MGE detailed information
MGE type: Prophage MGE length: 40171 bp
Accession: NC_010079 Location: 1922967..1963137 Organism: Staphylococcus aureus subsp. aureus USA300 TCH1516 Replicon: chromosome
Accession: NC_010079 Location: 1922967..1963137 Organism: Staphylococcus aureus subsp. aureus USA300 TCH1516 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| USA300HOU_RS09510 () | 1918780..1919526 | - | 747 | WP_002868962.1 | S9 family peptidase | - |
| USA300HOU_RS09515 () | 1919531..1920004 | - | 474 | WP_000672014.1 | nucleoside triphosphatase YtkD | - |
| USA300HOU_RS09520 () | 1920070..1920327 | + | 258 | WP_000718107.1 | membrane protein insertion efficiency factor YidD | - |
| USA300HOU_RS09525 () | 1920324..1921325 | - | 1002 | WP_000778523.1 | o-succinylbenzoate synthase | - |
| USA300HOU_RS09530 () | 1921330..1922808 | - | 1479 | WP_000348360.1 | o-succinylbenzoate--CoA ligase | - |
| USA300HOU_RS09535 () | 1922967..1923422 | - | 456 | WP_011443643.1 | DUF4909 domain-containing protein | - |
| USA300HOU_RS09540 () | 1923725..1924375 | + | 651 | WP_001795535.1 | excalibur calcium-binding domain-containing protein | - |
| USA300HOU_RS09545 () | 1924456..1925451 | + | 996 | WP_000070653.1 | DUF4352 domain-containing protein | - |
| USA300HOU_RS09550 () | 1925527..1926153 | + | 627 | Protein_1843 | hypothetical protein | - |
| USA300HOU_RS09555 () | 1926194..1926538 | + | 345 | WP_000627551.1 | DUF3969 family protein | - |
| USA300HOU_RS09560 () | 1926636..1927187 | + | 552 | WP_000414205.1 | hypothetical protein | - |
| USA300HOU_RS09565 () | 1927405..1928046 | - | 642 | WP_000494956.1 | ImmA/IrrE family metallo-endopeptidase | - |
| USA300HOU_RS09570 () | 1928160..1928345 | - | 186 | WP_000809857.1 | hypothetical protein | - |
| USA300HOU_RS09575 () | 1928347..1928523 | - | 177 | WP_000375476.1 | hypothetical protein | - |
| USA300HOU_RS09580 () | 1928534..1928917 | - | 384 | WP_000070811.1 | hypothetical protein | - |
| USA300HOU_RS09590 () | 1929521..1929664 | - | 144 | WP_001549059.1 | IS3 family transposase IS655 | Transposase |
| USA300HOU_RS15780 () | 1929867..1929962 | + | 96 | WP_001801861.1 | type I toxin-antitoxin system Fst family toxin PepA1 | Toxin Detail |
| - () | 1929990..1930049 | - | 60 | - | - | Antitoxin Detail |
| USA300HOU_RS09595 () | 1930085..1930186 | + | 102 | WP_001791893.1 | hypothetical protein | - |
| USA300HOU_RS15375 () | 1930164..1930340 | - | 177 | Protein_1853 | transposase | - |
| USA300HOU_RS09600 () | 1930534..1930911 | - | 378 | WP_001037045.1 | DUF1433 domain-containing protein | - |
| USA300HOU_RS09605 () | 1931432..1935543 | - | 4112 | Protein_1855 | ATP-binding protein | - |
| USA300HOU_RS09615 () | 1936393..1937592 | - | 1200 | WP_000072576.1 | restriction endonuclease subunit S | - |
| USA300HOU_RS09620 () | 1937585..1939141 | - | 1557 | WP_000028659.1 | type I restriction-modification system subunit M | - |
| USA300HOU_RS09625 () | 1939305..1939439 | - | 135 | WP_001791797.1 | hypothetical protein | - |
