MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 116985 bp
Accession: NC_011365 Location: 1818917..1935901 Organism: Gluconacetobacter diazotrophicus PAl 5 Replicon: chromosome
Accession: NC_011365 Location: 1818917..1935901 Organism: Gluconacetobacter diazotrophicus PAl 5 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GDIA_RS08190 () | 1814319..1814609 | + | 291 | WP_012222305.1 | CRISPR-associated endonuclease Cas2 | - |
| GDIA_RS08200 () | 1818078..1819306 | + | 1229 | Protein_1651 | IS3-like element ISGdi14 family transposase | - |
| GDIA_RS08205 () | 1820210..1822075 | - | 1866 | WP_043459250.1 | ATM1-type heavy metal exporter | VF |
| GDIA_RS08210 () | 1822299..1822985 | + | 687 | WP_012553891.1 | endonuclease III | - |
| GDIA_RS08215 () | 1822989..1825112 | - | 2124 | WP_012222299.1 | ComEC/Rec2 family competence protein | - |
| GDIA_RS08220 () | 1825295..1826695 | + | 1401 | WP_012222298.1 | glutamate--tRNA ligase | - |
| GDIA_RS08225 () | 1826692..1827657 | + | 966 | WP_012222297.1 | Aspartate carbamoyltransferase | VF |
| GDIA_RS08230 () | 1827654..1828946 | + | 1293 | WP_012553893.1 | dihydroorotase | - |
| GDIA_RS08235 () | 1828943..1829581 | + | 639 | WP_012553894.1 | glycerol-3-phosphate 1-O-acyltransferase PlsY | - |
| GDIA_RS08240 () | 1829578..1830765 | + | 1188 | WP_012553895.1 | DNA-processing protein DprA | - |
| GDIA_RS08245 () | 1830787..1833561 | + | 2775 | WP_012553896.1 | type I DNA topoisomerase | - |
| GDIA_RS08250 () | 1833564..1835909 | + | 2346 | WP_012222292.1 | ribonuclease R | - |
| GDIA_RS08255 () | 1835909..1837699 | + | 1791 | WP_012553897.1 | PDZ domain-containing protein | - |
| GDIA_RS08260 () | 1837718..1838056 | + | 339 | WP_012553898.1 | DUF1491 family protein | - |
| GDIA_RS08265 () | 1838269..1839411 | + | 1143 | WP_012222289.1 | Outer membrane protein | VF |
| GDIA_RS08270 () | 1839440..1840345 | + | 906 | WP_012222288.1 | LysR family transcriptional regulator | - |
| GDIA_RS08275 () | 1840394..1841368 | - | 975 | WP_144880369.1 | alpha/beta hydrolase | - |
| GDIA_RS08280 () | 1841529..1843496 | + | 1968 | WP_041249210.1 | FUSC family protein | - |
| GDIA_RS08285 () | 1843517..1844752 | - | 1236 | WP_173363390.1 | MFS transporter | - |
| GDIA_RS08290 () | 1845088..1845627 | - | 540 | WP_012222284.1 | phosphoglycerate mutase family protein | - |
| GDIA_RS08295 () | 1845624..1846655 | - | 1032 | WP_173363359.1 | threonine-phosphate decarboxylase | - |
| GDIA_RS08300 () | 1846776..1848254 | - | 1479 | WP_012222282.1 | cobyric acid synthase | - |
| GDIA_RS08305 () | 1848254..1848877 | - | 624 | WP_012222281.1 | cob(I)yrinic acid a,c-diamide adenosyltransferase | - |
| GDIA_RS08315 () | 1849948..1850451 | + | 504 | WP_012222279.1 | glycine zipper family protein | - |
| GDIA_RS08320 () | 1850653..1850889 | - | 237 | Protein_1674 | IS3 family transposase ISRle5 | Transposase |
| GDIA_RS08325 () | 1850943..1851452 | - | 510 | Protein_1675 | IS630 family transposase ISGdi5 | Transposase |
| GDIA_RS08330 () | 1851749..1852888 | - | 1140 | WP_012553902.1 | IS110 family transposase ISGdi7 | Transposase |
| GDIA_RS18495 () | 1852968..1853530 | - | 563 | Protein_1677 | IS630 family transposase ISGdi5 | Transposase |
| GDIA_RS08340 () | 1853616..1854818 | - | 1203 | Protein_1678 | IS3 family transposase ISGdi14 | Transposase |
| GDIA_RS19140 () | 1854836..1855054 | + | 219 | WP_157864168.1 | hypothetical protein | - |
