MGE detailed information
MGE type: Prophage MGE length: 16111 bp
Accession: NC_012967 Location: 1409170..1425280 Organism: Escherichia coli B str. REL606 Replicon: chromosome
Accession: NC_012967 Location: 1409170..1425280 Organism: Escherichia coli B str. REL606 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECB_RS07020 () | 1405220..1406203 | + | 984 | WP_000387388.1 | zinc transporter ZntB | - |
| ECB_RS07030 () | 1406681..1408054 | + | 1374 | WP_000123737.1 | ATP-dependent RNA helicase DbpA | - |
| ECB_RS07035 () | 1408183..1409118 | - | 936 | WP_001157407.1 | tRNA 2-thiocytidine(32) synthetase TtcA | - |
| ECB_RS23520 () | 1409170..1410405 | - | 1236 | WP_000040858.1 | Putative defective protein IntQ ; Integrase | Integrase |
| ECB_RS07045 () | 1410407..1410622 | - | 216 | WP_000079604.1 | excisionase XisR | - |
| ECB_RS07050 () | 1410701..1410910 | - | 210 | WP_000276809.1 | double-strand break reduction protein RcbA | - |
| - () | 1410726..1410904 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1410726..1410904 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1410726..1410904 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| - () | 1410726..1410904 | + | 179 | NuclAT_0 | - | Antitoxin Detail |
| ECB_RS07055 () | 1410903..1411097 | - | 195 | WP_001317028.1 | type I toxin-antitoxin system endodeoxyribonuclease toxin RalR | Toxin Detail |
| ECB_RS07060 () | 1411154..1411963 | - | 810 | WP_000166319.1 | recombination protein RecT | - |
| ECB_RS07065 () | 1411956..1414556 | - | 2601 | WP_000105139.1 | exodeoxyribonuclease VIII | - |
| ECB_RS07070 () | 1414658..1414933 | - | 276 | WP_000632297.1 | protein RacC | - |
| ECB_RS07075 () | 1415008..1415178 | - | 171 | WP_001352098.1 | conserved protein, Rac prophage | - |
| ECB_RS07080 () | 1415178..1415399 | - | 222 | WP_000560223.1 | killing protein KilR | - |
| ECB_RS07085 () | 1415841..1416329 | + | 489 | WP_001312793.1 | superinfection exclusion protein B | - |
| ECB_RS22885 () | 1416326..1416481 | - | 156 | WP_001169151.1 | YdaF family protein | - |
| ECB_RS07090 () | 1416625..1416837 | + | 213 | WP_012775985.1 | phage lysis protein EssD | - |
| ECB_RS07095 () | 1416842..1417186 | + | 345 | WP_000193293.1 | YdfR family protein | - |
| ECB_RS07100 () | 1417152..1417424 | - | 273 | WP_000370546.1 | hypothetical protein | - |
| ECB_RS07105 () | 1417530..1418063 | + | 534 | WP_000992105.1 | lysozyme | - |
| ECB_RS24955 () | 1418280..1418465 | + | 186 | WP_001228696.1 | prophage lysis lipoprotein RzoD | - |
| ECB_RS07115 () | 1418662..1420119 | + | 1458 | WP_001097897.1 | Trk system potassium transporter TrkG | - |
| ECB_RS07120 () | 1420257..1420688 | + | 432 | WP_001291101.1 | ParB/Srx family N-terminal domain-containing protein | - |
| ECB_RS07125 () | 1420793..1421557 | + | 765 | WP_000770037.1 | hypothetical protein | - |
| ECB_RS07130 () | 1421857..1423881 | + | 2025 | WP_024182056.1 | prophage tail fiber N-terminal domain-containing protein | - |
| ECB_RS07135 () | 1423878..1424156 | + | 279 | WP_000654171.1 | hypothetical protein | - |
| ECB_RS07140 () | 1424169..1424462 | + | 294 | WP_000355360.1 | hypothetical protein | - |
| ECB_RS07145 () | 1424482..1424592 | + | 111 | Protein_1363 | tail fiber assembly protein | - |
| ECB_RS07150 () | 1424690..1425280 | - | 591 | WP_000078178.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| ECB_RS07155 () | 1425597..1425830 | - | 234 | WP_000836768.1 | cold shock protein YdfK | - |
| ECB_RS25425 () | 1425899..1426012 | - | 114 | WP_120795384.1 | hypothetical protein | - |
| ECB_RS25730 () | 1426352..1426525 | + | 174 | WP_001157925.1 | hypothetical protein | - |
| ECB_RS07160 () | 1426791..1427225 | - | 435 | WP_001300461.1 | universal stress protein UspF | - |
| ECB_RS07165 () | 1427366..1428499 | - | 1134 | WP_000837924.1 | porin OmpN | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli strain BL21 (TaKaRa) | Prophage | TA52902 | NZ_CP010816 | 1366333..1378398 | 0.007 |