MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 181736 bp
Accession: NC_010580 Location: 1..181736 Organism: Beijerinckia indica subsp. indica ATCC 9039 Replicon: plasmid pBIND01
Accession: NC_010580 Location: 1..181736 Organism: Beijerinckia indica subsp. indica ATCC 9039 Replicon: plasmid pBIND01
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BIND_RS18705 () | 46..585 | + | 540 | WP_012382842.1 | DotD/TraH family lipoprotein | - |
| BIND_RS18710 () | 578..1543 | + | 966 | WP_012382843.1 | hypothetical protein | VF |
| BIND_RS18715 () | 1540..2682 | + | 1143 | WP_012382844.1 | Twitching mobility protein | VF |
| BIND_RS18720 () | 2682..2930 | + | 249 | WP_012382845.1 | hypothetical protein | VF |
| BIND_RS20330 () | 2927..3355 | + | 429 | WP_012382846.1 | hypothetical protein | - |
| BIND_RS18730 () | 3364..3876 | + | 513 | WP_012382847.1 | hypothetical protein | VF |
| BIND_RS18735 () | 3879..5024 | + | 1146 | WP_210160547.1 | hypothetical protein | - |
| BIND_RS21490 () | 5276..5578 | + | 303 | WP_148210824.1 | hypothetical protein | - |
| BIND_RS18745 () | 5588..5854 | + | 267 | WP_012382850.1 | hypothetical protein | - |
| BIND_RS18750 () | 5886..8246 | + | 2361 | WP_012382851.1 | hypothetical protein | VF |
| BIND_RS18755 () | 8344..8592 | + | 249 | WP_012382852.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| BIND_RS18760 () | 8582..8869 | + | 288 | WP_012382853.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BIND_RS18765 () | 9808..10167 | + | 360 | WP_012382854.1 | hypothetical protein | - |
| BIND_RS18770 () | 10218..11063 | - | 846 | WP_012382855.1 | hypothetical protein | VF |
| BIND_RS18775 () | 11154..11570 | + | 417 | WP_012382856.1 | hypothetical protein | - |
| BIND_RS18780 () | 11638..14844 | - | 3207 | WP_012382857.1 | hypothetical protein | Relaxase |
| BIND_RS18785 () | 14841..15140 | - | 300 | WP_012382858.1 | hypothetical protein | - |
| BIND_RS18790 () | 15688..16098 | + | 411 | WP_012382859.1 | hypothetical protein | - |
| BIND_RS18795 () | 16129..24864 | + | 8736 | WP_012382860.1 | hypothetical protein | VF |
| BIND_RS18800 () | 24960..27122 | + | 2163 | WP_012382861.1 | Toxin RTX-I translocation ATP-binding protein | VF |
| BIND_RS18805 () | 27119..28564 | + | 1446 | WP_012382862.1 | Leukotoxin export protein LtxD | VF |
| BIND_RS21720 () | 28638..28784 | - | 147 | WP_158304408.1 | hypothetical protein | - |
| BIND_RS18810 () | 28835..29197 | - | 363 | WP_012382863.1 | Bro-N domain-containing protein | - |
| BIND_RS18815 () | 29579..30187 | + | 609 | WP_041779062.1 | hypothetical protein | - |
| BIND_RS18820 () | 30201..30986 | + | 786 | WP_012382865.1 | hypothetical protein | - |
| BIND_RS18825 () | 30959..31963 | + | 1005 | WP_012382866.1 | hypothetical protein | - |
| BIND_RS18830 () | 31956..32573 | + | 618 | WP_012382867.1 | hypothetical protein | - |
| BIND_RS20905 () | 32893..33387 | + | 495 | WP_148210837.1 | BPSL0067 family protein | - |
| BIND_RS20910 () | 33371..33709 | + | 339 | WP_012382869.1 | hypothetical protein | - |
