MGE detailed information
MGE type: Prophage MGE length: 50946 bp
Accession: NC_010513 Location: 1210795..1261740 Organism: Xylella fastidiosa M12 Replicon: chromosome
Accession: NC_010513 Location: 1210795..1261740 Organism: Xylella fastidiosa M12 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XFASM12_RS05230 () | 1206912..1207697 | + | 786 | WP_010894307.1 | undecaprenyl-diphosphate phosphatase | - |
| XFASM12_RS05235 () | 1207865..1208578 | - | 714 | WP_004084858.1 | YceI family protein | - |
| XFASM12_RS05240 () | 1209037..1209996 | + | 960 | WP_004084859.1 | mitochondrial fission ELM1 family protein | - |
| XFASM12_RS12175 () | 1210032..1210312 | + | 281 | Protein_1019 | hypothetical protein | - |
| XFASM12_RS05245 () | 1210468..1210662 | - | 195 | Protein_1020 | helix-turn-helix domain-containing protein | - |
| XFASM12_RS05250 () | 1210795..1211877 | - | 1083 | WP_012337635.1 | phage late control D family protein | - |
| XFASM12_RS05255 () | 1211868..1212086 | - | 219 | WP_004085341.1 | tail protein X | - |
| XFASM12_RS05260 () | 1212083..1212565 | - | 483 | WP_012337636.1 | phage tail protein | - |
| XFASM12_RS05265 () | 1212562..1214781 | - | 2220 | WP_012337637.1 | phage tail tape measure protein | - |
| XFASM12_RS05270 () | 1214908..1215195 | - | 288 | WP_012337638.1 | phage tail assembly protein | - |
| XFASM12_RS05275 () | 1215198..1215707 | - | 510 | WP_012337639.1 | phage major tail tube protein | - |
| XFASM12_RS05280 () | 1215707..1216885 | - | 1179 | WP_012337640.1 | phage tail sheath family protein | - |
| XFASM12_RS05285 () | 1216949..1218541 | - | 1593 | WP_012337641.1 | tail fiber domain-containing protein | - |
| XFASM12_RS05290 () | 1218549..1219106 | - | 558 | WP_012337642.1 | phage tail protein I | - |
| XFASM12_RS05295 () | 1219099..1219992 | - | 894 | WP_012337643.1 | baseplate J/gp47 family protein | - |
| XFASM12_RS05300 () | 1219992..1220330 | - | 339 | WP_004088650.1 | GPW/gp25 family protein | - |
| XFASM12_RS05305 () | 1220438..1220719 | + | 282 | WP_004087027.1 | XRE family transcriptional regulator | - |
| XFASM12_RS05310 () | 1220731..1221030 | + | 300 | WP_004087025.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| XFASM12_RS05315 () | 1221087..1221368 | + | 282 | WP_004085174.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| XFASM12_RS05320 () | 1221379..1221654 | + | 276 | WP_012337645.1 | HigA family addiction module antidote protein | Antitoxin Detail |
| XFASM12_RS05325 () | 1221659..1222246 | - | 588 | WP_012337646.1 | phage baseplate assembly protein V | - |
| XFASM12_RS05330 () | 1222243..1222785 | - | 543 | WP_012337647.1 | hypothetical protein | - |
| XFASM12_RS05335 () | 1222761..1223282 | - | 522 | WP_012337648.1 | hypothetical protein | - |
| XFASM12_RS05340 () | 1223279..1223602 | - | 324 | WP_012337649.1 | hypothetical protein | - |
| XFASM12_RS05345 () | 1223602..1223862 | - | 261 | WP_012337650.1 | hypothetical protein | - |
| XFASM12_RS05350 () | 1223880..1225754 | - | 1875 | WP_012337651.1 | phage major capsid protein | - |
| XFASM12_RS05355 () | 1225751..1227337 | - | 1587 | WP_012337652.1 | phage portal protein | - |
| XFASM12_RS05360 () | 1227334..1227882 | - | 549 | WP_012337653.1 | hypothetical protein | - |
| XFASM12_RS05365 () | 1227886..1229838 | - | 1953 | WP_012337654.1 | phage terminase large subunit family protein | - |
| XFASM12_RS05370 () | 1229831..1230406 | - | 576 | WP_012337655.1 | terminase small subunit | - |
| XFASM12_RS05375 () | 1230537..1230761 | - | 225 | WP_012337656.1 | hypothetical protein | - |
| XFASM12_RS05380 () | 1230763..1231224 | - | 462 | WP_012337657.1 | hypothetical protein | - |
| XFASM12_RS05385 () | 1231214..1231543 | - | 330 | WP_012337658.1 | phage holin family protein | - |
| XFASM12_RS05390 () | 1231536..1232036 | - | 501 | WP_012337849.1 | lysozyme | - |
| XFASM12_RS05395 () | 1232003..1232620 | - | 618 | WP_012337850.1 | hypothetical protein | - |
