MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 74224 bp
Accession: NC_009790 Location: 1..74224 Organism: Escherichia coli E24377A Replicon: plasmid pETEC_74
Accession: NC_009790 Location: 1..74224 Organism: Escherichia coli E24377A Replicon: plasmid pETEC_74
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ECE24377A_RS01170 () | 990..1169 | + | 180 | WP_032231585.1 | hypothetical protein | - |
| ECE24377A_RS27115 () | 1319..1906 | - | 588 | Protein_2 | IS91 family transposase ISSbo1 | Transposase |
| ECE24377A_RS01180 () | 2164..3345 | + | 1182 | WP_001467544.1 | DUF3800 domain-containing protein | - |
| ECE24377A_RS01185 () | 3514..4191 | + | 678 | WP_001704819.1 | IS66 family transposase ISCro1 | Transposase |
| ECE24377A_RS01190 () | 4191..4538 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| ECE24377A_RS01195 () | 4558..6129 | + | 1572 | WP_000381401.1 | IS66 family transposase ISCro1 | Transposase |
| ECE24377A_RS29100 () | 6209..6822 | + | 614 | Protein_7 | IS3 family transposase IS2 | Transposase |
| ECE24377A_RS29825 () | 7009..7152 | - | 144 | Protein_8 | IS91 family transposase | - |
| ECE24377A_RS01210 () | 7137..7502 | - | 366 | WP_000124102.1 | hypothetical protein | - |
| ECE24377A_RS01215 () | 7779..8615 | - | 837 | Protein_10 | IS91 family transposase IS91 | Transposase |
| ECE24377A_RS29105 () | 8614..9912 | + | 1299 | Protein_11 | hypothetical protein | - |
| ECE24377A_RS01225 () | 9967..10401 | + | 435 | WP_000845924.1 | conjugation system SOS inhibitor PsiB | - |
| ECE24377A_RS01230 () | 10398..11117 | + | 720 | WP_001276223.1 | plasmid SOS inhibition protein A | - |
| - () | 11129..11323 | + | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 11129..11323 | + | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 11129..11323 | + | 195 | NuclAT_0 | - | Antitoxin Detail |
| - () | 11129..11323 | + | 195 | NuclAT_0 | - | Antitoxin Detail |
| ECE24377A_RS01235 () | 11388..11546 | + | 159 | WP_001312861.1 | type I toxin-antitoxin system Hok family toxin | Toxin Detail |
| ECE24377A_RS29830 () | 11971..12710 | + | 740 | Protein_15 | IS3 family transposase IS1203 | Transposase |
| ECE24377A_RS01255 () | 13383..14891 | + | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| ECE24377A_RS01260 () | 14981..15454 | + | 474 | Protein_17 | IS3 family transposase IS629 | Transposase |
| ECE24377A_RS01265 () | 15493..15759 | - | 267 | Protein_18 | IS110 family transposase ISShdy1 | Transposase |
| ECE24377A_RS01270 () | 15818..16612 | - | 795 | WP_000544809.1 | IS21 family transposase ISEc62 | Transposase |
| ECE24377A_RS01275 () | 16612..17784 | - | 1173 | WP_000952425.1 | IS21 family transposase ISEc62 | Transposase |
| ECE24377A_RS01280 () | 17886..18179 | - | 294 | Protein_21 | IS110 family transposase ISShdy1 | Transposase |
| ECE24377A_RS29110 () | 18277..18519 | - | 243 | WP_032178760.1 | hypothetical protein | - |
| ECE24377A_RS01290 () | 18516..19418 | - | 903 | WP_001365320.1 | DUF1281 domain-containing protein | - |
| ECE24377A_RS01295 () | 20027..20998 | - | 972 | WP_000817031.1 | ParB/RepB/Spo0J family plasmid partition protein | - |
| ECE24377A_RS01300 () | 20998..22164 | - | 1167 | WP_000772446.1 | Sporulation initiation inhibitor protein Soj | VF |
| ECE24377A_RS01310 () | 22697..23170 | - | 474 | Protein_26 | IS3 family transposase IS629 | Transposase |
