MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 124030 bp
Accession: NC_010480 Location: 1..124030 Organism: Synechococcus sp. PCC 7002 Replicon: plasmid pAQ6
Accession: NC_010480 Location: 1..124030 Organism: Synechococcus sp. PCC 7002 Replicon: plasmid pAQ6
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SYNPCC7002_RS14680 () | 1..639 | + | 639 | WP_012308546.1 | ParA family protein | - |
| SYNPCC7002_RS14685 () | 632..1531 | + | 900 | WP_012308547.1 | ParB/RepB/Spo0J family partition protein | - |
| SYNPCC7002_RS14690 () | 1786..3441 | - | 1656 | WP_012308548.1 | AIPR family protein | - |
| SYNPCC7002_RS14695 () | 4037..4468 | + | 432 | WP_012308549.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| SYNPCC7002_RS14700 () | 4471..4794 | + | 324 | WP_012308550.1 | toxin-antitoxin system HicB family antitoxin | - |
| SYNPCC7002_RS14705 () | 4808..5257 | + | 450 | WP_012308551.1 | ATP-binding protein | - |
| SYNPCC7002_RS14710 () | 5559..8228 | + | 2670 | WP_012308552.1 | PD-(D/E)XK nuclease family protein | - |
| SYNPCC7002_RS14715 () | 8228..11455 | + | 3228 | WP_012308553.1 | UvrD-helicase domain-containing protein | - |
| SYNPCC7002_RS14720 () | 11476..11820 | - | 345 | WP_012308554.1 | type II toxin-antitoxin system PemK/MazF family toxin | - |
| SYNPCC7002_RS14725 () | 11824..12075 | - | 252 | WP_012308555.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | - |
| SYNPCC7002_RS16815 () | 12167..12313 | - | 147 | WP_012308556.1 | hypothetical protein | - |
| SYNPCC7002_RS14730 () | 12480..12719 | - | 240 | WP_012308557.1 | type II toxin-antitoxin system HicA family toxin | - |
| SYNPCC7002_RS14735 () | 12716..12925 | - | 210 | WP_012308558.1 | hypothetical protein | - |
| SYNPCC7002_RS14740 () | 13227..14627 | - | 1401 | WP_012305518.1 | ISKra4 family transposase ISSysp7 | Transposase |
| SYNPCC7002_RS16265 () | 14632..15276 | - | 645 | WP_012305517.1 | plasmid pRiA4b ORF-3 family protein | - |
| SYNPCC7002_RS14750 () | 15415..15975 | + | 561 | WP_012305516.1 | Tn3 family transposase TnpR_ISPa38 | Transposase |
| SYNPCC7002_RS17020 () | 16122..16295 | + | 174 | WP_156785484.1 | hypothetical protein | - |
| SYNPCC7002_RS14755 () | 16276..19476 | + | 3201 | WP_012308559.1 | ATP-binding protein | - |
| SYNPCC7002_RS14760 () | 19638..20066 | + | 429 | WP_012308560.1 | hypothetical protein | - |
| SYNPCC7002_RS14765 () | 20087..20434 | + | 348 | WP_012308561.1 | hypothetical protein | - |
| SYNPCC7002_RS14770 () | 20485..20862 | + | 378 | WP_041444088.1 | PIN domain-containing protein | - |
| SYNPCC7002_RS14775 () | 21037..21402 | + | 366 | WP_041444102.1 | DUF559 domain-containing protein | - |
| SYNPCC7002_RS14780 () | 21685..24849 | + | 3165 | WP_156785485.1 | DUF1156 domain-containing protein | - |
| SYNPCC7002_RS14785 () | 24955..25269 | + | 315 | WP_012308565.1 | type II toxin-antitoxin system HigB family toxin | - |
| SYNPCC7002_RS14790 () | 25282..25668 | + | 387 | WP_012308566.1 | helix-turn-helix domain-containing protein | - |
| SYNPCC7002_RS14795 () | 25703..26128 | + | 426 | WP_012308567.1 | XisH family protein | - |
