MGE detailed information
MGE type: IScluster/Tn MGE length: 16145 bp
Accession: NC_009837 Location: 78096..94240 Organism: Escherichia coli APEC O1 Replicon: plasmid pAPEC-O1-ColBM
Accession: NC_009837 Location: 78096..94240 Organism: Escherichia coli APEC O1 Replicon: plasmid pAPEC-O1-ColBM
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| APECO1_RS26115 () | 73283..74110 | - | 828 | WP_000154003.1 | HAD-IIB family hydrolase | - |
| APECO1_RS26120 () | 74094..75332 | - | 1239 | WP_012006540.1 | DegT/DnrJ/EryC1/StrS family aminotransferase | - |
| APECO1_RS26125 () | 75872..77005 | + | 1134 | WP_000545983.1 | DUF3800 domain-containing protein | - |
| APECO1_RS26130 () | 77025..77309 | + | 285 | WP_000642771.1 | hypothetical protein | - |
| APECO1_RS26135 () | 77306..77503 | - | 198 | WP_000215657.1 | hypothetical protein | - |
| APECO1_RS26140 () | 78087..78476 | + | 390 | WP_001282151.1 | IS66 family transposase ISEc8 | Transposase |
| APECO1_RS26145 () | 78473..78820 | + | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| APECO1_RS26150 () | 78870..80408 | + | 1539 | WP_000997962.1 | IS66 family transposase ISEc8 | Transposase |
| APECO1_RS26160 () | 80434..81665 | + | 1232 | WP_094284489.1 | IS3 family transposase IS2 | Transposase |
| APECO1_RS26165 () | 81930..85427 | + | 3498 | WP_001038844.1 | Outer membrane protein IcsA autotransporter | VF |
| APECO1_RS26175 () | 85574..86767 | + | 1194 | Protein_92 | IS3 family transposase IS629 | Transposase |
| APECO1_RS26180 () | 86860..88047 | - | 1188 | WP_160348040.1 | MFS transporter | - |
| APECO1_RS26185 () | 88104..88865 | - | 762 | WP_000020503.1 | Fe(3+) dicitrate transport ATP-binding protein FecE | VF |
| APECO1_RS26190 () | 88865..89902 | - | 1038 | WP_000110580.1 | Hemin transport system permease protein HmuU | VF |
| APECO1_RS26195 () | 89902..90900 | - | 999 | WP_000756335.1 | ABC transporter substrate-binding protein | - |
| APECO1_RS28010 () | 91050..91208 | - | 159 | Protein_97 | integrase core domain-containing protein | - |
| APECO1_RS26200 () | 91255..91845 | - | 591 | WP_000086535.1 | Tn3 family transposase TnpR_ISSba14 | Transposase |
| APECO1_RS26205 () | 92346..92630 | + | 285 | WP_012006537.1 | ribbon-helix-helix domain-containing protein | Antitoxin Detail |
| APECO1_RS26210 () | 92630..92905 | + | 276 | WP_000421266.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| APECO1_RS26215 () | 93011..93250 | + | 240 | WP_001105068.1 | hypothetical protein | - |
| APECO1_RS26230 () | 94942..97080 | + | 2139 | WP_000350635.1 | AAA family ATPase | - |
| APECO1_RS26235 () | 97242..97658 | - | 417 | WP_001044768.1 | type II toxin-antitoxin system VapC family toxin | Toxin Detail |
| APECO1_RS26240 () | 97655..97885 | - | 231 | WP_001261287.1 | AbrB/MazE/SpoVT family DNA-binding domain-containing protein | Antitoxin Detail |
| APECO1_RS26245 () | 98447..98797 | + | 351 | WP_000493379.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|