| GDIA_RS08355 () | 1855108..1856451 | + | 1344 | WP_012553903.1 | IS1182 family transposase ISGdi13 | Transposase |
| GDIA_RS08360 () | 1856529..1857365 | - | 837 | WP_012222260.1 | IS5 family transposase ISGdi1 | Transposase |
| GDIA_RS08365 () | 1857886..1858128 | - | 243 | Protein_1682 | chromosome partitioning protein ParB | - |
| GDIA_RS08370 () | 1858187..1859179 | + | 993 | WP_012553292.1 | IS481 family transposase ISGdi9 | Transposase |
| GDIA_RS19145 () | 1859248..1859496 | + | 249 | WP_144880567.1 | hypothetical protein | - |
| GDIA_RS08375 () | 1859656..1860141 | - | 486 | WP_012553904.1 | MarR family transcriptional regulator | - |
| GDIA_RS08380 () | 1860338..1860766 | + | 429 | WP_012553905.1 | organic hydroperoxide resistance protein | - |
| GDIA_RS08385 () | 1860837..1861223 | + | 387 | WP_012553906.1 | MAPEG family protein | - |
| GDIA_RS08390 () | 1861810..1862424 | + | 615 | WP_012553907.1 | Transcriptional regulator AcuR | VF |
| GDIA_RS08395 () | 1862498..1863481 | + | 984 | WP_012553908.1 | Acrylyl-CoA reductase AcuI | VF |
| GDIA_RS08400 () | 1863891..1864526 | - | 636 | WP_012553909.1 | HD domain-containing protein | - |
| GDIA_RS08405 () | 1864761..1865531 | - | 771 | WP_012553910.1 | IS21 family transposase ISGdi17 | Transposase |
| GDIA_RS08410 () | 1865687..1866745 | - | 1059 | WP_012222646.1 | IS481 family transposase ISGdi10 | Transposase |
| GDIA_RS08415 () | 1866760..1867389 | + | 630 | WP_049762892.1 | DUF3363 domain-containing protein | - |
| GDIA_RS08420 () | 1867505..1867954 | + | 450 | WP_012553911.1 | hypothetical protein | - |
| GDIA_RS08425 () | 1867912..1868847 | - | 936 | WP_012553912.1 | LysR family transcriptional regulator | - |
| GDIA_RS18505 () | 1868851..1869726 | - | 876 | WP_012553913.1 | MBL fold metallo-hydrolase | - |
| GDIA_RS08435 () | 1869769..1870746 | - | 978 | WP_012553914.1 | aldo/keto reductase | - |
| GDIA_RS18510 () | 1870898..1871842 | + | 945 | WP_012553915.1 | HTH-type transcriptional regulator PgrR | VF |
| GDIA_RS08440 () | 1872219..1872584 | + | 366 | WP_012553916.1 | DUF2384 domain-containing protein | - |
| GDIA_RS18515 () | 1872581..1873099 | + | 519 | WP_012553917.1 | RES domain-containing protein | - |
| GDIA_RS08445 () | 1873360..1873692 | + | 333 | WP_043458825.1 | DUF4238 domain-containing protein | - |
| GDIA_RS08460 () | 1874861..1875469 | + | 609 | WP_012553919.1 | Oxidoreductase UcpA | VF |
| GDIA_RS08465 () | 1875535..1876230 | + | 696 | WP_012553920.1 | glutathione S-transferase N-terminal domain-containing protein | - |
| GDIA_RS08470 () | 1876249..1877124 | + | 876 | WP_012553921.1 | glutathione-dependent disulfide-bond oxidoreductase | - |
| GDIA_RS08475 () | 1877198..1877839 | - | 642 | WP_012553922.1 | DUF1109 domain-containing protein | - |
| GDIA_RS08480 () | 1877829..1878359 | - | 531 | WP_043458827.1 | sigma-70 family RNA polymerase sigma factor | - |
| GDIA_RS08485 () | 1878377..1879096 | - | 720 | WP_012553924.1 | Peptide methionine sulfoxide reductase MsrA | VF |
| GDIA_RS08490 () | 1879110..1879571 | - | 462 | WP_012553925.1 | Peptide methionine sulfoxide reductase MsrB | VF |
| GDIA_RS08495 () | 1879750..1880403 | + | 654 | WP_012553926.1 | cytochrome b/b6 domain-containing protein | - |
| GDIA_RS08500 () | 1880400..1881149 | + | 750 | WP_012553927.1 | molybdopterin-dependent oxidoreductase | - |