| SYNPCC7002_RS14800 () | 26116..26451 | + | 336 | WP_012308568.1 | XisI protein | - |
| SYNPCC7002_RS14805 () | 26507..26758 | + | 252 | WP_012308569.1 | hypothetical protein | - |
| SYNPCC7002_RS14810 () | 26745..27167 | + | 423 | WP_012308570.1 | PIN domain-containing protein | - |
| SYNPCC7002_RS14815 () | 27168..27563 | - | 396 | WP_012308571.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| SYNPCC7002_RS14820 () | 27564..27803 | - | 240 | WP_012308572.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| SYNPCC7002_RS14825 () | 27841..31176 | + | 3336 | WP_012308573.1 | DEAD/DEAH box helicase family protein | - |
| SYNPCC7002_RS14830 () | 31342..31797 | + | 456 | WP_012308574.1 | hypothetical protein | - |
| SYNPCC7002_RS14835 () | 31909..32721 | - | 813 | WP_143589475.1 | hypothetical protein | - |
| SYNPCC7002_RS14840 () | 32744..33412 | - | 669 | WP_012308576.1 | hypothetical protein | - |
| SYNPCC7002_RS14845 () | 33430..35127 | - | 1698 | WP_012308577.1 | hypothetical protein | - |
| SYNPCC7002_RS14850 () | 35204..35611 | - | 408 | WP_012308578.1 | hypothetical protein | - |
| SYNPCC7002_RS14855 () | 35841..37016 | - | 1176 | WP_012308579.1 | pentapeptide repeat-containing protein | - |
| SYNPCC7002_RS14860 () | 36997..37896 | - | 900 | WP_012308580.1 | hypothetical protein | - |
| SYNPCC7002_RS14865 () | 37886..39022 | - | 1137 | WP_200807261.1 | hypothetical protein | - |
| SYNPCC7002_RS14870 () | 39162..39776 | - | 615 | WP_012308582.1 | alpha-ketoglutarate-dependent dioxygenase AlkB | - |
| SYNPCC7002_RS14875 () | 39808..40686 | - | 879 | WP_012308583.1 | class I SAM-dependent methyltransferase | - |
| SYNPCC7002_RS14880 () | 40769..42838 | - | 2070 | WP_041444105.1 | WYL domain-containing protein | - |
| SYNPCC7002_RS14885 () | 42898..44364 | - | 1467 | WP_012308585.1 | tetratricopeptide repeat protein | - |
| SYNPCC7002_RS14890 () | 44557..46503 | - | 1947 | WP_012308586.1 | CRISPR-associated protein Cmr6 | - |
| SYNPCC7002_RS14895 () | 46523..46918 | - | 396 | WP_012308587.1 | hypothetical protein | - |
| SYNPCC7002_RS14900 () | 46968..47765 | - | 798 | WP_012308588.1 | type III-B CRISPR module RAMP protein Cmr4 | - |
| SYNPCC7002_RS14905 () | 47828..48934 | - | 1107 | WP_012308589.1 | hypothetical protein | - |
| SYNPCC7002_RS14910 () | 48947..51898 | - | 2952 | WP_012308590.1 | type III-B CRISPR-associated protein Cas10/Cmr2 | - |
| SYNPCC7002_RS14915 () | 52195..52533 | - | 339 | WP_012308591.1 | hypothetical protein | - |
| SYNPCC7002_RS14920 () | 52530..52754 | - | 225 | WP_012308592.1 | hypothetical protein | - |
| SYNPCC7002_RS14925 () | 52757..53458 | - | 702 | WP_012308593.1 | hypothetical protein | - |
| SYNPCC7002_RS16570 () | 53531..53866 | - | 336 | WP_156785486.1 | hypothetical protein | - |
| SYNPCC7002_RS14940 () | 54224..54454 | - | 231 | WP_012308595.1 | hypothetical protein | - |
| SYNPCC7002_RS14945 () | 61478..61759 | - | 282 | WP_041444093.1 | CRISPR-associated endonuclease Cas2 | - |
| SYNPCC7002_RS14950 () | 61756..62742 | - | 987 | WP_012308596.1 | CRISPR-associated endonuclease Cas1 | - |
