MGE detailed information
MGE type: Integrative_Conjugative_Elements MGE length: 47778 bp
Accession: NC_010803 Location: 1423740..1471517 Organism: Chlorobium limicola DSM 245 Replicon: chromosome
Accession: NC_010803 Location: 1423740..1471517 Organism: Chlorobium limicola DSM 245 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CLIM_RS06585 () | 1419863..1421008 | - | 1146 | WP_012466259.1 | NADP-dependent malic enzyme | - |
| CLIM_RS06590 () | 1421554..1421823 | - | 270 | WP_150081833.1 | hypothetical protein | - |
| CLIM_RS06595 () | 1421838..1422836 | - | 999 | WP_012466261.1 | trypsin-like peptidase domain-containing protein | - |
| CLIM_RS06600 () | 1422965..1424200 | - | 1236 | WP_012466262.1 | exonuclease SbcCD subunit D C-terminal domain-containing protein | - |
| CLIM_RS06605 () | 1424202..1425029 | - | 828 | WP_041465700.1 | potassium channel family protein | - |
| CLIM_RS06615 () | 1425190..1425387 | - | 198 | WP_012466264.1 | hypothetical protein | - |
| CLIM_RS06620 () | 1425897..1426622 | - | 726 | WP_012466265.1 | hypothetical protein | - |
| CLIM_RS06625 () | 1426744..1427097 | - | 354 | WP_150081840.1 | hypothetical protein | - |
| CLIM_RS06630 () | 1427679..1430054 | - | 2376 | WP_012466267.1 | phosphoketolase family protein | - |
| CLIM_RS06635 () | 1430156..1431349 | - | 1194 | WP_012466268.1 | acetate/propionate family kinase | - |
| CLIM_RS06640 () | 1431720..1431962 | + | 243 | WP_012466269.1 | ribbon-helix-helix domain-containing protein | - |
| CLIM_RS13010 () | 1431947..1432150 | + | 204 | Protein_1284 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| CLIM_RS06650 () | 1432414..1432647 | - | 234 | WP_041465704.1 | hypothetical protein | - |
| CLIM_RS06655 () | 1432816..1435365 | + | 2550 | WP_041465942.1 | aminopeptidase N | - |
| CLIM_RS06660 () | 1435495..1435704 | + | 210 | WP_081429881.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| CLIM_RS12725 () | 1435745..1436098 | + | 354 | WP_150081611.1 | GNAT family N-acetyltransferase | - |
| CLIM_RS06670 () | 1436612..1436920 | + | 309 | WP_012466275.1 | type II toxin-antitoxin system MqsR family toxin | Toxin Detail |
| CLIM_RS06675 () | 1436958..1437368 | + | 411 | WP_012466276.1 | type II toxin-antitoxin system MqsA family antitoxin | Antitoxin Detail |
| CLIM_RS06680 () | 1437546..1437806 | - | 261 | WP_012466277.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| CLIM_RS06685 () | 1437790..1438014 | - | 225 | WP_041465944.1 | ribbon-helix-helix protein, CopG family | Antitoxin Detail |
| CLIM_RS06695 () | 1438462..1438731 | + | 270 | WP_012466280.1 | DUF4160 domain-containing protein | - |
| CLIM_RS06700 () | 1438735..1438977 | + | 243 | WP_012466281.1 | DUF2442 domain-containing protein | - |
| CLIM_RS06705 () | 1439081..1439350 | + | 270 | WP_041465706.1 | hypothetical protein | - |
| CLIM_RS06710 () | 1439347..1439646 | + | 300 | WP_012466283.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| CLIM_RS06715 () | 1439785..1440120 | - | 336 | WP_041465707.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| CLIM_RS06720 () | 1440117..1440329 | - | 213 | WP_012466285.1 | antitoxin MazE family protein | Antitoxin Detail |
| CLIM_RS06725 () | 1440927..1441169 | + | 243 | WP_012466286.1 | ribbon-helix-helix domain-containing protein | - |
| CLIM_RS06730 () | 1441154..1441492 | + | 339 | WP_012466287.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| CLIM_RS06735 () | 1441537..1441785 | - | 249 | WP_012466288.1 | hypothetical protein | - |
| CLIM_RS12730 () | 1441999..1444902 | - | 2904 | WP_012466289.1 | DEAD/DEAH box helicase family protein | - |
| CLIM_RS06745 () | 1445255..1446250 | + | 996 | Protein_1303 | IS30 family transposase ISAeca1 | Transposase |
| CLIM_RS06755 () | 1446600..1449194 | - | 2595 | WP_012466291.1 | ATP-binding protein | - |
| CLIM_RS06760 () | 1449187..1450830 | - | 1644 | WP_012466292.1 | Nucleoside phosphorylase-like protein | - |
| CLIM_RS06765 () | 1451157..1451477 | - | 321 | Protein_1306 | ATP-binding domain-containing protein | - |
| CLIM_RS06770 () | 1451557..1452522 | - | 966 | WP_012466293.1 | transposase | - |
| CLIM_RS06775 () | 1452865..1454631 | - | 1767 | WP_012466295.1 | exodeoxyribonuclease V subunit alpha | - |
| CLIM_RS06780 () | 1454628..1458308 | - | 3681 | WP_012466296.1 | exodeoxyribonuclease V subunit beta | - |
| CLIM_RS06785 () | 1458305..1461538 | - | 3234 | WP_012466297.1 | exodeoxyribonuclease V subunit gamma | - |
| CLIM_RS06790 () | 1461535..1462053 | - | 519 | WP_012466298.1 | PH domain-containing protein | - |
| CLIM_RS06795 () | 1462084..1463412 | - | 1329 | WP_012466299.1 | DUF389 domain-containing protein | - |
| CLIM_RS06800 () | 1463569..1464804 | + | 1236 | WP_041465710.1 | serpin family protein | - |
| CLIM_RS06805 () | 1464809..1466230 | + | 1422 | WP_012466301.1 | DNA photolyase family protein | - |
| CLIM_RS06810 () | 1466380..1466559 | + | 180 | WP_041465711.1 | HTH domain-containing protein | - |
| CLIM_RS06815 () | 1466645..1468090 | + | 1446 | WP_012466303.1 | DUF4403 family protein | - |
| CLIM_RS06820 () | 1468111..1468608 | - | 498 | WP_012466304.1 | YbjN domain-containing protein | - |
| CLIM_RS06825 () | 1469030..1469338 | + | 309 | WP_012466305.1 | HigA family addiction module antidote protein | - |
| CLIM_RS13700 () | 1469507..1469665 | + | 159 | WP_190275061.1 | hypothetical protein | - |
| CLIM_RS06830 () | 1470075..1471301 | + | 1227 | WP_012466306.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| CLIM_RS06835 () | 1471328..1472620 | - | 1293 | WP_012466307.1 | DNA recombination protein RmuC | - |
| CLIM_RS06840 () | 1473049..1474053 | - | 1005 | WP_012466308.1 | bifunctional methionine sulfoxide reductase B/A protein | - |
| CLIM_RS06845 () | 1474219..1476339 | + | 2121 | WP_012466309.1 | thioredoxin domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|