MGE detailed information
MGE type: Prophage MGE length: 39093 bp
Accession: NC_012947 Location: 3518837..3557929 Organism: Escherichia coli BL21-Gold(DE3)pLysS AG Replicon: chromosome
Accession: NC_012947 Location: 3518837..3557929 Organism: Escherichia coli BL21-Gold(DE3)pLysS AG Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECBD_RS17595 () | 3514478..3514816 | + | 339 | Protein_3359 | LysR family transcriptional regulator | - |
| ECBD_RS17605 () | 3515133..3516386 | - | 1254 | WP_000893272.1 | glutamate-5-semialdehyde dehydrogenase | - |
| ECBD_RS17610 () | 3516398..3517501 | - | 1104 | WP_001285288.1 | glutamate 5-kinase | - |
| ECBD_RS17615 () | 3517789..3518826 | + | 1038 | WP_000749880.1 | phosphoporin PhoE | - |
| ECBD_RS17620 () | 3518837..3519534 | - | 698 | Protein_3363 | IS1 family transposase IS1R | Transposase |
| ECBD_RS17625 () | 3519660..3520061 | - | 402 | WP_000174677.1 | sigma factor-binding protein Crl | - |
| ECBD_RS17630 () | 3520119..3521363 | - | 1245 | WP_000189541.1 | esterase FrsA | - |
| - () | 3520779..3520859 | - | 81 | NuclAT_13 | - | - |
| - () | 3520779..3520859 | - | 81 | NuclAT_13 | - | - |
| - () | 3520779..3520859 | - | 81 | NuclAT_13 | - | - |
| - () | 3520779..3520859 | - | 81 | NuclAT_13 | - | - |
| ECBD_RS17635 () | 3521455..3521913 | - | 459 | WP_001291990.1 | xanthine phosphoribosyltransferase | - |
| ECBD_RS17640 () | 3522174..3523631 | + | 1458 | WP_001293003.1 | cytosol nonspecific dipeptidase | - |
| ECBD_RS17645 () | 3523688..3524209 | - | 522 | Protein_3368 | peptide chain release factor H | - |
| ECBD_RS17650 () | 3524208..3524411 | - | 204 | Protein_3369 | RNA ligase RtcB family protein | - |
| ECBD_RS17655 () | 3524657..3525109 | - | 453 | WP_001059847.1 | GNAT family N-acetyltransferase | - |
| ECBD_RS17660 () | 3525119..3525517 | - | 399 | WP_001263493.1 | type II toxin-antitoxin system mRNA interferase toxin YafO | Toxin Detail |
| ECBD_RS17665 () | 3525520..3525813 | - | 294 | WP_000554757.1 | type I toxin-antitoxin system antitoxin YafN | Antitoxin Detail |
| ECBD_RS17670 () | 3525865..3526920 | - | 1056 | WP_001226164.1 | DNA polymerase IV | - |
| ECBD_RS17675 () | 3526991..3527776 | - | 786 | WP_000207564.1 | hypothetical protein | VF |
| ECBD_RS17680 () | 3527748..3529460 | + | 1713 | Protein_3375 | hypothetical protein | VF |
| ECBD_RS17685 () | 3529676..3530173 | - | 498 | WP_000006260.1 | REP-associated tyrosine transposase RayT | - |
| ECBD_RS17690 () | 3530349..3531122 | - | 774 | WP_001353765.1 | hypothetical protein | VF |
| ECBD_RS17695 () | 3531308..3531568 | + | 261 | WP_000729704.1 | type II toxin-antitoxin system antitoxin DinJ | Antitoxin Detail |
| ECBD_RS17700 () | 3531571..3531849 | + | 279 | WP_000615981.1 | type II toxin-antitoxin system mRNA interferase toxin YafQ | Toxin Detail |
| ECBD_RS17705 () | 3532005..3532745 | + | 741 | WP_001225679.1 | murein L,D-transpeptidase | - |
| ECBD_RS17710 () | 3532716..3533483 | - | 768 | WP_000333379.1 | class II glutamine amidotransferase | - |
| ECBD_RS17715 () | 3533689..3534267 | - | 579 | WP_000284050.1 | hypothetical protein | VF |
| ECBD_RS17720 () | 3534507..3536951 | + | 2445 | WP_000973107.1 | hypothetical protein | VF |
| ECBD_RS17725 () | 3536994..3537440 | - | 447 | WP_001308392.1 | Ivy family C-type lysozyme inhibitor | - |
| ECBD_RS17730 () | 3537621..3538391 | + | 771 | WP_001118052.1 | 2-oxoglutaramate amidase | - |
| ECBD_RS17735 () | 3538432..3539568 | - | 1137 | WP_000420821.1 | ISAs1 family transposase ISEc1 | Transposase |
| ECBD_RS25715 () | 3539999..3540370 | - | 372 | WP_012777340.1 | hypothetical protein | - |
| ECBD_RS17740 () | 3540372..3541069 | - | 698 | Protein_3388 | IS1 family transposase IS1A | Transposase |
| ECBD_RS17745 () | 3541335..3542120 | - | 786 | WP_001053631.1 | hypothetical protein | - |
| ECBD_RS17755 () | 3542659..3543390 | - | 732 | WP_001300756.1 | DNA polymerase III subunit epsilon | - |
| ECBD_RS17760 () | 3543455..3543922 | + | 468 | WP_000917883.1 | ribonuclease HI | - |
| ECBD_RS17765 () | 3543919..3544641 | - | 723 | WP_001297210.1 | class I SAM-dependent methyltransferase | - |
| ECBD_RS17770 () | 3544675..3545430 | + | 756 | WP_001052717.1 | hydroxyacylglutathione hydrolase | - |
| ECBD_RS17775 () | 3545502..3546860 | + | 1359 | WP_000644685.1 | hypothetical protein | VF |
| ECBD_RS17780 () | 3546908..3547504 | - | 597 | Protein_3395 | methyltransferase domain-containing protein | - |
| ECBD_RS17785 () | 3547535..3548335 | - | 801 | WP_001230983.1 | endonuclease/exonuclease/phosphatase family protein | - |
| ECBD_RS17790 () | 3548576..3549490 | + | 915 | WP_000648577.1 | hypothetical protein | VF |
| ECBD_RS17795 () | 3549487..3550290 | - | 804 | WP_000997050.1 | 2,5-didehydrogluconate reductase DkgB | - |
| ECBD_RS17830 () | 3556138..3556710 | - | 573 | WP_001140174.1 | hypothetical protein | VF |
| ECBD_RS17835 () | 3556898..3557929 | + | 1032 | WP_000593994.1 | hypothetical protein | VF |
| ECBD_RS17840 () | 3557922..3558575 | + | 654 | WP_001294600.1 | methionine ABC transporter permease MetI | - |
| ECBD_RS17845 () | 3558615..3559430 | + | 816 | WP_000874224.1 | methionine ABC transporter substrate-binding lipoprotein MetQ | - |
| ECBD_RS17850 () | 3559548..3559952 | + | 405 | WP_001202329.1 | Rcs stress response system protein RcsF | - |
| ECBD_RS17855 () | 3559949..3560656 | + | 708 | WP_000094031.1 | tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO | - |
| ECBD_RS17860 () | 3560767..3562485 | + | 1719 | WP_001260712.1 | proline--tRNA ligase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|