| SYNPCC7002_RS14955 () | 62739..63035 | - | 297 | WP_012308597.1 | hypothetical protein | - |
| SYNPCC7002_RS14960 () | 63266..63463 | - | 198 | WP_041444094.1 | hypothetical protein | - |
| SYNPCC7002_RS14965 () | 63783..65009 | + | 1227 | WP_012308598.1 | WYL domain-containing protein | - |
| SYNPCC7002_RS14970 () | 65265..66446 | - | 1182 | WP_012308599.1 | Secreted effector protein PipB2 | VF |
| SYNPCC7002_RS14975 () | 66451..67140 | - | 690 | WP_012308600.1 | hypothetical protein | - |
| SYNPCC7002_RS14980 () | 67166..68317 | - | 1152 | WP_012308601.1 | hypothetical protein | - |
| SYNPCC7002_RS16825 () | 68501..68674 | - | 174 | WP_156785487.1 | hypothetical protein | - |
| SYNPCC7002_RS14985 () | 68740..69135 | - | 396 | WP_012308602.1 | hypothetical protein | - |
| SYNPCC7002_RS14990 () | 69171..69761 | - | 591 | WP_049761775.1 | hypothetical protein | - |
| SYNPCC7002_RS14995 () | 69872..70324 | - | 453 | WP_012308604.1 | hypothetical protein | - |
| SYNPCC7002_RS15000 () | 70492..70995 | - | 504 | WP_012308605.1 | GNAT family N-acetyltransferase | - |
| SYNPCC7002_RS15005 () | 70985..71281 | - | 297 | WP_012308606.1 | DUF1778 domain-containing protein | - |
| SYNPCC7002_RS15010 () | 71371..75507 | - | 4137 | WP_012308607.1 | CHAT domain-containing protein | - |
| SYNPCC7002_RS15015 () | 75691..77250 | - | 1560 | WP_012308608.1 | ATP-binding protein | - |
| SYNPCC7002_RS15020 () | 77333..77842 | - | 510 | WP_012308609.1 | DNA integrity scanning protein DisA nucleotide-binding domain protein | - |
| SYNPCC7002_RS15025 () | 78085..78900 | + | 816 | WP_012308610.1 | hypothetical protein | - |
| SYNPCC7002_RS15030 () | 79106..79834 | + | 729 | WP_012308611.1 | sigma-70 family RNA polymerase sigma factor | - |
| SYNPCC7002_RS15035 () | 79848..80993 | + | 1146 | WP_012308612.1 | DUF1822 family protein | - |
| SYNPCC7002_RS15040 () | 81051..81392 | + | 342 | WP_012308613.1 | hypothetical protein | - |
| SYNPCC7002_RS15045 () | 81459..84779 | + | 3321 | WP_012308614.1 | CHAT domain-containing protein | - |
| SYNPCC7002_RS15050 () | 85109..86329 | + | 1221 | WP_012308615.1 | hypothetical protein | - |
| SYNPCC7002_RS15055 () | 86420..86644 | + | 225 | WP_143589474.1 | histidine kinase | - |
| SYNPCC7002_RS15060 () | 86641..87033 | + | 393 | WP_012308617.1 | type II toxin-antitoxin system death-on-curing family toxin | - |
| SYNPCC7002_RS15065 () | 87233..87754 | + | 522 | WP_012308618.1 | hypothetical protein | - |
| SYNPCC7002_RS15070 () | 87760..88101 | + | 342 | WP_041444096.1 | hypothetical protein | - |
| SYNPCC7002_RS15075 () | 88101..90866 | + | 2766 | WP_012308619.1 | hypothetical protein | - |
| SYNPCC7002_RS15080 () | 90869..91585 | + | 717 | WP_012308620.1 | hypothetical protein | - |
| SYNPCC7002_RS15085 () | 91787..92179 | - | 393 | WP_012308621.1 | type II toxin-antitoxin system VapC family toxin | - |
| SYNPCC7002_RS15090 () | 92176..92403 | - | 228 | WP_012308622.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | - |
| SYNPCC7002_RS16830 () | 92496..92654 | - | 159 | WP_156785488.1 | hypothetical protein | - |
