.1 | WYL domain-containing protein | - |
| DACET_RS02870 () | 581962..583452 | + | 1491 | WP_169304173.1 | hypothetical protein | - |
| DACET_RS02875 () | 583467..585761 | + | 2295 | WP_013009913.1 | phosphoadenosine phosphosulfate reductase family protein | - |
| DACET_RS02880 () | 585751..589881 | + | 4131 | WP_013009914.1 | hypothetical protein | - |
| DACET_RS02885 () | 589889..592138 | + | 2250 | WP_013009915.1 | BREX-4 system phosphatase PglZ | - |
| DACET_RS02890 () | 592150..593592 | + | 1443 | WP_013009916.1 | BREX system Lon protease-like protein BrxL | - |
| DACET_RS02895 () | 593597..593797 | + | 201 | WP_013009917.1 | hypothetical protein | - |
| DACET_RS02900 () | 593967..594452 | - | 486 | WP_211204098.1 | hypothetical protein | - |
| DACET_RS02905 () | 594376..594747 | - | 372 | WP_013009919.1 | hypothetical protein | - |
| DACET_RS02910 () | 594744..595121 | - | 378 | WP_013009920.1 | hypothetical protein | - |
| DACET_RS02915 () | 595132..595782 | - | 651 | WP_169304174.1 | ImmA/IrrE family metallo-endopeptidase | - |
| DACET_RS16205 () | 595810..595995 | + | 186 | WP_169304175.1 | hypothetical protein | - |
| DACET_RS02920 () | 596053..596622 | - | 570 | WP_013009922.1 | hypothetical protein | - |
| DACET_RS02925 () | 597000..599225 | + | 2226 | WP_041229821.1 | hypothetical protein | - |
| DACET_RS02935 () | 600031..601554 | + | 1524 | WP_041229826.1 | hypothetical protein | - |
| DACET_RS15345 () | 601518..602414 | + | 897 | WP_083772334.1 | DUF4062 domain-containing protein | - |
| DACET_RS02945 () | 602421..602726 | - | 306 | WP_013009925.1 | hypothetical protein | - |
| DACET_RS02950 () | 602713..603417 | - | 705 | WP_013009926.1 | hypothetical protein | - |
| DACET_RS02955 () | 603410..603625 | - | 216 | WP_013009927.1 | hypothetical protein | - |
| DACET_RS02960 () | 603634..605802 | - | 2169 | WP_013009928.1 | hypothetical protein | - |
| DACET_RS02965 () | 605792..606526 | - | 735 | WP_013009929.1 | type-F conjugative transfer system pilin assembly protein TrbC | - |
| DACET_RS15350 () | 606486..606923 | - | 438 | WP_013009930.1 | S26 family signal peptidase | - |
| DACET_RS15355 () | 606923..610228 | - | 3306 | WP_013009931.1 | conjugal transfer protein TraN | - |
| DACET_RS02980 () | 610225..611874 | - | 1650 | WP_013009932.1 | metal-dependent hydrolase | - |
| DACET_RS02985 () | 611871..613175 | - | 1305 | WP_013009933.1 | hypothetical protein | VF |
| DACET_RS02990 () | 613223..613504 | + | 282 | WP_013009934.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| DACET_RS02995 () | 613535..613819 | + | 285 | WP_041230094.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| DACET_RS03000 () | 613828..614511 | - | 684 | WP_013009936.1 | hypothetical protein | - |
| DACET_RS03005 () | 614502..614696 | - | 195 | WP_013009937.1 | hypothetical protein | - |
| DACET_RS03010 () | 614763..615104 | - | 342 | WP_013009938.1 | single-stranded DNA-binding protein | - |
| DACET_RS03015 () | 615244..617292 | + | 2049 | WP_013009939.1 | putative Ig domain-containing protein | - |
| DACET_RS03020 () | 617435..618820 | + | 1386 | WP_013009940.1 | hypothetical protein | - |
| DACET_RS03025 () | 618898..620187 | + | 1290 | WP_013009941.1 | ATP-binding protein | - |
| DACET_RS03030 () | 620249..621118 | - | 870 | WP_013009942.1 | nucleotidyl transferase AbiEii/AbiGii toxin family protein | - |
| DACET_RS03035 () | 621111..621749 | - | 639 | WP_013009943.1 | hypothetical protein | - |
| DACET_RS03040 () | 621897..622148 | + | 252 | WP_013009944.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | - |
| DACET_RS03045 () | 622117..622458 | + | 342 | WP_148214138.1 | mRNA interferase toxin RelE ; Integrase | Integrase |