| BIND_RS18840 () | 33800..34690 | + | 891 | WP_012382870.1 | hypothetical protein | - |
| BIND_RS18845 () | 34705..35100 | + | 396 | WP_012382871.1 | hypothetical protein | - |
| BIND_RS18850 () | 35259..35504 | + | 246 | WP_012382872.1 | type II toxin-antitoxin system VapB family antitoxin | - |
| BIND_RS18855 () | 35504..35902 | + | 399 | WP_012382873.1 | type II toxin-antitoxin system VapC family toxin | - |
| BIND_RS18860 () | 36577..36903 | - | 327 | WP_012382876.1 | DUF736 domain-containing protein | - |
| BIND_RS21495 () | 37773..38009 | + | 237 | WP_148210825.1 | hypothetical protein | - |
| BIND_RS18870 () | 38096..38281 | - | 186 | WP_012382879.1 | hypothetical protein | - |
| BIND_RS18875 () | 38374..38691 | - | 318 | WP_012382880.1 | DUF736 domain-containing protein | - |
| BIND_RS18880 () | 39773..40366 | - | 594 | WP_012382882.1 | Uma2 family endonuclease | - |
| BIND_RS18885 () | 40420..40791 | - | 372 | WP_012382883.1 | hypothetical protein | - |
| BIND_RS18890 () | 41112..41711 | - | 600 | WP_012382885.1 | hypothetical protein | - |
| BIND_RS18900 () | 42705..43283 | + | 579 | WP_012382886.1 | hypothetical protein | - |
| BIND_RS18905 () | 43333..43887 | - | 555 | WP_012382887.1 | hypothetical protein | - |
| BIND_RS18910 () | 44013..44210 | - | 198 | WP_012382888.1 | hypothetical protein | - |
| BIND_RS18915 () | 44264..44485 | - | 222 | WP_012382889.1 | hypothetical protein | - |
| BIND_RS18920 () | 44508..44867 | - | 360 | WP_012382890.1 | hypothetical protein | - |
| BIND_RS18925 () | 44946..45140 | - | 195 | WP_012382891.1 | hypothetical protein | - |
| BIND_RS18930 () | 45116..45556 | - | 441 | WP_012382892.1 | hypothetical protein | - |
| BIND_RS18935 () | 45557..45823 | - | 267 | WP_012382893.1 | hypothetical protein | - |
| BIND_RS18940 () | 45858..47555 | - | 1698 | WP_012382894.1 | ParB N-terminal domain-containing protein | - |
| BIND_RS20930 () | 47781..48314 | - | 534 | WP_081433838.1 | hypothetical protein | - |
| BIND_RS18950 () | 48400..48960 | - | 561 | WP_012382895.1 | hypothetical protein | - |
| BIND_RS18955 () | 49061..54142 | - | 5082 | WP_012382896.1 | lactate dehydrogenase | - |
| BIND_RS18960 () | 54228..54620 | - | 393 | WP_012382897.1 | hypothetical protein | - |
| BIND_RS18965 () | 54624..54950 | - | 327 | WP_012382898.1 | hypothetical protein | - |
| BIND_RS18970 () | 55225..55566 | - | 342 | WP_012382899.1 | hypothetical protein | - |
| BIND_RS18975 () | 55665..56031 | - | 367 | Protein_55 | hypothetical protein | - |
| BIND_RS18980 () | 56028..56567 | - | 540 | WP_012382901.1 | hypothetical protein | - |
| BIND_RS21500 () | 56566..57057 | + | 492 | WP_148210827.1 | hypothetical protein | - |
| BIND_RS21505 () | 57330..57590 | + | 261 | WP_148210828.1 | hypothetical protein | - |
| BIND_RS20940 () | 57681..57950 | - | 270 | WP_012382905.1 | hypothetical protein | - |
| BIND_RS21725 () | 58763..58915 | - | 153 | WP_158304409.1 | hypothetical protein | - |
| BIND_RS18995 () | 58930..59292 | - | 363 | WP_012382907.1 | hypothetical protein | - |
