MGE detailed information
MGE type: IScluster/Tn MGE length: 11300 bp
Accession: NC_006371 Location: 1340996..1352295 Organism: Photobacterium profundum SS9 Replicon: chromosome
Accession: NC_006371 Location: 1340996..1352295 Organism: Photobacterium profundum SS9 Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PBPR_RS24395 () | 1337191..1337718 | + | 528 | WP_041395186.1 | DUF3087 domain-containing protein | - |
| PBPR_RS24400 () | 1338574..1339551 | + | 978 | WP_041395831.1 | IS30 family transposase | - |
| PBPR_RS30860 () | 1339698..1339973 | - | 276 | WP_011221249.1 | hypothetical protein | - |
| PBPR_RS24410 () | 1339974..1340642 | - | 669 | WP_197535875.1 | hypothetical protein | - |
| PBPR_RS24415 () | 1340729..1341547 | + | 819 | Protein_1219 | Tyrosine recombinase XerC | VF |
| PBPR_RS24420 () | 1341544..1342571 | + | 1028 | Protein_1220 | transposase | - |
| PBPR_RS24425 () | 1342953..1343192 | + | 240 | WP_041395188.1 | type II toxin-antitoxin system ParD family antitoxin | Antitoxin Detail |
| PBPR_RS24430 () | 1343192..1343485 | + | 294 | WP_011221254.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PBPR_RS24435 () | 1343599..1344147 | - | 549 | WP_041395190.1 | hypothetical protein | - |
| PBPR_RS24440 () | 1344212..1345529 | - | 1318 | Protein_1224 | IS66 family transposase | - |
| PBPR_RS24450 () | 1345585..1347163 | + | 1579 | Protein_1225 | IS3-like element ISPpr7 family transposase | - |
| PBPR_RS24455 () | 1347203..1347673 | + | 471 | Protein_1226 | transposase | - |
| PBPR_RS24460 () | 1348085..1349209 | - | 1125 | WP_011221259.1 | ISAs1 family transposase ISPpr12 | Transposase |
| PBPR_RS24465 () | 1349928..1350176 | + | 249 | WP_011221260.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| PBPR_RS24470 () | 1350166..1350456 | + | 291 | WP_011221261.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| PBPR_RS24475 () | 1351009..1352295 | + | 1287 | WP_011218608.1 | IS4 family transposase ISPpr4 | Transposase |
| PBPR_RS24480 () | 1353209..1353835 | + | 627 | WP_011221263.1 | hypothetical protein | - |
| PBPR_RS29930 () | 1354299..1354472 | + | 174 | WP_157134408.1 | phage integrase N-terminal SAM-like domain-containing protein | - |
| PBPR_RS24485 () | 1354596..1355495 | - | 900 | WP_011221264.1 | ABC transporter substrate-binding protein | - |
| PBPR_RS24490 () | 1355502..1356377 | - | 876 | WP_006229498.1 | metal ABC transporter permease | - |
| PBPR_RS24495 () | 1356377..1357138 | - | 762 | WP_172636005.1 | ATP-binding cassette domain-containing protein | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|