| USA300HOU_RS09630 () | 1939504..1940223 | - | 720 | WP_001038688.1 | Serine protease SplF | VF |
| USA300HOU_RS09635 () | 1940374..1941090 | - | 717 | WP_001038759.1 | Serine protease SplE | VF |
| USA300HOU_RS15785 () | 1941192..1941299 | + | 108 | WP_011447030.1 | hypothetical protein | - |
| USA300HOU_RS09640 () | 1941248..1941967 | - | 720 | WP_001038704.1 | Serine protease SplD | VF |
| USA300HOU_RS09645 () | 1942088..1942807 | - | 720 | WP_001038867.1 | Serine protease SplC | VF |
| USA300HOU_RS09650 () | 1942865..1943587 | - | 723 | WP_001039447.1 | Serine protease SplB | VF |
| USA300HOU_RS09655 () | 1943712..1944419 | - | 708 | WP_001039435.1 | Serine protease SplA | VF |
| USA300HOU_RS09665 () | 1945383..1945949 | + | 567 | WP_001092763.1 | DUF4888 domain-containing protein | - |
| USA300HOU_RS15380 () | 1946423..1947121 | - | 699 | WP_000586140.1 | hypothetical protein | - |
| USA300HOU_RS09675 () | 1947118..1947879 | - | 762 | WP_000581552.1 | lantibiotic immunity ABC transporter MutE/EpiE family permease subunit | - |
| USA300HOU_RS09680 () | 1947876..1948568 | - | 693 | WP_001096791.1 | Bacitracin transport ATP-binding protein BcrA | VF |
| USA300HOU_RS09685 () | 1948591..1949964 | - | 1374 | WP_000691541.1 | S8 family serine peptidase | - |
| USA300HOU_RS09690 () | 1949974..1950492 | - | 519 | WP_000504439.1 | flavoprotein | - |
| USA300HOU_RS09695 () | 1950508..1951752 | - | 1245 | WP_000566596.1 | lanthionine synthetase C family protein | - |
| USA300HOU_RS09700 () | 1951745..1954738 | - | 2994 | WP_001092605.1 | lantibiotic dehydratase | - |
| USA300HOU_RS09705 () | 1954803..1954946 | - | 144 | WP_000416756.1 | gallidermin/nisin family lantibiotic | - |
| USA300HOU_RS09710 () | 1955683..1955826 | - | 144 | WP_000416759.1 | gallidermin/nisin family lantibiotic | - |
| USA300HOU_RS09715 () | 1956068..1957051 | - | 984 | WP_000782464.1 | Leucotoxin LukDv | VF |
| USA300HOU_RS09720 () | 1957053..1957988 | - | 936 | WP_000473596.1 | Leucotoxin LukEv | VF |
| USA300HOU_RS09725 () | 1958787..1959326 | + | 540 | WP_000226886.1 | hypothetical protein | - |
| USA300HOU_RS09730 () | 1959339..1960126 | + | 788 | Protein_1879 | DUF1828 domain-containing protein | - |
| USA300HOU_RS15390 () | 1960587..1960795 | + | 209 | Protein_1880 | hypothetical protein | - |
| USA300HOU_RS09775 () | 1962583..1963137 | - | 555 | WP_000132890.1 | alpha/beta hydrolase | - |
| USA300HOU_RS09785 () | 1963460..1964860 | - | 1401 | WP_000167538.1 | protoporphyrinogen oxidase | - |
| USA300HOU_RS09790 () | 1964884..1965807 | - | 924 | WP_000162881.1 | ferrochelatase | - |
| USA300HOU_RS09795 () | 1965865..1966902 | - | 1038 | WP_000233527.1 | uroporphyrinogen decarboxylase | - |
| USA300HOU_RS09800 () | 1966892..1967002 | - | 111 | WP_001790154.1 | hypothetical protein | - |
| USA300HOU_RS09805 () | 1967165..1967668 | + | 504 | WP_000737976.1 | signal transduction protein TRAP | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Staphylococcus aureus subsp. aureus str. Newman | Prophage | TA10024 | NC_009641 | 1882747..1922929 | 0 |