| BIND_RS19005 () | 59506..61539 | - | 2034 | WP_050764246.1 | UvrD-helicase domain-containing protein | - |
| BIND_RS21510 () | 61586..61894 | - | 309 | WP_041779070.1 | hypothetical protein | - |
| BIND_RS19015 () | 61878..62198 | - | 321 | WP_012382910.1 | hypothetical protein | - |
| BIND_RS19020 () | 62195..63139 | - | 945 | WP_012382911.1 | DUF3991 domain-containing protein | - |
| BIND_RS20345 () | 63770..64204 | + | 435 | WP_012382913.1 | WGR domain-containing protein | - |
| BIND_RS19035 () | 64255..64704 | + | 450 | WP_012382914.1 | translesion error-prone DNA polymerase V autoproteolytic subunit | - |
| BIND_RS19040 () | 64704..65966 | + | 1263 | WP_012382915.1 | Y-family DNA polymerase | - |
| BIND_RS19045 () | 66033..66743 | - | 711 | WP_012382916.1 | hypothetical protein | - |
| BIND_RS19050 () | 66740..67384 | - | 645 | WP_012382917.1 | ParA family protein | - |
| BIND_RS20950 () | 67775..68208 | + | 434 | Protein_72 | DUF1016 family protein | - |
| BIND_RS19060 () | 68433..68654 | - | 222 | Protein_73 | aldo/keto reductase | - |
| BIND_RS19065 () | 68746..69681 | + | 936 | Protein_74 | IS630 family transposase | - |
| BIND_RS19070 () | 69815..70114 | + | 300 | WP_012382918.1 | type II toxin-antitoxin system RelB/DinJ family antitoxin | Antitoxin Detail |
| BIND_RS19075 () | 70140..70391 | + | 252 | WP_081433840.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| BIND_RS20960 () | 71052..71810 | - | 759 | Protein_77 | IS5 family transposase | - |
| BIND_RS19085 () | 71869..73326 | - | 1458 | WP_012382921.1 | hypothetical protein | - |
| BIND_RS19090 () | 73316..74650 | - | 1335 | WP_012382922.1 | DUF4365 domain-containing protein | - |
| BIND_RS19095 () | 74987..75784 | + | 798 | WP_012382923.1 | hypothetical protein | - |
| BIND_RS19100 () | 75777..79088 | + | 3312 | WP_012382924.1 | DEAD/DEAH box helicase | - |
| BIND_RS19105 () | 79777..80442 | - | 666 | WP_012382926.1 | uracil-DNA glycosylase | - |
| BIND_RS19110 () | 80439..81602 | - | 1164 | WP_050764236.1 | nucleoside triphosphate pyrophosphohydrolase family protein | - |
| BIND_RS19115 () | 81565..82203 | - | 639 | WP_012382928.1 | hypothetical protein | - |
| BIND_RS19120 () | 82203..82670 | - | 468 | WP_012382929.1 | TIR domain-containing protein | - |
| BIND_RS19125 () | 83051..84136 | + | 1086 | WP_158304410.1 | toll/interleukin-1 receptor domain-containing protein | - |
| BIND_RS19130 () | 84124..84792 | + | 669 | WP_012382931.1 | hypothetical protein | - |
| BIND_RS19135 () | 84891..86063 | - | 1173 | WP_012382932.1 | tyrosine-type recombinase/integrase | - |
| BIND_RS19140 () | 86060..86476 | - | 417 | WP_012382933.1 | type II toxin-antitoxin system VapC family toxin | - |
| BIND_RS19145 () | 86476..86718 | - | 243 | WP_012382934.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| BIND_RS19150 () | 87016..87324 | + | 309 | WP_012382935.1 | hypothetical protein | - |
| BIND_RS19155 () | 87321..88394 | + | 1074 | WP_012382936.1 | DUF1612 domain-containing protein | - |