| XFASM12_RS05400 () | 1232654..1232851 | - | 198 | WP_021358648.1 | hypothetical protein | - |
| XFASM12_RS05405 () | 1233318..1235846 | - | 2529 | WP_012337851.1 | primase | - |
| XFASM12_RS05410 () | 1235983..1236564 | - | 582 | WP_012337852.1 | Bro-N domain-containing protein | - |
| XFASM12_RS05415 () | 1236824..1237207 | - | 384 | WP_012337854.1 | hypothetical protein | - |
| XFASM12_RS05420 () | 1237295..1237624 | - | 330 | WP_021358651.1 | hypothetical protein | - |
| XFASM12_RS05425 () | 1237614..1237859 | - | 246 | WP_012337855.1 | hypothetical protein | - |
| XFASM12_RS05430 () | 1237858..1238637 | + | 780 | WP_021358652.1 | helix-turn-helix transcriptional regulator | - |
| XFASM12_RS05435 () | 1238688..1239299 | - | 612 | WP_004087040.1 | Fic/DOC family protein | Toxin Detail |
| XFASM12_RS05440 () | 1239296..1239484 | - | 189 | WP_004087046.1 | antitoxin VbhA family protein | Antitoxin Detail |
| XFASM12_RS05445 () | 1239865..1240269 | + | 405 | WP_012337857.1 | hypothetical protein | - |
| XFASM12_RS05450 () | 1240266..1240727 | + | 462 | WP_012337858.1 | DUF1566 domain-containing protein | - |
| XFASM12_RS05455 () | 1240724..1241131 | + | 408 | WP_012337859.1 | hypothetical protein | - |
| XFASM12_RS05460 () | 1241128..1241319 | + | 192 | WP_004086069.1 | hypothetical protein | - |
| XFASM12_RS05465 () | 1241351..1241920 | - | 570 | WP_012337860.1 | DEAD/DEAH box helicase | - |
| XFASM12_RS05470 () | 1242005..1242409 | + | 405 | WP_004085029.1 | hypothetical protein | - |
| XFASM12_RS05475 () | 1242411..1242689 | - | 279 | WP_012337663.1 | VRR-NUC domain-containing protein | - |
| XFASM12_RS05480 () | 1242686..1244866 | - | 2181 | WP_012337861.1 | DNA polymerase | - |
| XFASM12_RS05485 () | 1244868..1246034 | - | 1167 | WP_031345946.1 | Bro-N domain-containing protein | - |
| XFASM12_RS05490 () | 1246121..1246687 | - | 567 | WP_012337863.1 | DUF2815 family protein | - |
| XFASM12_RS05495 () | 1246687..1247964 | - | 1278 | WP_012337864.1 | DUF2800 domain-containing protein | - |
| XFASM12_RS05500 () | 1247961..1248458 | - | 498 | WP_012337865.1 | hypothetical protein | - |
| XFASM12_RS05505 () | 1248448..1248642 | - | 195 | WP_004086187.1 | hypothetical protein | - |
| XFASM12_RS05510 () | 1248831..1249475 | + | 645 | Protein_1073 | DEAD/DEAH box helicase | - |
| XFASM12_RS05515 () | 1249703..1249948 | + | 246 | WP_012337666.1 | DUF4224 domain-containing protein | - |
| XFASM12_RS05520 () | 1249948..1250967 | + | 1020 | WP_012337868.1 | Tyrosine recombinase XerC ; Integrase | Integrase |
| XFASM12_RS05525 () | 1251059..1251700 | + | 642 | Protein_1076 | DUF2145 domain-containing protein | - |
| XFASM12_RS05530 () | 1251697..1252251 | + | 555 | WP_012337870.1 | hypothetical protein | - |
| XFASM12_RS05535 () | 1252690..1253895 | + | 1206 | WP_038231125.1 | Enoyl-[acyl-carrier-protein] reductase [NADH] | VF |
| XFASM12_RS05540 () | 1254095..1254559 | + | 465 | WP_004084863.1 | thioredoxin family protein | - |
| XFASM12_RS05545 () | 1254749..1256407 | - | 1659 | WP_004084864.1 | ubiquinone biosynthesis regulatory protein kinase UbiB | - |
| XFASM12_RS05550 () | 1256404..1257051 | - | 648 | WP_004084865.1 | SCP2 domain-containing protein | - |
| XFASM12_RS05555 () | 1257200..1258051 | + | 852 | WP_004084866.1 | formyltetrahydrofolate deformylase | - |
| XFASM12_RS05560 () | 1258370..1259698 | + | 1329 | WP_012337871.1 | GTP-binding protein | - |
| XFASM12_RS05565 () | 1259863..1260525 | + | 663 | WP_038211368.1 | hypothetical protein | VF |
| XFASM12_RS05570 () | 1260568..1261740 | + | 1173 | WP_004084869.1 | cell division protein ZapE | - |
| XFASM12_RS05575 () | 1261916..1262347 | + | 432 | WP_004084870.1 | organic hydroperoxide resistance protein | - |
| XFASM12_RS05580 () | 1262597..1263595 | + | 999 | WP_004084871.1 | NAD-dependent epimerase/dehydratase family protein | - |
| XFASM12_RS05585 () | 1263970..1266153 | + | 2184 | WP_004084872.1 | carboxy terminal-processing peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|