| DACET_RS03050 () | 622672..623871 | - | 1200 | WP_013009946.1 | Putative defective protein IntQ ; Integrase | Integrase |
| DACET_RS03055 () | 623900..624130 | - | 231 | WP_013009947.1 | helix-turn-helix domain-containing protein | - |
| DACET_RS03060 () | 624853..626283 | - | 1431 | WP_013009948.1 | hypothetical protein | - |
| DACET_RS03065 () | 626410..626643 | + | 234 | WP_013009949.1 | helix-turn-helix domain-containing protein | - |
| DACET_RS16425 () | 626920..627645 | + | 726 | WP_041229830.1 | IS481 family transposase ISCce1 | Transposase |
| DACET_RS03075 () | 627710..627919 | - | 210 | WP_013009951.1 | hypothetical protein | - |
| DACET_RS16210 () | 628316..628489 | + | 174 | WP_013009953.1 | hypothetical protein | - |
| DACET_RS03080 () | 628610..628834 | + | 225 | WP_013009954.1 | hypothetical protein | - |
| DACET_RS03085 () | 629024..629890 | + | 867 | WP_148214214.1 | WYL domain-containing protein | - |
| DACET_RS03090 () | 630090..630512 | + | 423 | WP_013009957.1 | DUF1232 domain-containing protein | - |
| DACET_RS03095 () | 630662..632395 | + | 1734 | WP_013009958.1 | dynamin family protein | - |
| DACET_RS03100 () | 632398..634722 | + | 2325 | WP_013009959.1 | dynamin family protein | - |
| DACET_RS03105 () | 634722..636224 | + | 1503 | WP_013009960.1 | dynamin family protein | - |
| DACET_RS16430 () | 636407..636559 | + | 153 | WP_083772448.1 | 5'-nucleotidase | - |
| DACET_RS03110 () | 636625..636891 | + | 267 | WP_013009961.1 | IS3 family transposase ISLpn8 | Transposase |
| DACET_RS03115 () | 636942..637412 | + | 471 | WP_052293493.1 | IS3 family transposase ISSse3 | Transposase |
| DACET_RS03120 () | 637397..637789 | + | 393 | WP_052293494.1 | Tn3 family transposase TnpR_Tn5403 | Transposase |
| DACET_RS03125 () | 637840..638592 | + | 753 | Protein_625 | IS256 family transposase ISCcl1 | Transposase |
| DACET_RS03130 () | 638714..638980 | - | 267 | Protein_626 | ATP-binding protein | - |
| DACET_RS03135 () | 639038..639610 | - | 573 | WP_013009962.1 | YdcF family protein | - |
| DACET_RS03140 () | 639623..640279 | - | 657 | WP_013009963.1 | Linear gramicidin synthase subunit A | VF |
| DACET_RS03145 () | 640284..641318 | - | 1035 | WP_013009964.1 | Pseudaminic acid synthase | VF |
| DACET_RS03150 () | 641452..642852 | + | 1401 | WP_013009965.1 | IS4 family transposase ISGur1 | Transposase |
| DACET_RS03155 () | 642948..644003 | + | 1056 | WP_013009966.1 | hypothetical protein | VF |
| DACET_RS03160 () | 644003..644488 | + | 486 | WP_013009967.1 | hypothetical protein | - |
| DACET_RS03165 () | 644630..645844 | + | 1215 | WP_013009968.1 | IS256 family transposase ISDku1 | Transposase |
| DACET_RS03175 () | 646168..646941 | - | 774 | WP_013009969.1 | hypothetical protein | - |
| DACET_RS03180 () | 647069..648283 | - | 1215 | WP_013009970.1 | ATP-binding protein | - |
| DACET_RS03185 () | 648665..649006 | - | 342 | WP_013009971.1 | hypothetical protein | - |
| DACET_RS03190 () | 649008..650180 | - | 1173 | WP_013009972.1 | Putative defective protein IntQ ; Integrase | Integrase |
| DACET_RS03195 () | 650190..650426 | - | 237 | WP_013009973.1 | hypothetical protein | - |
| DACET_RS03200 () | 650431..651333 | - | 903 | WP_013009974.1 | hypothetical protein | - |
| DACET_RS03205 () | 651513..653057 | + | 1545 | WP_013009975.1 | IS21 family transposase IS1491 | Transposase |
| DACET_RS03210 () | 653045..653779 | + | 735 | WP_013009976.1 | IS21 family transposase ISGur9 | Transposase |
| DACET_RS15360 () | 654327..654857 | - | 531 | WP_013009977.1 | hypothetical protein | - |