| BIND_RS19160 () | 88840..89535 | - | 696 | WP_012382937.1 | DUF4410 domain-containing protein | - |
| BIND_RS21730 () | 89803..90072 | - | 270 | WP_012382938.1 | cysteine rich repeat-containing protein | - |
| BIND_RS19170 () | 90078..91010 | - | 933 | WP_012382939.1 | sterol desaturase family protein | - |
| BIND_RS19175 () | 91177..91905 | + | 729 | WP_041779077.1 | Transcriptional regulatory protein OmpR | VF |
| BIND_RS19180 () | 91893..93278 | + | 1386 | WP_012382941.1 | HAMP domain-containing protein | - |
| BIND_RS19185 () | 93737..93961 | + | 225 | WP_012382942.1 | hypothetical protein | - |
| BIND_RS19190 () | 94775..95515 | - | 741 | WP_012382943.1 | DUF4410 domain-containing protein | - |
| BIND_RS21525 () | 95612..95812 | + | 201 | WP_148210830.1 | hypothetical protein | - |
| BIND_RS19210 () | 98069..98908 | + | 840 | WP_162020912.1 | DUF1403 family protein | - |
| BIND_RS19215 () | 98911..99576 | + | 666 | WP_012382945.1 | SMC-Scp complex subunit ScpB | - |
| BIND_RS19220 () | 99690..100520 | + | 831 | WP_012382946.1 | hypothetical protein | - |
| BIND_RS19225 () | 100615..100851 | + | 237 | WP_148210831.1 | hypothetical protein | - |
| BIND_RS19230 () | 101224..102000 | - | 777 | WP_041779081.1 | hypothetical protein | - |
| BIND_RS19235 () | 102049..102273 | - | 225 | WP_148210832.1 | hypothetical protein | - |
| BIND_RS19240 () | 102390..102587 | - | 198 | WP_012382948.1 | ISKra4 family transposase ISRssp6 | Transposase |
| BIND_RS19245 () | 102746..104059 | + | 1314 | WP_012382949.1 | sugar ABC transporter substrate-binding protein | - |
| BIND_RS19250 () | 104190..105062 | + | 873 | WP_041779083.1 | sugar ABC transporter permease | - |
| BIND_RS19255 () | 105065..105895 | + | 831 | WP_012382951.1 | carbohydrate ABC transporter permease | - |
| BIND_RS19260 () | 105906..106904 | + | 999 | WP_012382952.1 | sn-glycerol-3-phosphate import ATP-binding protein UgpC | VF |
| BIND_RS19265 () | 106999..108459 | + | 1461 | Protein_113 | IS5 family transposase ISMpo7 | Transposase |
| BIND_RS20350 () | 108523..109280 | + | 758 | WP_085938765.1 | IS5 family transposase ISMpo7 | Transposase |
| BIND_RS21735 () | 109311..109607 | - | 297 | WP_041779084.1 | hypothetical protein | - |
| BIND_RS19280 () | 109817..110467 | + | 651 | WP_193345348.1 | sorbitol dehydrogenase family protein | - |
| BIND_RS19285 () | 110490..112127 | + | 1638 | WP_012382955.1 | GMC family oxidoreductase | - |
| BIND_RS19290 () | 112120..113487 | + | 1368 | WP_012382956.1 | cytochrome c | - |
| BIND_RS19295 () | 113582..114331 | - | 750 | WP_041779121.1 | IS6 family transposase ISRle39B | Transposase |
| BIND_RS19300 () | 114861..116858 | - | 1998 | WP_012382959.1 | transketolase | - |
| BIND_RS19305 () | 116930..117901 | - | 972 | WP_041779085.1 | transaldolase | - |
| BIND_RS19310 () | 118025..119470 | - | 1446 | WP_012382961.1 | xylulokinase | - |
| BIND_RS19315 () | 119454..120419 | - | 966 | WP_012382962.1 | AraC family transcriptional regulator | - |
| BIND_RS19320 () | 120695..121741 | - | 1047 | WP_012382964.1 | NAD(P)-dependent alcohol dehydrogenase | - |
