MGE detailed information
MGE type: Genomic_island MGE length: 23635 bp
Accession: NC_011761 Location: 1368452..1392086 Organism: Acidithiobacillus ferrooxidans ATCC 23270 Replicon: chromosome
Accession: NC_011761 Location: 1368452..1392086 Organism: Acidithiobacillus ferrooxidans ATCC 23270 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AFE_RS07350 () | 1364520..1365008 | - | 489 | WP_041645816.1 | hypothetical protein | - |
| AFE_RS16070 () | 1364998..1365981 | - | 984 | WP_012607105.1 | hypothetical protein | - |
| AFE_RS07360 () | 1366160..1368442 | - | 2283 | WP_012607106.1 | DEAD/DEAH box helicase family protein | - |
| AFE_RS07365 () | 1368452..1369651 | - | 1200 | WP_012607107.1 | restriction endonuclease subunit S | - |
| AFE_RS07370 () | 1369648..1371102 | - | 1455 | WP_012607108.1 | type I restriction-modification system subunit M | - |
| AFE_RS07375 () | 1371201..1371575 | - | 375 | WP_009565773.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| AFE_RS15630 () | 1371572..1371769 | - | 198 | WP_012607109.1 | type II toxin-antitoxin system VapB family antitoxin | Antitoxin Detail |
| AFE_RS16460 () | 1372085..1372246 | - | 162 | WP_012536621.1 | hypothetical protein | - |
| AFE_RS07380 () | 1372599..1373273 | + | 675 | WP_012607112.1 | hypothetical protein | - |
| AFE_RS07385 () | 1373270..1373593 | + | 324 | WP_012607113.1 | integration host factor subunit alpha | - |
| AFE_RS07390 () | 1373660..1373935 | + | 276 | WP_012536624.1 | HU family DNA-binding protein | - |
| AFE_RS07395 () | 1373947..1374300 | + | 354 | WP_009560827.1 | hypothetical protein | - |
| AFE_RS15635 () | 1374309..1374530 | + | 222 | WP_009560828.1 | HU family DNA-binding protein | - |
| AFE_RS07400 () | 1375133..1375267 | - | 135 | Protein_1426 | type II toxin-antitoxin system mRNA interferase toxin, RelE/StbE family | - |
| AFE_RS07405 () | 1375254..1375523 | - | 270 | WP_012536625.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| AFE_RS07410 () | 1375548..1376444 | - | 897 | WP_009560830.1 | hypothetical protein | - |
| AFE_RS07415 () | 1376706..1377131 | + | 426 | Protein_1429 | 1-acyl-sn-glycerol-3-phosphate acyltransferase | - |
| AFE_RS07420 () | 1377561..1378040 | + | 480 | WP_009560832.1 | hypothetical protein | - |
| AFE_RS07425 () | 1378283..1378696 | - | 414 | Protein_1431 | IS21 family transposase ISCARN3 | Transposase |
| AFE_RS07430 () | 1378759..1379400 | - | 642 | WP_041645821.1 | hypothetical protein | - |
| AFE_RS07435 () | 1379570..1380268 | + | 699 | WP_146778652.1 | hypothetical protein | - |
| AFE_RS07440 () | 1380702..1381052 | + | 351 | WP_041645825.1 | hypothetical protein | - |
| AFE_RS16590 () | 1381555..1381869 | - | 315 | WP_009562150.1 | IS21 family transposase ISMdi27 | Transposase |
| AFE_RS07450 () | 1382087..1383223 | - | 1137 | WP_009562152.1 | ABC transporter permease | - |
| AFE_RS07455 () | 1383227..1384360 | - | 1134 | WP_012607125.1 | ABC transporter permease | - |
| AFE_RS07460 () | 1384357..1385310 | - | 954 | WP_041645828.1 | putative multidrug ABC transporter ATP-binding protein YbhF | VF |
| AFE_RS07465 () | 1385300..1386250 | - | 951 | WP_009561830.1 | putative multidrug ABC transporter ATP-binding protein YbhF | VF |
| AFE_RS07470 () | 1386247..1387242 | - | 996 | WP_012607128.1 | efflux RND transporter periplasmic adaptor subunit | - |
| AFE_RS07475 () | 1387850..1389091 | - | 1242 | Protein_1441 | IS3 family transposase ISAfe7 | Transposase |
| AFE_RS16595 () | 1389601..1390200 | - | 600 | Protein_1442 | transposase | - |
| AFE_RS07490 () | 1390753..1391325 | - | 573 | WP_009566509.1 | PIN domain-containing protein | Toxin Detail |
| AFE_RS07495 () | 1391326..1391790 | - | 465 | WP_009566508.1 | helix-turn-helix domain-containing protein | Antitoxin Detail |
| AFE_RS15640 () | 1391808..1392086 | - | 279 | WP_009566507.1 | TIR domain-containing protein | - |
| AFE_RS07500 () | 1392226..1396575 | + | 4350 | WP_012607132.1 | DUF3560 domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|