MGE detailed information
MGE type: Genomic_island MGE length: 9351 bp
Accession: NC_011415 Location: 4623362..4632712 Organism: Escherichia coli SE11 Replicon: chromosome
Accession: NC_011415 Location: 4623362..4632712 Organism: Escherichia coli SE11 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECSE_RS23005 () | 4620093..4620812 | - | 720 | WP_000611288.1 | two-component system response regulator DcuR | - |
| ECSE_RS23010 () | 4620809..4622440 | - | 1632 | WP_001216460.1 | sensor histidine kinase | - |
| ECSE_RS23015 () | 4622621..4622851 | + | 231 | WP_000371700.1 | (4Fe-4S)-binding protein | - |
| ECSE_RS23020 () | 4622863..4623135 | + | 273 | WP_000405647.1 | N-acetyltransferase | - |
| ECSE_RS23025 () | 4623362..4623658 | + | 297 | WP_000398619.1 | type V toxin-antitoxin system endoribonuclease antitoxin GhoS | Antitoxin Detail |
| ECSE_RS23030 () | 4623686..4623859 | + | 174 | WP_001173343.1 | type V toxin-antitoxin system toxin GhoT | Toxin Detail |
| ECSE_RS23035 () | 4623978..4625495 | - | 1518 | WP_001295074.1 | lysine--tRNA ligase | - |
| ECSE_RS23040 () | 4625732..4627189 | - | 1458 | WP_000856834.1 | dipeptide/tripeptide permease DtpC | - |
| ECSE_RS23045 () | 4627248..4629395 | - | 2148 | WP_001295383.1 | lysine decarboxylase CadA | - |
| ECSE_RS23050 () | 4629475..4630809 | - | 1335 | WP_000092909.1 | cadaverine/lysine antiporter | - |
| ECSE_RS23055 () | 4631174..4632712 | - | 1539 | WP_001187183.1 | lysine decarboxylation/transport transcriptional activator CadC | - |
| ECSE_RS23070 () | 4633511..4634086 | - | 576 | WP_001188520.1 | transcriptional regulator | - |
| ECSE_RS23075 () | 4634123..4635820 | - | 1698 | WP_000068907.1 | protein-disulfide reductase DsbD | - |
| ECSE_RS23080 () | 4635796..4636134 | - | 339 | WP_000883400.1 | divalent cation tolerance protein CutA | - |
| ECSE_RS23085 () | 4636250..4637551 | - | 1302 | WP_000961959.1 | anaerobic C4-dicarboxylate transporter DcuA | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Escherichia coli str. K-12 substr. MC4100 | Genomic island | TA20087 | HG738867 | 4238430..4247780 | 0.006 | |
| Escherichia coli str. K-12 substr. W3110 | Genomic island | TA21458 | NC_007779 | 4357262..4366612 | 0.006 | |
| Escherichia coli BW2952 | Genomic island | TA23874 | NC_012759 | 4289342..4298692 | 0.006 | |
| Escherichia coli str. K-12 substr. MC4100 strain K-12 | Genomic island | TA285032 | NZ_HG738867 | 4238430..4247780 | 0.006 |