| DACET_RS03225 () | 655288..655659 | - | 372 | WP_013009978.1 | hypothetical protein | - |
| DACET_RS03230 () | 655736..655954 | - | 219 | WP_013009979.1 | hypothetical protein | - |
| DACET_RS03235 () | 656001..656201 | - | 201 | WP_041229841.1 | hypothetical protein | - |
| DACET_RS03245 () | 656282..657375 | + | 1094 | WP_148214139.1 | IS3 family transposase ISDde4 | Transposase |
| DACET_RS03250 () | 657490..657876 | + | 387 | WP_013009981.1 | hypothetical protein | - |
| DACET_RS03255 () | 657884..658192 | - | 309 | WP_013009982.1 | putative addiction module antidote protein | - |
| DACET_RS03260 () | 658179..658499 | - | 321 | WP_013009983.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| DACET_RS03265 () | 658605..659969 | + | 1365 | WP_013009984.1 | ATP-binding protein | - |
| DACET_RS03275 () | 659929..661043 | + | 1115 | Protein_651 | IS3 family transposase ISMch1 | Transposase |
| DACET_RS03280 () | 661141..662079 | - | 939 | Protein_652 | IS256 family transposase ISPeth4 | Transposase |
| DACET_RS03285 () | 662719..665175 | - | 2457 | WP_013009988.1 | S8 family peptidase | - |
| DACET_RS03290 () | 665178..666140 | - | 963 | WP_013009989.1 | ATP-dependent zinc metalloprotease FtsH | VF |
| DACET_RS03295 () | 666319..667437 | - | 1119 | WP_013009990.1 | hypothetical protein | - |
| DACET_RS03300 () | 667503..669629 | - | 2127 | WP_013009991.1 | hypothetical protein | - |
| DACET_RS03305 () | 669626..670096 | - | 471 | WP_013009992.1 | plasmid mobilization relaxosome protein MobC | - |
| DACET_RS03310 () | 670475..670831 | + | 357 | WP_013009993.1 | hypothetical protein | - |
| DACET_RS03320 () | 671163..672371 | + | 1209 | WP_013009995.1 | IS256 family transposase ISAs3 | Transposase |
| DACET_RS03325 () | 672390..672680 | - | 291 | WP_148214140.1 | helix-turn-helix domain-containing protein | - |
| DACET_RS03330 () | 672900..673853 | + | 954 | WP_013009997.1 | ParM/StbA family protein | - |
| DACET_RS03335 () | 673925..674176 | + | 252 | WP_013009998.1 | hypothetical protein | - |
| DACET_RS03340 () | 674216..675430 | - | 1215 | WP_013009968.1 | IS256 family transposase ISDku1 | Transposase |
| DACET_RS03355 () | 676950..677327 | + | 378 | WP_013010001.1 | NERD domain-containing protein | - |
| DACET_RS03360 () | 677420..678820 | + | 1401 | WP_013010002.1 | IS4 family transposase ISDha5 | Transposase |
| DACET_RS03365 () | 679319..680860 | + | 1542 | WP_013009613.1 | IS21 family transposase ISMt2 | Transposase |
| DACET_RS03370 () | 680844..681590 | + | 747 | WP_013009614.1 | IS21 family transposase ISBmu1 | Transposase |
| DACET_RS03375 () | 682158..683585 | + | 1428 | WP_013010003.1 | hypothetical protein | - |
| DACET_RS03380 () | 683639..684055 | + | 417 | WP_148214215.1 | hypothetical protein | - |
| DACET_RS03385 () | 684070..687009 | + | 2940 | WP_013010005.1 | molybdopterin-dependent oxidoreductase | - |
| DACET_RS03390 () | 687030..687776 | + | 747 | WP_013010006.1 | 4Fe-4S dicluster domain-containing protein | - |
| DACET_RS03395 () | 687860..690181 | + | 2322 | WP_169304176.1 | B12-binding domain-containing radical SAM protein | - |
| DACET_RS03400 () | 690168..691922 | + | 1755 | WP_013010008.1 | hypothetical protein | - |
| DACET_RS03405 () | 691960..692661 | + | 702 | WP_013010009.1 | molecular chaperone TorD family protein | - |
| DACET_RS03410 () | 692680..693549 | + | 870 | WP_041229852.1 | hypothetical protein | - |
| DACET_RS03415 () | 693562..694173 | + | 612 | WP_013010010.1 | 4Fe-4S dicluster domain-containing protein | - |
| DACET_RS03420 () | 694225..695451 | + | 1227 | WP_013010011.1 | radical SAM protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|