| ECE24377A_RS01315 () | 23260..24768 | - | 1509 | WP_001189123.1 | group II intron reverse transcriptase/maturase | - |
| ECE24377A_RS29840 () | 25441..26180 | - | 740 | Protein_28 | IS3 family transposase IS1203 | Transposase |
| ECE24377A_RS01330 () | 26212..26700 | + | 489 | Protein_29 | IS110 family transposase ISShdy1 | Transposase |
| ECE24377A_RS29115 () | 27397..28182 | + | 786 | WP_000086139.1 | DUF1380 family protein | - |
| ECE24377A_RS01340 () | 28179..28370 | + | 192 | WP_001024838.1 | hypothetical protein | - |
| ECE24377A_RS30725 () | 28349..28684 | - | 336 | WP_041031721.1 | hypothetical protein | - |
| ECE24377A_RS01350 () | 29361..29591 | + | 231 | WP_000218642.1 | hypothetical protein | - |
| ECE24377A_RS01355 () | 29643..31004 | + | 1362 | WP_000170659.1 | DUF3560 domain-containing protein | - |
| ECE24377A_RS01360 () | 31051..31614 | + | 564 | WP_001365958.1 | class I SAM-dependent methyltransferase | - |
| ECE24377A_RS30730 () | 31703..32131 | - | 429 | Protein_36 | hypothetical protein | - |
| ECE24377A_RS01370 () | 32431..32727 | + | 297 | WP_001272251.1 | hypothetical protein | - |
| ECE24377A_RS01375 () | 32838..33659 | + | 822 | WP_001234441.1 | DUF945 domain-containing protein | - |
| ECE24377A_RS01380 () | 33956..34288 | - | 333 | Protein_39 | hypothetical protein | VF |
| ECE24377A_RS01385 () | 34347..35141 | - | 795 | WP_000544809.1 | IS21 family transposase ISEc62 | Transposase |
| ECE24377A_RS01390 () | 35141..36313 | - | 1173 | WP_000952428.1 | IS21 family transposase ISEc62 | Transposase |
| ECE24377A_RS29125 () | 36400..36750 | - | 351 | WP_001706493.1 | hypothetical protein | VF |
| ECE24377A_RS01400 () | 37061..37444 | + | 384 | WP_001137411.1 | relaxosome protein TraM | - |
| ECE24377A_RS01405 () | 38061..38336 | + | 276 | WP_000234737.1 | hypothetical protein | - |
| ECE24377A_RS01410 () | 38653..40191 | - | 1539 | WP_000998104.1 | IS66 family transposase ISEc8 | Transposase |
| ECE24377A_RS01415 () | 40241..40588 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| ECE24377A_RS01420 () | 40585..40965 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| ECE24377A_RS01425 () | 41065..41256 | - | 192 | WP_000957858.1 | hypothetical protein | - |
| ECE24377A_RS27230 () | 41412..41603 | - | 192 | WP_122994480.1 | ANR family transcriptional regulator | - |
| ECE24377A_RS01435 () | 41789..43023 | + | 1235 | WP_164968891.1 | IS3 family transposase IS2 | Transposase |
| ECE24377A_RS29135 () | 43189..43883 | + | 695 | WP_085950855.1 | IS1 family transposase | - |
| ECE24377A_RS30400 () | 43972..44199 | - | 228 | WP_140159966.1 | hypothetical protein | - |
| ECE24377A_RS01455 () | 44240..44917 | + | 678 | WP_001704819.1 | IS66 family transposase ISCro1 | Transposase |
| ECE24377A_RS01460 () | 44917..45264 | + | 348 | WP_000624622.1 | IS66 family transposase ISCro1 | Transposase |
| ECE24377A_RS01465 () | 45284..46855 | + | 1572 | WP_000381401.1 | IS66 family transposase ISCro1 | Transposase |
| ECE24377A_RS30735 () | 46882..47043 | + | 162 | Protein_56 | AAA family ATPase | - |
| ECE24377A_RS27240 () | 47113..47810 | - | 698 | Protein_57 | IS1 family transposase | - |
| ECE24377A_RS01480 () | 47839..48078 | - | 240 | WP_001355715.1 | IS3 family transposase ISBope1 | Transposase |
| ECE24377A_RS29140 () | 48182..48540 | + | 359 | Protein_59 | Tn3 family transposase | - |
