MGE detailed information
MGE type: Non-Mobilizable plasmid MGE length: 38116 bp
Accession: NC_007506 Location: 1..38116 Organism: Xanthomonas campestris pv. vesicatoria str. 85-10 Replicon: plasmid pXCV38
Accession: NC_007506 Location: 1..38116 Organism: Xanthomonas campestris pv. vesicatoria str. 85-10 Replicon: plasmid pXCV38
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IS_RS00135 () | 407..736 | + | 330 | WP_007967027.1 | hypothetical protein | - |
| IS_RS00140 () | 1242..2060 | + | 819 | WP_011345581.1 | hypothetical protein | - |
| IS_RS00145 () | 2729..3049 | - | 321 | WP_007974210.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| IS_RS00150 () | 3049..3264 | - | 216 | WP_011345582.1 | antitoxin MazE family protein | Antitoxin Detail |
| IS_RS00155 () | 3510..3836 | - | 327 | WP_007974207.1 | hypothetical protein | - |
| IS_RS00160 () | 3833..4459 | - | 627 | WP_007974205.1 | Chromosome-partitioning ATPase Soj | VF |
| IS_RS00170 () | 4935..5621 | + | 687 | WP_007968793.1 | DNA-binding protein | - |
| IS_RS00175 () | 5780..6742 | + | 963 | WP_011345584.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| IS_RS00180 () | 6829..7059 | + | 231 | WP_046935364.1 | hypothetical protein | - |
| IS_RS00185 () | 7147..8373 | + | 1227 | WP_011345585.1 | IS256 family transposase ISXax1 | Transposase |
| IS_RS00190 () | 8780..9136 | - | 357 | WP_041854930.1 | hypothetical protein | - |
| IS_RS00200 () | 9318..10405 | + | 1088 | WP_087944893.1 | IS3 family transposase ISXac2 | Transposase |
| IS_RS00205 () | 10402..11088 | - | 687 | WP_011345588.1 | hypothetical protein | - |
| IS_RS00210 () | 11085..11540 | - | 456 | WP_011345589.1 | hypothetical protein | - |
| IS_RS00215 () | 11929..12324 | + | 396 | WP_011345590.1 | hypothetical protein | - |
| IS_RS00220 () | 12422..12691 | + | 270 | WP_033481412.1 | hypothetical protein | - |
| IS_RS00225 () | 12688..12981 | + | 294 | WP_011345592.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IS_RS00230 () | 13094..13714 | + | 621 | WP_011345593.1 | hypothetical protein | - |
| IS_RS26460 () | 13913..14254 | + | 342 | WP_029561219.1 | hypothetical protein | - |
| IS_RS00240 () | 14326..14523 | + | 198 | WP_011345595.1 | hypothetical protein | - |
| IS_RS00245 () | 14527..16101 | + | 1575 | WP_011345596.1 | type IV secretion system DNA-binding domain-containing protein | - |
| IS_RS00250 () | 16115..19090 | + | 2976 | WP_011345597.1 | Multifunctional conjugation protein TraI | Relaxase |
| IS_RS00255 () | 19160..19486 | - | 327 | WP_007968778.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| IS_RS00260 () | 19483..19701 | - | 219 | WP_033478260.1 | antitoxin MazE family protein | Antitoxin Detail |
| IS_RS00265 () | 19838..20254 | - | 417 | WP_017159868.1 | hypothetical protein | - |
| IS_RS00270 () | 20308..20721 | - | 414 | WP_041854931.1 | hypothetical protein | - |
| IS_RS00275 () | 20732..21307 | - | 576 | WP_041854932.1 | Phospholipase D | VF |
| IS_RS00280 () | 21350..21937 | - | 588 | WP_011345600.1 | hypothetical protein | - |
| IS_RS00285 () | 21983..22870 | - | 888 | WP_041854937.1 | Type IV secretion system protein virB1 | VF |
| IS_RS00290 () | 22881..23903 | - | 1023 | WP_007968768.1 | Type IV secretion system protein VirB11 | VF |
| IS_RS00295 () | 23914..25134 | - | 1221 | WP_011345602.1 | Type IV secretion system protein virB10 | VF |
| IS_RS00300 () | 25136..25918 | - | 783 | WP_011345603.1 | Type IV secretion system protein virB9 | VF |
| IS_RS00305 () | 25943..26617 | - | 675 | WP_011345604.1 | type IV secretion system protein | - |
| IS_RS00310 () | 26614..27480 | - | 867 | WP_011345605.1 | type IV secretion system protein | - |
| IS_RS00315 () | 27468..27875 | - | 408 | WP_011345606.1 | hypothetical protein | - |
| IS_RS00320 () | 27868..28083 | - | 216 | WP_017164424.1 | hypothetical protein | - |
| IS_RS00325 () | 28134..28706 | - | 573 | WP_011345607.1 | hypothetical protein | - |
| IS_RS00330 () | 28767..29465 | - | 699 | WP_005918428.1 | UPF0149 family protein | - |
| IS_RS00335 () | 29484..32459 | - | 2976 | WP_011345576.1 | Tn3 family transposase TnpA_ISXc4 | Transposase |
| IS_RS00340 () | 32464..32883 | - | 420 | WP_003491210.1 | putative toxin-antitoxin system toxin component, PIN family | - |
| IS_RS00345 () | 32883..33122 | - | 240 | WP_003491212.1 | ribbon-helix-helix domain-containing protein | - |
| IS_RS00350 () | 33337..34260 | + | 924 | WP_003491216.1 | Tn3 family transposase TnpR_ISXc4 | Transposase |
| IS_RS00355 () | 34380..37013 | - | 2634 | WP_011345608.1 | Type IV secretion system protein virB4 | VF |
| IS_RS00360 () | 37036..37335 | - | 300 | WP_041854933.1 | VirB3 family type IV secretion system protein | - |
| IS_RS00365 () | 37332..37709 | - | 378 | WP_011345609.1 | TrbC/VirB2 family protein | - |
| IS_RS00370 () | 37738..38019 | - | 282 | WP_041854934.1 | hypothetical protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|