| BIND_RS19325 () | 121900..122835 | - | 936 | WP_041779086.1 | ABC transporter substrate-binding protein | - |
| BIND_RS19335 () | 123072..123353 | + | 282 | WP_012382966.1 | ISKra4 family transposase ISRssp6 | Transposase |
| BIND_RS19340 () | 123471..124179 | - | 709 | Protein_127 | IS6 family transposase | - |
| BIND_RS19345 () | 124327..125901 | + | 1575 | WP_081433845.1 | ISL3 family transposase ISRsp8 | Transposase |
| BIND_RS21535 () | 126036..126182 | - | 147 | WP_148210839.1 | hypothetical protein | - |
| BIND_RS19355 () | 126419..126703 | - | 285 | WP_012382968.1 | hypothetical protein | - |
| BIND_RS19365 () | 126958..127434 | + | 477 | WP_012382969.1 | Hsp20 family protein | - |
| BIND_RS19370 () | 127500..127910 | + | 411 | WP_012382970.1 | hypothetical protein | - |
| BIND_RS19375 () | 128083..128786 | - | 704 | Protein_133 | IS6 family transposase ISRle39A | Transposase |
| BIND_RS20990 () | 129333..129987 | - | 655 | Protein_134 | IS5 family transposase | - |
| BIND_RS20355 () | 130105..131553 | + | 1449 | WP_012382971.1 | hemerythrin domain-containing protein | - |
| BIND_RS19400 () | 131736..132608 | - | 873 | WP_012382972.1 | transglutaminase family protein | - |
| BIND_RS20995 () | 132868..133092 | + | 225 | Protein_137 | inorganic diphosphatase | - |
| BIND_RS19410 () | 133117..133731 | + | 615 | WP_012382973.1 | hypothetical protein | VF |
| BIND_RS19415 () | 133865..134689 | - | 825 | WP_012382974.1 | hypothetical protein | - |
| BIND_RS21000 () | 135362..135748 | + | 387 | Protein_140 | ferritin-like domain-containing protein | - |
| BIND_RS21005 () | 135743..136524 | - | 782 | Protein_141 | IS5 family transposase | - |
| BIND_RS21540 () | 136582..136710 | + | 129 | Protein_142 | DUF892 family protein | - |
| BIND_RS19435 () | 136826..137332 | - | 507 | WP_012382977.1 | ferritin-like domain-containing protein | - |
| BIND_RS21010 () | 137667..138610 | + | 944 | WP_012382978.1 | IS630 family transposase | - |
| BIND_RS19450 () | 139994..140524 | + | 531 | WP_012382979.1 | DUF4142 domain-containing protein | - |
| BIND_RS19455 () | 140808..141998 | + | 1191 | WP_012382980.1 | NADH-quinone oxidoreductase subunit D | - |
| BIND_RS19460 () | 142166..145669 | - | 3504 | WP_012382981.1 | PAS domain-containing protein | - |
| BIND_RS19465 () | 145882..146865 | + | 984 | WP_012382982.1 | Protein-glutamate methylesterase/protein-glutamine glutaminase | VF |
| BIND_RS21020 () | 147789..148049 | - | 261 | WP_081433842.1 | IS5 family transposase ISMdi24 | Transposase |
| BIND_RS21025 () | 148394..148603 | - | 210 | WP_081433843.1 | IS110 family transposase ISGdi7 | Transposase |
| BIND_RS21030 () | 148510..148911 | - | 402 | WP_158304411.1 | transposase | - |
| BIND_RS19485 () | 149085..149774 | + | 690 | Protein_152 | IS110 family transposase | - |
| BIND_RS19490 () | 150469..150930 | + | 462 | WP_012382984.1 | nuclear transport factor 2 family protein | - |
| BIND_RS19495 () | 151002..151769 | - | 768 | WP_012382985.1 | iron-containing redox enzyme family protein | - |
