MGE detailed information
MGE type: Prophage MGE length: 12066 bp
Accession: NC_012971 Location: 1397168..1409233 Organism: Escherichia coli BL21(DE3) Replicon: chromosome
Accession: NC_012971 Location: 1397168..1409233 Organism: Escherichia coli BL21(DE3) Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECD_RS07060 () | 1393218..1394201 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| ECD_RS07070 () | 1394679..1396052 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| ECD_RS07075 () | 1396181..1397116 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| ECD_RS23305 () | 1397168..1398403 | - | 1236 | WP_000040858.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| ECD_RS07085 () | 1398405..1398620 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| ECD_RS07090 () | 1398699..1398908 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 1398724..1398902 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1398724..1398902 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1398724..1398902 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1398724..1398902 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| ECD_RS07095 () | 1398901..1399095 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| ECD_RS07100 () | 1399152..1399961 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| ECD_RS07105 () | 1399954..1401053 | - | 1100 | Protein_1349 | PD-(D/E)XK nuclease-like domain-containing protein | - |
| ECD_RS07110 () | 1401155..1401430 | - | 276 | WP_000632297.1 | protein RacC | - |
| ECD_RS07115 () | 1401505..1401675 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| ECD_RS07120 () | 1401675..1401896 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| ECD_RS07125 () | 1402338..1402826 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| ECD_RS22665 () | 1402823..1402978 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| ECD_RS07130 () | 1403122..1403334 | + | 213 | WP_012775985.1 | phage lysis protein EssD | - |
| ECD_RS07135 () | 1403339..1403683 | + | 345 | WP_000193293.1 | YdfR family protein | - |
| ECD_RS07140 () | 1403649..1403921 | - | 273 | WP_000370546.1 | hypothetical protein | - |
| ECD_RS07145 () | 1404027..1404560 | + | 534 | WP_000992105.1 | lysozyme | - |
| ECD_RS24685 () | 1404777..1404962 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| ECD_RS07155 () | 1405159..1406616 | + | 1458 | WP_001097897.1 | Trk system potassium transporter TrkG | - |
| ECD_RS07160 () | 1406754..1407149 | + | 396 | WP_012775984.1 | ParB/Srx family N-terminal domain-containing protein | - |
| ECD_RS24690 () | 1407121..1407834 | + | 714 | Protein_1362 | hypothetical protein | - |
| ECD_RS07170 () | 1407831..1408109 | + | 279 | WP_000654171.1 | hypothetical protein | - |
| ECD_RS07175 () | 1408122..1408415 | + | 294 | WP_000355360.1 | hypothetical protein | - |
| ECD_RS07180 () | 1408435..1408545 | + | 111 | Protein_1365 | tail fiber assembly protein | - |
| ECD_RS07185 () | 1408643..1409233 | - | 591 | WP_000078178.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| ECD_RS07190 () | 1409550..1409783 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| ECD_RS25630 () | 1409852..1409965 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| ECD_RS25900 () | 1410305..1410478 | + | 174 | WP_001157925.1 | hypothetical protein | - |
| ECD_RS07195 () | 1410744..1411178 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| ECD_RS07200 () | 1411319..1412452 | - | 1134 | WP_000837924.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli strain BL21 (TaKaRa) | Prophage | TA52902 | NZ_CP010816 | 1366333..1378398 | 0 |