MGE detailed information
MGE type: Genomic_island MGE length: 9352 bp
Accession: NC_013008 Location: 5238295..5247646 Organism: Escherichia coli O157:H7 str. TW14359 Replicon: chromosome
Accession: NC_013008 Location: 5238295..5247646 Organism: Escherichia coli O157:H7 str. TW14359 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECSP_RS27140 () | 5235026..5235745 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| ECSP_RS27145 () | 5235742..5237373 | - | 1632 | WP_001216477.1 | sensor histidine kinase | - |
| ECSP_RS27150 () | 5237554..5237784 | + | 231 | WP_000371704.1 | (4Fe-4S)-binding protein | - |
| ECSP_RS27155 () | 5237796..5238068 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| ECSP_RS27165 () | 5238295..5238591 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| ECSP_RS27170 () | 5238619..5238792 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| ECSP_RS27175 () | 5238911..5240428 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| ECSP_RS27180 () | 5240665..5242122 | - | 1458 | WP_000856824.1 | dipeptide/tripeptide permease DtpC | - |
| ECSP_RS27185 () | 5242181..5244328 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| ECSP_RS27190 () | 5244408..5245742 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| ECSP_RS27195 () | 5246108..5247646 | - | 1539 | WP_001187177.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| ECSP_RS27210 () | 5248445..5249020 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| ECSP_RS27215 () | 5249057..5250754 | - | 1698 | WP_000068986.1 | protein-disulfide reductase DsbD | - |
| ECSP_RS27220 () | 5250730..5251068 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| ECSP_RS27225 () | 5251184..5252485 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.006 |