| ECE24377A_RS01490 () | 49306..53406 | + | 4101 | WP_001045022.1 | Serine protease EatA | VF |
| ECE24377A_RS01495 () | 53749..54453 | - | 705 | WP_001119661.1 | helix-turn-helix domain-containing protein | - |
| ECE24377A_RS01500 () | 54701..55381 | + | 681 | WP_000452091.1 | EAL domain-containing protein | - |
| ECE24377A_RS01505 () | 55821..56462 | - | 642 | WP_000470631.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| ECE24377A_RS01515 () | 56792..57505 | - | 714 | WP_000016957.1 | site-specific integrase | - |
| ECE24377A_RS01520 () | 57506..57811 | - | 306 | WP_001159871.1 | type II toxin-antitoxin system toxin CcdB | Toxin Detail |
| ECE24377A_RS01525 () | 57813..58031 | - | 219 | WP_000813634.1 | type II toxin-antitoxin system antitoxin CcdA | Antitoxin Detail |
| ECE24377A_RS01530 () | 58476..58733 | + | 258 | WP_000343092.1 | hypothetical protein | - |
| ECE24377A_RS01535 () | 58733..59263 | + | 531 | WP_011387704.1 | hypothetical protein | - |
| ECE24377A_RS01540 () | 59507..60349 | + | 843 | WP_160371899.1 | polysaccharide deacetylase family protein | - |
| ECE24377A_RS26635 () | 60352..61440 | + | 1089 | WP_004100285.1 | putative hexosyltransferase CapU | - |
| ECE24377A_RS01550 () | 61445..62395 | + | 951 | WP_012000752.1 | virulence factor VirK | - |
| ECE24377A_RS01555 () | 62460..63405 | + | 946 | Protein_72 | Lipid A biosynthesis myristoyltransferase 2 | VF |
| ECE24377A_RS01560 () | 63467..63712 | - | 246 | Protein_73 | transposase | - |
| ECE24377A_RS26535 () | 63794..64980 | + | 1187 | Protein_74 | IS3 family transposase ISKpn38 | Transposase |
| ECE24377A_RS29865 () | 65042..65209 | - | 168 | Protein_75 | IS91 family transposase ISSbo1 | Transposase |
| ECE24377A_RS01580 () | 65257..66795 | - | 1539 | WP_000998104.1 | IS66 family transposase ISEc8 | Transposase |
| ECE24377A_RS01585 () | 66845..67192 | - | 348 | WP_000612591.1 | IS66 family transposase ISEc8 | Transposase |
| ECE24377A_RS01590 () | 67189..67569 | - | 381 | WP_001171554.1 | IS66 family transposase ISEc8 | Transposase |
| ECE24377A_RS01595 () | 67898..68257 | + | 360 | WP_001054220.1 | type IV conjugative transfer system pilin TraA | - |
| ECE24377A_RS01600 () | 68259..68564 | + | 306 | WP_000016323.1 | type IV conjugative transfer system protein TraL | - |
| ECE24377A_RS01605 () | 68584..69147 | + | 564 | WP_000406020.1 | type IV conjugative transfer system protein TraE | - |
| ECE24377A_RS26540 () | 69137..69388 | + | 252 | Protein_82 | conjugal transfer protein TraK | - |
| ECE24377A_RS01615 () | 69388..70839 | + | 1452 | Protein_83 | Coupling protein TraD | Relaxase |
| ECE24377A_RS01620 () | 71502..71915 | + | 414 | WP_077625677.1 | type-F conjugative transfer system pilin acetylase TraX | - |
| ECE24377A_RS27265 () | 72140..72322 | - | 183 | WP_001705320.1 | hypothetical protein | - |
| - () | 72566..72622 | - | 57 | NuclAT_1 | - | - |
| - () | 72566..72622 | - | 57 | NuclAT_1 | - | - |
| - () | 72566..72622 | - | 57 | NuclAT_1 | - | - |
| - () | 72566..72622 | - | 57 | NuclAT_1 | - | - |
| ECE24377A_RS01630 () | 72614..72820 | + | 207 | WP_032186826.1 | type I toxin-antitoxin system Hok family toxin | - |
| ECE24377A_RS01635 () | 73104..73364 | + | 261 | WP_000083817.1 | replication regulatory protein RepA | - |
| ECE24377A_RS27280 () | 73587..73661 | + | 75 | WP_001365571.1 | RepA leader peptide Tap | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|