| GDIA_RS08505 () | 1881253..1881555 | + | 303 | WP_012553928.1 | pentapeptide MXKDX repeat protein | - |
| GDIA_RS08510 () | 1881718..1882323 | - | 606 | WP_012553929.1 | nitroreductase family protein | - |
| GDIA_RS18080 () | 1882373..1882659 | - | 287 | Protein_1714 | fumarylacetoacetate hydrolase family protein | - |
| GDIA_RS08520 () | 1882721..1883446 | - | 726 | WP_012553930.1 | pirin family protein | - |
| GDIA_RS08525 () | 1883443..1884984 | - | 1542 | WP_144880466.1 | efflux transporter outer membrane subunit | - |
| GDIA_RS08530 () | 1885019..1886095 | - | 1077 | WP_012553932.1 | putative multidrug resistance protein EmrK | VF |
| GDIA_RS19445 () | 1886155..1886316 | - | 162 | WP_012553933.1 | hypothetical protein | - |
| GDIA_RS08535 () | 1886349..1888010 | - | 1662 | WP_012553934.1 | MFS transporter | - |
| GDIA_RS08540 () | 1888265..1889218 | + | 954 | WP_012553935.1 | LysR family transcriptional regulator | - |
| GDIA_RS08545 () | 1889206..1889964 | - | 759 | WP_012553936.1 | FadR family transcriptional regulator | - |
| GDIA_RS08550 () | 1890169..1890768 | + | 600 | WP_012553937.1 | glutathione S-transferase | - |
| GDIA_RS08555 () | 1890786..1891355 | + | 570 | WP_049763009.1 | hypothetical protein | - |
| GDIA_RS08560 () | 1891345..1892262 | - | 918 | WP_012553939.1 | HTH-type transcriptional regulator DmlR | VF |
| GDIA_RS08565 () | 1892364..1893155 | + | 792 | WP_012553940.1 | NAD(P)H-dependent oxidoreductase | - |
| GDIA_RS08570 () | 1893213..1893950 | + | 738 | Protein_1726 | HTH-type transcriptional regulator BenM | VF |
| GDIA_RS08575 () | 1894222..1895142 | + | 921 | WP_012553942.1 | ketopantoate reductase family protein | - |
| GDIA_RS08580 () | 1895299..1896438 | - | 1140 | WP_144880467.1 | MFS transporter | - |
| GDIA_RS08585 () | 1896512..1896856 | + | 345 | WP_012553944.1 | helix-turn-helix domain-containing protein | - |
| GDIA_RS18520 () | 1896918..1897975 | + | 1058 | WP_157864088.1 | IS630 family transposase ISGdi4 | Transposase |
| GDIA_RS18525 () | 1898384..1899322 | + | 939 | WP_144880580.1 | LysR family transcriptional regulator | - |
| GDIA_RS08600 () | 1899442..1900674 | + | 1233 | WP_012553946.1 | MFS transporter | - |
| GDIA_RS08610 () | 1900984..1902101 | + | 1118 | WP_157864127.1 | IS3 family transposase ISGdi11 | Transposase |
| GDIA_RS18530 () | 1902124..1902363 | + | 240 | WP_081434714.1 | IS630 transposase-related protein | - |
| GDIA_RS08620 () | 1902444..1903214 | - | 771 | WP_012553061.1 | IS21 family transposase ISGdi17 | Transposase |
| GDIA_RS08635 () | 1904416..1905063 | - | 648 | Protein_1737 | IS21 family transposase ISGdi17 | Transposase |
| GDIA_RS08640 () | 1905118..1906176 | - | 1059 | WP_012222646.1 | IS481 family transposase ISGdi10 | Transposase |
| GDIA_RS08645 () | 1906294..1907142 | - | 849 | Protein_1739 | IS21 family transposase ISGdi17 | Transposase |
| GDIA_RS19150 () | 1907208..1907591 | + | 384 | WP_157864170.1 | SMEK domain-containing protein | - |
| GDIA_RS08660 () | 1908824..1909660 | + | 837 | WP_012222260.1 | IS5 family transposase ISGdi1 | Transposase |
| GDIA_RS08665 () | 1909799..1911049 | - | 1251 | WP_012553139.1 | IS701 family transposase ISGdi12 | Transposase |
| GDIA_RS19160 () | 1911122..1911583 | + | 462 | WP_162013726.1 | hypothetical protein | - |
| GDIA_RS08680 () | 1911808..1913463 | + | 1656 | WP_081434715.1 | DUF2326 domain-containing protein | - |
