MGE detailed information
MGE type: Genomic_island MGE length: 31164 bp
Accession: NC_012467 Location: 948920..980083 Organism: Streptococcus pneumoniae P1031 Replicon: chromosome
Accession: NC_012467 Location: 948920..980083 Organism: Streptococcus pneumoniae P1031 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SPP_RS05105 () | 944815..945429 | + | 615 | WP_000476375.1 | cell wall hydrolase Pmp23 | - |
| SPP_RS05110 () | 945503..946477 | + | 975 | WP_001227756.1 | DUF1002 domain-containing protein | - |
| SPP_RS05115 () | 946551..948182 | + | 1632 | WP_000914575.1 | 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD | - |
| SPP_RS05120 () | 948396..948674 | + | 279 | WP_000710807.1 | hypothetical protein | - |
| SPP_RS05125 () | 948920..949138 | + | 219 | WP_001207345.1 | helix-turn-helix transcriptional regulator | - |
| SPP_RS05130 () | 949531..950556 | + | 1026 | WP_000790743.1 | iron-siderophore ABC transporter substrate-binding protein | - |
| SPP_RS05135 () | 950546..951553 | + | 1008 | WP_001244693.1 | Ferric enterobactin transport system permease protein FepD | VF |
| SPP_RS05140 () | 951553..952560 | + | 1008 | WP_001180357.1 | putative siderophore transport system permease protein YfhA | VF |
| SPP_RS05145 () | 952560..953354 | + | 795 | WP_000677520.1 | putative siderophore transport system ATP-binding protein YusV | VF |
| SPP_RS11930 () | 953742..954131 | + | 390 | WP_074017679.1 | restriction endonuclease subunit S | - |
| SPP_RS13105 () | 954097..954411 | + | 315 | WP_161801538.1 | hypothetical protein | - |
| SPP_RS05160 () | 955095..955256 | + | 162 | WP_000368174.1 | hypothetical protein | - |
| SPP_RS13110 () | 955348..956196 | + | 849 | WP_000031841.1 | Tn3 family transposase TnpR_ISAcsp1 | Transposase |
| SPP_RS13115 () | 956242..957027 | + | 786 | WP_168960816.1 | recombinase zinc beta ribbon domain-containing protein | - |
| SPP_RS05175 () | 957295..957861 | + | 567 | WP_000234983.1 | hypothetical protein | - |
| SPP_RS05180 () | 958184..958372 | + | 189 | WP_000179769.1 | hypothetical protein | - |
| SPP_RS05185 () | 958434..959192 | + | 759 | WP_000262024.1 | ATP-grasp domain-containing protein | - |
| SPP_RS05190 () | 959250..960104 | + | 855 | WP_000900020.1 | ADP-ribosylglycohydrolase family protein | - |
| SPP_RS05195 () | 960216..961100 | + | 885 | WP_000710109.1 | diacylglycerol kinase family lipid kinase | - |
| SPP_RS05200 () | 961263..963000 | + | 1738 | Protein_983 | alpha-glycosidase | - |
| SPP_RS05210 () | 963275..963730 | + | 456 | WP_000500471.1 | hypothetical protein | - |
| SPP_RS05215 () | 964173..964649 | + | 477 | WP_000579613.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| SPP_RS05220 () | 964649..965410 | + | 762 | WP_000405353.1 | zeta toxin family protein | Toxin Detail |
| SPP_RS05225 () | 965438..966595 | + | 1158 | WP_001213953.1 | hypothetical protein | - |
| SPP_RS05230 () | 967414..967773 | + | 360 | WP_000003746.1 | hypothetical protein | - |
| SPP_RS05235 () | 967849..968147 | + | 299 | Protein_989 | MobC family plasmid mobilization relaxosome protein | - |
| SPP_RS13120 () | 968134..969998 | + | 1865 | Protein_990 | relaxase/mobilization nuclease domain-containing protein | - |
| SPP_RS12685 () | 970043..970895 | - | 853 | Protein_991 | Rgg/GadR/MutR family transcriptional regulator | - |
| SPP_RS12690 () | 970977..971048 | + | 72 | WP_001810617.1 | SHP2/SHP3 family peptide pheromone | - |
| SPP_RS05255 () | 971152..972021 | + | 870 | WP_000680920.1 | NAD(P)-dependent oxidoreductase | - |
| SPP_RS05260 () | 972008..972730 | + | 723 | WP_000634194.1 | nucleotidyltransferase | - |
| SPP_RS05265 () | 972727..973257 | + | 531 | WP_000586362.1 | hypothetical protein | - |
| SPP_RS05270 () | 973261..974355 | + | 1095 | WP_000490587.1 | hypothetical protein | - |
| SPP_RS05275 () | 974358..975029 | + | 672 | WP_000620361.1 | hypothetical protein | - |
| SPP_RS05280 () | 975031..976059 | + | 1029 | WP_000838665.1 | UDP-glucose 4-epimerase | VF |
| SPP_RS05285 () | 976083..977327 | + | 1245 | WP_000548397.1 | hypothetical protein | - |
| SPP_RS05290 () | 977377..977736 | + | 360 | WP_001840315.1 | MFS transporter | - |
| SPP_RS05295 () | 977788..978540 | + | 753 | WP_000560322.1 | MFS transporter | - |
| SPP_RS05300 () | 979220..979441 | + | 222 | WP_000286245.1 | helix-turn-helix domain-containing protein | - |
| SPP_RS11965 () | 979889..980191 | + | 303 | Protein_1003 | IS5 family transposase IS1381A | Transposase |
| SPP_RS05310 () | 980347..981576 | + | 1230 | WP_000703361.1 | FtsW/RodA/SpoVE family cell cycle protein | - |
| SPP_RS05315 () | 981596..984292 | + | 2697 | WP_000058196.1 | phosphoenolpyruvate carboxylase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Streptococcus pneumoniae gamPNI0373 | Genomic island | TA6080 | NC_018630 | 1035089..1069396 | 0.005 |