MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 39929 bp
Accession: NC_013862 Location: 1..39929 Organism: Allochromatium vinosum DSM 180 Replicon: plasmid pALVIN02
Accession: NC_013862 Location: 1..39929 Organism: Allochromatium vinosum DSM 180 Replicon: plasmid pALVIN02
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ALVIN_RS17355 () | 79..714 | + | 636 | WP_012979570.1 | AAA family ATPase | - |
| ALVIN_RS16170 () | 941..1165 | + | 225 | WP_012979572.1 | WGR domain-containing protein | - |
| ALVIN_RS16175 () | 1315..1530 | + | 216 | WP_012979573.1 | DUF2281 domain-containing protein | - |
| ALVIN_RS17365 () | 1520..1936 | + | 417 | WP_012979574.1 | PIN domain-containing protein | - |
| ALVIN_RS16180 () | 2050..3792 | + | 1743 | WP_012979575.1 | type I restriction-modification system subunit M | - |
| ALVIN_RS16185 () | 3808..4032 | + | 225 | WP_012979576.1 | hypothetical protein | - |
| ALVIN_RS16190 () | 4020..4445 | + | 426 | WP_012979577.1 | type II toxin-antitoxin system VapC family toxin | - |
| ALVIN_RS16195 () | 4442..5803 | + | 1362 | WP_012979578.1 | restriction endonuclease subunit S | - |
| ALVIN_RS16200 () | 5814..6041 | + | 228 | WP_012979579.1 | hypothetical protein | - |
| ALVIN_RS16205 () | 6038..6268 | + | 231 | WP_012979580.1 | virulence factor | Antitoxin Detail |
| ALVIN_RS16210 () | 6274..6675 | + | 402 | WP_043796539.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| ALVIN_RS16215 () | 6672..9803 | + | 3132 | WP_012979582.1 | type I restriction endonuclease subunit R | - |
| ALVIN_RS17370 () | 10096..10518 | + | 423 | WP_081442771.1 | H-NS histone family protein | - |
| ALVIN_RS16220 () | 10615..10902 | - | 288 | WP_012979583.1 | integration host factor subunit beta | - |
| ALVIN_RS16225 () | 11099..11632 | - | 534 | WP_012979584.1 | hypothetical protein | - |
| ALVIN_RS17375 () | 11689..12219 | - | 531 | WP_012979585.1 | hypothetical protein | - |
| ALVIN_RS16235 () | 12296..13456 | - | 1161 | WP_148217653.1 | hypothetical protein | - |
| ALVIN_RS16240 () | 13909..15072 | - | 1164 | WP_012979587.1 | inovirus-type Gp2 protein | - |
| ALVIN_RS16790 () | 15194..16318 | - | 1125 | WP_012979588.1 | inovirus Gp2 family protein | - |
| ALVIN_RS16255 () | 17350..17718 | + | 369 | WP_012979589.1 | hypothetical protein | - |
| ALVIN_RS16260 () | 17761..18018 | + | 258 | WP_012979590.1 | hypothetical protein | - |
| ALVIN_RS16265 () | 18071..18970 | + | 900 | WP_012979591.1 | recombinase RecT | - |
| ALVIN_RS16270 () | 19075..20079 | + | 1005 | WP_012979592.1 | YqaJ viral recombinase family protein | - |
| ALVIN_RS16275 () | 20176..21126 | + | 951 | WP_012979593.1 | AAA family ATPase | - |
| ALVIN_RS16280 () | 21123..21446 | + | 324 | WP_012979594.1 | hypothetical protein | - |
| ALVIN_RS16285 () | 21528..22358 | + | 831 | Protein_25 | DUF3150 domain-containing protein | - |
| ALVIN_RS16290 () | 22591..24399 | + | 1809 | WP_012979596.1 | VWA domain-containing protein | - |
| ALVIN_RS16295 () | 24475..24978 | + | 504 | WP_012979597.1 | DNA repair protein RadC | - |
| ALVIN_RS17730 () | 25233..25568 | + | 336 | WP_148217654.1 | hypothetical protein | - |
| ALVIN_RS17380 () | 25572..25958 | - | 387 | WP_043796534.1 | hypothetical protein | - |
| ALVIN_RS16795 () | 26046..26651 | - | 606 | WP_012979599.1 | DUF1311 domain-containing protein | - |
| ALVIN_RS16320 () | 26900..27535 | - | 636 | WP_043796536.1 | hypothetical protein | - |
| ALVIN_RS16325 () | 27991..29613 | - | 1623 | WP_012979603.1 | hypothetical protein | - |
| ALVIN_RS16330 () | 29681..30781 | - | 1101 | WP_012979604.1 | hypothetical protein | - |
| ALVIN_RS16335 () | 31363..31656 | - | 294 | WP_012979605.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| ALVIN_RS16340 () | 31644..31931 | - | 288 | WP_012979606.1 | hypothetical protein | Antitoxin Detail |
| ALVIN_RS16350 () | 32467..32682 | - | 216 | WP_043796537.1 | hypothetical protein | - |
| ALVIN_RS16355 () | 32642..33361 | - | 720 | WP_012979608.1 | Tn3 family transposase TnpR_ISThsp9 | Transposase |
| ALVIN_RS16360 () | 33582..34283 | + | 702 | WP_012979609.1 | DNA-binding protein | - |
| ALVIN_RS17395 () | 34425..34778 | + | 354 | WP_012979610.1 | hypothetical protein | - |
| ALVIN_RS16365 () | 34804..35211 | + | 408 | WP_012979611.1 | hypothetical protein | - |
| ALVIN_RS17400 () | 35292..35861 | - | 570 | WP_148217656.1 | hypothetical protein | - |
| ALVIN_RS17405 () | 35927..36409 | - | 483 | WP_012979613.1 | hypothetical protein | - |
| ALVIN_RS17415 () | 36888..37481 | - | 594 | WP_012979615.1 | lipase, class 2 | - |
| ALVIN_RS16370 () | 39053..39898 | + | 846 | WP_012979617.1 | replication initiation protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|