| BIND_RS19500 () | 152120..152776 | + | 657 | WP_148210833.1 | LexA family transcriptional regulator | - |
| BIND_RS19505 () | 153004..153585 | - | 582 | WP_012382987.1 | TetR/AcrR family transcriptional regulator | - |
| BIND_RS19510 () | 154232..154642 | - | 411 | WP_012382988.1 | hypothetical protein | - |
| BIND_RS19515 () | 154690..155973 | - | 1284 | WP_012382989.1 | replication protein C | - |
| BIND_RS19520 () | 156275..156835 | - | 561 | WP_012382990.1 | thermonuclease family protein | - |
| BIND_RS19525 () | 157417..157806 | + | 390 | WP_012382991.1 | hypothetical protein | - |
| BIND_RS19530 () | 157937..159001 | + | 1065 | WP_012382992.1 | hypothetical protein | - |
| BIND_RS19535 () | 159003..159530 | + | 528 | WP_012382993.1 | hypothetical protein | - |
| BIND_RS19540 () | 159587..159898 | - | 312 | WP_012382994.1 | hypothetical protein | - |
| BIND_RS19545 () | 159946..160407 | - | 462 | WP_012382995.1 | hypothetical protein | - |
| BIND_RS19550 () | 160410..162740 | - | 2331 | WP_012382996.1 | DotA/TraY family protein | - |
| BIND_RS19555 () | 162804..164261 | - | 1458 | WP_012382997.1 | hypothetical protein | - |
| BIND_RS19560 () | 164279..165448 | - | 1170 | WP_012382998.1 | hypothetical protein | - |
| BIND_RS19565 () | 165457..166002 | - | 546 | WP_012382999.1 | hypothetical protein | - |
| BIND_RS19570 () | 166002..166460 | - | 459 | WP_012383000.1 | hypothetical protein | - |
| BIND_RS19575 () | 166527..166970 | - | 444 | WP_012383001.1 | hypothetical protein | - |
| BIND_RS20365 () | 167133..167588 | + | 456 | WP_012383002.1 | helix-turn-helix domain-containing protein | - |
| BIND_RS19585 () | 167697..168671 | + | 975 | WP_012383003.1 | hypothetical protein | - |
| BIND_RS19590 () | 168721..169350 | + | 630 | WP_012383004.1 | DotI/IcmL family type IV secretion protein | - |
| BIND_RS19595 () | 169359..170321 | + | 963 | WP_012383005.1 | hypothetical protein | VF |
| BIND_RS19600 () | 170323..171624 | + | 1302 | WP_012383006.1 | DotG/IcmE/VirB10 family protein | - |
| BIND_RS19605 () | 171680..173110 | + | 1431 | WP_012383007.1 | hypothetical protein | - |
| BIND_RS19610 () | 173120..173656 | + | 537 | WP_012383008.1 | hypothetical protein | - |
| BIND_RS19615 () | 174176..174514 | + | 339 | WP_041779135.1 | hypothetical protein | - |
| BIND_RS19620 () | 174532..175179 | + | 648 | WP_012383011.1 | hypothetical protein | - |
| BIND_RS19625 () | 175191..178247 | + | 3057 | WP_012383012.1 | hypothetical protein | VF |
| BIND_RS19630 () | 178511..178993 | + | 483 | WP_012383013.1 | DUF2726 domain-containing protein | - |
| BIND_RS19635 () | 179025..179573 | + | 549 | WP_012383014.1 | hypothetical protein | - |
| BIND_RS19640 () | 179592..179936 | - | 345 | WP_012383015.1 | HU family DNA-binding protein | - |
| BIND_RS21035 () | 180120..180524 | + | 405 | WP_012383016.1 | hypothetical protein | - |
| BIND_RS21040 () | 180485..181450 | - | 966 | WP_012383017.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|