MGE detailed information
MGE type: IScluster/Tn MGE length: 29737 bp
Accession: NC_010660 Location: 149861..179597 Organism: Shigella boydii CDC 3083-94 Replicon: plasmid pBS512_211
Accession: NC_010660 Location: 149861..179597 Organism: Shigella boydii CDC 3083-94 Replicon: plasmid pBS512_211
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SBBS512_RS01265 () | 145918..149226 | + | 3309 | WP_001071792.1 | outer membrane autotransporter IcsA | - |
| SBBS512_RS27815 () | 149412..149835 | + | 424 | Protein_178 | fimbria/pilus outer membrane usher protein | - |
| SBBS512_RS01275 () | 149861..151074 | + | 1214 | WP_167549328.1 | IS3 family transposase IS629 | Transposase |
| SBBS512_RS01280 () | 151415..153067 | + | 1653 | WP_000612524.1 | bifunctional UDP-sugar hydrolase/5'-nucleotidase UshA | - |
| SBBS512_RS27830 () | 153078..153248 | - | 171 | Protein_181 | transposase | - |
| SBBS512_RS01290 () | 153421..153818 | + | 398 | Protein_182 | IS1 family transposase IS1F | Transposase |
| SBBS512_RS01295 () | 153911..154291 | + | 381 | WP_001333468.1 | IS66 family transposase ISEc8 | Transposase |
| SBBS512_RS01300 () | 154288..154635 | + | 348 | WP_000612625.1 | IS66 family transposase ISKpn24 | Transposase |
| SBBS512_RS01305 () | 154684..156222 | + | 1539 | WP_000016886.1 | IS66 family transposase ISEc22 | Transposase |
| SBBS512_RS01310 () | 156259..156567 | + | 309 | Protein_186 | IS1 family transposase IS1X2 | Transposase |
| SBBS512_RS27840 () | 156607..156726 | - | 120 | Protein_187 | transposase domain-containing protein | - |
| SBBS512_RS27845 () | 156800..157090 | - | 291 | Protein_188 | reverse transcriptase | - |
| SBBS512_RS27855 () | 157162..157293 | + | 132 | Protein_189 | IS3 family transposase IS911 | Transposase |
| SBBS512_RS01320 () | 157337..158550 | - | 1214 | Protein_190 | IS3 family transposase IS629 | Transposase |
| SBBS512_RS01330 () | 158604..159643 | + | 1040 | Protein_191 | IS3 family transposase ISLad1 | Transposase |
| SBBS512_RS01335 () | 160662..161621 | + | 960 | WP_000921951.1 | plasmid segregation protein ParM | - |
| SBBS512_RS01340 () | 161621..162016 | + | 396 | WP_000445931.1 | plasmid partitioning/stability family protein | - |
| SBBS512_RS01345 () | 162184..163408 | - | 1225 | Protein_194 | IS3 family transposase IS2 | Transposase |
| SBBS512_RS01360 () | 163501..163866 | + | 366 | WP_073691780.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | - |
| SBBS512_RS30900 () | 163912..164756 | + | 845 | Protein_196 | IS5 family transposase ISSfl7 | Transposase |
| SBBS512_RS01370 () | 164928..165677 | - | 750 | WP_000828661.1 | phosphatase PAP2 family protein | - |
| SBBS512_RS27900 () | 166040..166273 | + | 234 | Protein_198 | IS3 family transposase IS600 | Transposase |
| SBBS512_RS01380 () | 166286..166978 | + | 693 | Protein_199 | group II intron reverse transcriptase/maturase | - |
| SBBS512_RS01390 () | 167033..168246 | + | 1214 | WP_167549322.1 | IS3 family transposase IS629 | Transposase |
| SBBS512_RS01395 () | 168322..168594 | - | 273 | WP_012421738.1 | hypothetical protein | - |
| SBBS512_RS01405 () | 169187..169405 | + | 219 | WP_000813626.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| SBBS512_RS01410 () | 169407..169712 | + | 306 | WP_001159860.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| SBBS512_RS32765 () | 169748..169843 | + | 96 | Protein_204 | transposase domain-containing protein | - |
| SBBS512_RS01415 () | 170105..171742 | + | 1638 | WP_012421769.1 | E3 ubiquitin-protein ligase ipaH9.8 | VF |
| SBBS512_RS01420 () | 171950..172219 | + | 270 | WP_000079956.1 | hypothetical protein | - |
| SBBS512_RS01425 () | 172471..172956 | + | 486 | WP_000705603.1 | Protein kinase OspG | VF |
| SBBS512_RS01430 () | 172971..173668 | - | 698 | Protein_208 | IS1 family transposase IS1X2 | Transposase |
| SBBS512_RS01440 () | 173875..173991 | + | 117 | WP_004996477.1 | hypothetical protein | - |
| SBBS512_RS01445 () | 174355..175197 | + | 843 | WP_000931198.1 | polysaccharide deacetylase family protein | - |
| SBBS512_RS27325 () | 175200..176288 | + | 1089 | WP_005027207.1 | putative hexosyltransferase CapU | - |
| SBBS512_RS01455 () | 176293..177243 | + | 951 | WP_012421771.1 | virulence factor VirK | - |
| SBBS512_RS01460 () | 177308..178252 | + | 945 | WP_012421740.1 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| SBBS512_RS01465 () | 178407..179078 | - | 672 | Protein_214 | IS630 family transposase IS630 | Transposase |
| SBBS512_RS01470 () | 179094..179791 | - | 698 | Protein_215 | IS1 family transposase IS1X2 | Transposase |
| SBBS512_RS01485 () | 180039..182245 | + | 2207 | Protein_216 | type IV conjugative transfer system coupling protein TraD | - |
| SBBS512_RS01490 () | 182254..182652 | - | 399 | WP_000911319.1 | tRNA(fMet)-specific endonuclease VapC | Toxin Detail |
| SBBS512_RS01495 () | 182652..182879 | - | 228 | WP_000450530.1 | toxin-antitoxin system antitoxin VapB | Antitoxin Detail |
| SBBS512_RS33695 () | 183083..183268 | + | 186 | WP_171537368.1 | relaxase domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|