| GDIA_RS18545 () | 1913525..1914582 | + | 1058 | WP_157864088.1 | IS630 family transposase ISGdi4 | Transposase |
| GDIA_RS08695 () | 1914840..1915265 | - | 426 | WP_012553949.1 | hypothetical protein | - |
| GDIA_RS08700 () | 1915271..1917253 | - | 1983 | WP_012553950.1 | Conjugal transfer protein TraG | VF |
| GDIA_RS08705 () | 1917411..1917701 | - | 291 | WP_012553951.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GDIA_RS08710 () | 1917694..1917933 | - | 240 | WP_211205851.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| GDIA_RS08715 () | 1918039..1918902 | - | 864 | WP_012553953.1 | LysR family transcriptional regulator | - |
| GDIA_RS08720 () | 1918978..1919589 | + | 612 | Protein_1752 | 4-hydroxythreonine-4-phosphate dehydrogenase PdxA | - |
| GDIA_RS08725 () | 1919627..1920877 | + | 1251 | WP_012553139.1 | IS701 family transposase ISGdi12 | Transposase |
| GDIA_RS08730 () | 1920993..1921397 | + | 405 | Protein_1754 | D-threonate 4-phosphate dehydrogenase | VF |
| GDIA_RS08735 () | 1921394..1922074 | + | 681 | WP_012553954.1 | hypothetical protein | - |
| GDIA_RS08740 () | 1922089..1922451 | + | 363 | WP_012553955.1 | cupin domain-containing protein | - |
| GDIA_RS08745 () | 1922510..1924264 | - | 1755 | WP_012553956.1 | VirD2 family relaxase/mobilization nuclease | - |
| GDIA_RS08750 () | 1924829..1925917 | - | 1089 | WP_012222184.1 | IS110 family transposase ISGdi15 | Transposase |
| GDIA_RS08755 () | 1926596..1927078 | - | 483 | WP_012224920.1 | DUF2840 domain-containing protein | - |
| GDIA_RS08760 () | 1927161..1927733 | + | 573 | WP_041249340.1 | hypothetical protein | - |
| GDIA_RS08765 () | 1928479..1929111 | + | 633 | WP_041249339.1 | hypothetical protein | - |
| GDIA_RS08770 () | 1929685..1930764 | + | 1080 | WP_012224911.1 | IS5 family transposase ISMex35 | Transposase |
| GDIA_RS18565 () | 1930870..1931013 | - | 144 | Protein_1763 | transposase | - |
| GDIA_RS08775 () | 1931051..1931875 | + | 825 | WP_012553959.1 | IS5 family transposase ISGdi2 | Transposase |
| GDIA_RS18570 () | 1931891..1932121 | - | 231 | Protein_1765 | transposase | - |
| GDIA_RS08780 () | 1932240..1933298 | + | 1059 | WP_012222646.1 | IS481 family transposase ISGdi10 | Transposase |
| GDIA_RS08785 () | 1933349..1933798 | - | 450 | Protein_1767 | IS5 family transposase ISGdi1 | Transposase |
| GDIA_RS08790 () | 1933935..1934492 | + | 558 | WP_012223947.1 | phosphate-starvation-inducible PsiE family protein | - |
| GDIA_RS08800 () | 1934874..1936102 | + | 1229 | WP_157864211.1 | IS3-like element ISGdi14 family transposase | - |
| GDIA_RS08805 () | 1936280..1936762 | - | 483 | WP_012223951.1 | Hsp20 family protein | - |
| GDIA_RS08815 () | 1937085..1937909 | + | 825 | WP_012553437.1 | IS5-like element ISGdi2 family transposase | - |
| GDIA_RS19520 () | 1938126..1938227 | + | 102 | WP_124296136.1 | YXWGXW repeat-containing protein | - |
| GDIA_RS08820 () | 1938748..1938996 | + | 249 | WP_010511782.1 | hypothetical protein | - |
| GDIA_RS08825 () | 1939105..1939368 | + | 264 | WP_010511780.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| GDIA_RS08830 () | 1939361..1939705 | + | 345 | WP_012223960.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| GDIA_RS08835 () | 1939738..1940415 | + | 678 | Protein_1776 | recombinase family protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|