| SYNPCC7002_RS15100 () | 92745..93254 | - | 510 | WP_012308623.1 | hypothetical protein | - |
| SYNPCC7002_RS16575 () | 93312..93623 | - | 312 | WP_083764504.1 | hypothetical protein | - |
| SYNPCC7002_RS15105 () | 93633..94094 | + | 462 | WP_049761787.1 | cytochrome P450 | - |
| SYNPCC7002_RS15110 () | 94395..94775 | - | 381 | WP_012308625.1 | HEPN domain-containing protein | - |
| SYNPCC7002_RS15115 () | 94772..95095 | - | 324 | WP_012308626.1 | nucleotidyltransferase domain-containing protein | - |
| SYNPCC7002_RS15120 () | 95397..95711 | - | 315 | WP_012308627.1 | hypothetical protein | - |
| SYNPCC7002_RS15125 () | 95717..101701 | - | 5985 | WP_049761781.1 | strawberry notch C-terminal domain-containing protein | - |
| SYNPCC7002_RS15130 () | 101758..102105 | - | 348 | WP_041444097.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SYNPCC7002_RS15135 () | 102095..102340 | - | 246 | WP_012308630.1 | hypothetical protein | Antitoxin Detail |
| SYNPCC7002_RS15140 () | 102358..105897 | - | 3540 | WP_012308631.1 | N-6 DNA methylase | - |
| SYNPCC7002_RS15145 () | 106015..106800 | + | 786 | WP_012308632.1 | hypothetical protein | - |
| SYNPCC7002_RS15150 () | 106812..107984 | + | 1173 | WP_143589479.1 | hypothetical protein | - |
| SYNPCC7002_RS15155 () | 107981..108895 | + | 915 | WP_012308635.1 | hypothetical protein | - |
| SYNPCC7002_RS15160 () | 108870..111749 | - | 2880 | WP_012308634.1 | DEAD/DEAH box helicase family protein | - |
| SYNPCC7002_RS15165 () | 111777..112040 | - | 264 | WP_012308636.1 | hypothetical protein | - |
| SYNPCC7002_RS15170 () | 112110..112310 | + | 201 | WP_012308637.1 | hypothetical protein | - |
| SYNPCC7002_RS15175 () | 112427..112822 | + | 396 | WP_012308638.1 | hypothetical protein | - |
| SYNPCC7002_RS15180 () | 112859..113959 | + | 1101 | WP_012308639.1 | hypothetical protein | - |
| SYNPCC7002_RS16835 () | 114010..114153 | + | 144 | WP_156785489.1 | hypothetical protein | - |
| SYNPCC7002_RS15185 () | 114228..114683 | + | 456 | WP_012308640.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| SYNPCC7002_RS15190 () | 114655..114879 | + | 225 | WP_012308641.1 | toxin-antitoxin system HicB family antitoxin | - |
| SYNPCC7002_RS15195 () | 115076..116224 | - | 1149 | WP_012308642.1 | hypothetical protein | VF |
| SYNPCC7002_RS15200 () | 116771..117025 | + | 255 | WP_012308643.1 | hypothetical protein | - |
| SYNPCC7002_RS15205 () | 117022..117444 | + | 423 | WP_012308644.1 | PIN domain-containing protein | - |
| SYNPCC7002_RS15210 () | 117546..121295 | - | 3750 | WP_012308645.1 | Multifunctional conjugation protein TraI | Relaxase |
| SYNPCC7002_RS15215 () | 121767..122753 | + | 987 | WP_012308647.1 | ParM/StbA family protein | - |
| SYNPCC7002_RS16580 () | 122765..123112 | + | 348 | WP_012308648.1 | hypothetical protein | - |
| SYNPCC7002_RS15220 () | 123124..123630 | + | 507 | WP_012308649.1 | hypothetical protein | - |
| SYNPCC7002_RS16585 () | 123630..123839 | + | 210 | WP_012308650.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|