MGE detailed information
MGE type: Mobilizable plasmid MGE length: 66001 bp
Accession: NC_013942 Location: 1..66001 Organism: Escherichia coli O55:H7 str. CB9615 Replicon: plasmid pO55
Accession: NC_013942 Location: 1..66001 Organism: Escherichia coli O55:H7 str. CB9615 Replicon: plasmid pO55
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| G2583_RS27210 () | 174..452 | + | 279 | WP_072131700.1 | antirestriction protein | - |
| G2583_RS27215 () | 499..921 | + | 423 | WP_000271758.1 | DUF1380 family protein | - |
| G2583_RS27220 () | 918..1109 | + | 192 | WP_001024835.1 | hypothetical protein | - |
| G2583_RS27235 () | 1608..1814 | + | 207 | WP_000275846.1 | hypothetical protein | - |
| G2583_RS27240 () | 1839..2126 | + | 288 | WP_000107542.1 | hypothetical protein | - |
| G2583_RS27245 () | 2245..3066 | + | 822 | WP_001234472.1 | DUF945 domain-containing protein | - |
| G2583_RS27250 () | 3345..4685 | + | 1341 | WP_001130323.1 | IS4 family transposase ISCro3 | Transposase |
| G2583_RS27255 () | 4806..5396 | - | 591 | WP_013009334.1 | hypothetical protein | VF |
| G2583_RS27260 () | 5729..6112 | + | 384 | WP_001151524.1 | relaxosome protein TraM | - |
| G2583_RS31465 () | 6299..6988 | + | 690 | Protein_9 | conjugal transfer transcriptional regulator TraJ | - |
| G2583_RS27270 () | 7087..7482 | + | 396 | WP_013009335.1 | conjugal transfer relaxosome protein TraY | - |
| G2583_RS27275 () | 7515..7879 | + | 365 | Protein_11 | type IV conjugative transfer system pilin TraA | - |
| G2583_RS27280 () | 7894..8205 | + | 312 | WP_000012106.1 | type IV conjugative transfer system protein TraL | - |
| G2583_RS27285 () | 8227..8793 | + | 567 | WP_000399770.1 | type IV conjugative transfer system protein TraE | - |
| G2583_RS27290 () | 8780..9280 | + | 501 | Protein_14 | type-F conjugative transfer system secretin TraK | - |
| G2583_RS27295 () | 9311..10057 | + | 747 | Protein_15 | conjugative transfer relaxase/helicase TraI | - |
| G2583_RS27300 () | 10045..10518 | + | 474 | Protein_16 | DNA helicase | - |
| G2583_RS27305 () | 10538..11284 | + | 747 | WP_000205758.1 | conjugal transfer pilus acetylase TraX | - |
| G2583_RS27310 () | 11339..11899 | + | 561 | WP_000139371.1 | fertility inhibition protein FinO | - |
| G2583_RS27315 () | 12034..12239 | + | 206 | Protein_19 | hypothetical protein | - |
| G2583_RS27320 () | 12485..12879 | + | 395 | Protein_20 | thermonuclease family protein | - |
| G2583_RS31470 () | 13242..13385 | - | 144 | Protein_21 | IS3 family transposase | - |
| G2583_RS27325 () | 13388..13531 | - | 144 | Protein_22 | IS3 family transposase IS911 | Transposase |
| G2583_RS29885 () | 13608..14281 | + | 674 | Protein_23 | DDE-type integrase/transposase/recombinase | - |
| G2583_RS27345 () | 14797..17457 | + | 2661 | WP_000770129.1 | Metalloprotease StcE | VF |
| G2583_RS27350 () | 17541..18416 | + | 876 | WP_001368871.1 | Type II secretion system protein C | VF |
| G2583_RS27355 () | 18417..20387 | + | 1971 | WP_013009342.1 | Type II secretion system protein D | VF |
| G2583_RS27360 () | 20384..21886 | + | 1503 | WP_001418198.1 | Type II secretion system protein E | VF |
| G2583_RS27365 () | 21888..23111 | + | 1224 | WP_001173149.1 | Type II secretion system protein F | VF |
| G2583_RS27370 () | 23142..23576 | + | 435 | WP_001231213.1 | Type II secretion system protein G | VF |
| G2583_RS27375 () | 23573..24124 | + | 552 | WP_000082928.1 | type II secretion system minor pseudopilin GspH | - |
| G2583_RS27380 () | 24139..24486 | + | 348 | WP_001420206.1 | Type II secretion system protein I | VF |
| G2583_RS27385 () | 24483..25082 | + | 600 | WP_000082784.1 | Type II secretion system protein J | VF |
| G2583_RS27390 () | 25079..26056 | + | 978 | WP_000842183.1 | Putative type II secretion system protein K | VF |
| G2583_RS27395 () | 26095..27267 | + | 1173 | WP_071526091.1 | Type II secretion system protein L | VF |
| G2583_RS27400 () | 27254..27769 | + | 516 | WP_000998852.1 | Type II secretion system protein M | VF |
| G2583_RS27405 () | 27821..28654 | + | 834 | WP_000088803.1 | Type 4 prepilin-like proteins leader peptide-processing enzyme | VF |
| G2583_RS27410 () | 28748..29149 | + | 402 | WP_001222321.1 | GspS family T2SS pilot lipoprotein variant EptO | - |
| G2583_RS30720 () | 29224..29439 | + | 216 | Protein_38 | IS3 family transposase IS1203 | Transposase |
| G2583_RS31480 () | 29738..30031 | + | 294 | Protein_39 | hypothetical protein | - |
| G2583_RS27425 () | 30260..30508 | + | 249 | WP_000083841.1 | replication regulatory protein RepA | - |
| G2583_RS31655 () | 30531..30638 | + | 108 | Protein_41 | incFII family plasmid replication initiator RepA | - |
| G2583_RS31660 () | 31340..31498 | + | 159 | WP_000829588.1 | hypothetical protein | - |
| G2583_RS27435 () | 31553..31822 | + | 270 | WP_000079946.1 | hypothetical protein | Antitoxin Detail |
| G2583_RS27440 () | 31819..32100 | + | 282 | WP_000969997.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| G2583_RS27445 () | 32296..32637 | - | 342 | WP_000578011.1 | hypothetical protein | - |
| G2583_RS27450 () | 32937..33524 | + | 588 | WP_001418189.1 | serine acetyltransferase | - |
| G2583_RS27455 () | 33806..34399 | - | 594 | WP_000517696.1 | hypothetical protein | - |
| G2583_RS27460 () | 34753..36099 | + | 1347 | WP_001132032.1 | hypothetical protein | - |
| G2583_RS27465 () | 36378..38258 | + | 1881 | WP_001283342.1 | colicin 1A | - |
| G2583_RS27470 () | 38280..38615 | - | 336 | WP_001080734.1 | colicin 1A immunity protein | - |
| G2583_RS27475 () | 38744..39091 | + | 348 | WP_000142440.1 | hypothetical protein | - |
| G2583_RS27480 () | 39109..39699 | - | 591 | WP_000194567.1 | hypothetical protein | - |
| G2583_RS27485 () | 39819..40460 | - | 642 | WP_000470626.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| G2583_RS27490 () | 40615..43593 | + | 2979 | WP_000124031.1 | Tn3 family transposase TnpA_TnEc1 | Transposase |
| G2583_RS27495 () | 43671..44075 | + | 405 | WP_000839179.1 | IS66 family transposase ISEc22 | Transposase |
| G2583_RS27500 () | 44072..44419 | + | 348 | WP_000612624.1 | IS66 family transposase ISKpn24 | Transposase |
| G2583_RS27505 () | 44468..46006 | + | 1539 | WP_000099186.1 | IS66 family transposase ISEc22 | Transposase |
| G2583_RS29925 () | 46088..46528 | + | 441 | WP_072141484.1 | recombinase family protein | - |
| G2583_RS27510 () | 46509..47216 | + | 708 | Protein_59 | Tn3 family transposase TnpA_ISPa40 | Transposase |
| G2583_RS27515 () | 47302..48045 | + | 744 | Protein_60 | IS21 family transposase IS100kyp | Transposase |
| G2583_RS27520 () | 48182..48846 | + | 665 | Protein_61 | tyrosine-type recombinase/integrase | - |
| G2583_RS27525 () | 49589..50914 | + | 1326 | WP_001025657.1 | hypothetical protein | VF |
| G2583_RS29930 () | 51063..51346 | + | 284 | Protein_63 | YkgJ family cysteine cluster protein | - |
| G2583_RS27545 () | 53217..53654 | - | 438 | WP_000273581.1 | hypothetical protein | - |
| G2583_RS27550 () | 53903..54082 | - | 180 | WP_000526857.1 | hypothetical protein | - |
| G2583_RS27555 () | 54285..54659 | + | 375 | WP_001368887.1 | hypothetical protein | - |
| G2583_RS31490 () | 54970..55131 | - | 162 | Protein_68 | epoxyqueuosine reductase QueH | - |
| G2583_RS27830 () | 55182..55322 | + | 141 | Protein_69 | serine/threonine protein kinase | - |
| G2583_RS27565 () | 55446..56186 | + | 741 | WP_001066926.1 | IS91 family transposase ISMno23 | Transposase |
| G2583_RS27570 () | 56470..57447 | - | 978 | WP_000361616.1 | RepB family plasmid replication initiator protein | - |
| G2583_RS29950 () | 58093..58498 | - | 406 | Protein_72 | DDE-type integrase/transposase/recombinase | - |
| G2583_RS27580 () | 58500..58787 | - | 288 | WP_001270421.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| G2583_RS27585 () | 58784..59035 | - | 252 | WP_001132893.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| G2583_RS27590 () | 59424..60629 | + | 1206 | WP_000817637.1 | Plasmid partition protein A | VF |
| G2583_RS27595 () | 60626..61588 | + | 963 | WP_000756329.1 | ParB/RepB/Spo0J family partition protein | - |
| G2583_RS27600 () | 61729..62740 | - | 1012 | Protein_77 | DUF4113 domain-containing protein | - |
| G2583_RS27605 () | 62771..63187 | + | 417 | Protein_78 | DUF1281 domain-containing protein | - |
| G2583_RS30745 () | 63191..63496 | + | 306 | WP_032325408.1 | hypothetical protein | - |
| G2583_RS27615 () | 63573..64256 | + | 684 | WP_000085942.1 | DNA methylase | - |
| G2583_RS27620 () | 64257..64478 | + | 222 | WP_001104880.1 | hypothetical protein | - |
| G2583_RS27625 () | 64490..64924 | + | 435 | WP_000274489.1 | DUF1380 family protein | - |
| G2583_RS31665 () | 64970..65746 | + | 777 | Protein_83 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|