MGE detailed information
MGE type: IScluster/Tn MGE length: 31423 bp
Accession: NC_004349 Location: 45061..76483 Organism: Shewanella oneidensis MR-1 Replicon: plasmid megaplasmid
Accession: NC_004349 Location: 45061..76483 Organism: Shewanella oneidensis MR-1 Replicon: plasmid megaplasmid
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SO_RS22360 () | 41113..42360 | - | 1248 | WP_011074383.1 | HlyD family efflux transporter periplasmic adaptor subunit | - |
| SO_RS22365 () | 43722..44090 | + | 369 | WP_011074384.1 | hypothetical protein | - |
| SO_RS22370 () | 44152..45012 | - | 861 | WP_164925945.1 | toprim domain-containing protein | - |
| SO_RS22375 () | 45061..46220 | + | 1160 | WP_141135407.1 | IS3 family transposase ISSod1 | Transposase |
| SO_RS22380 () | 46156..46482 | - | 327 | WP_193378421.1 | hypothetical protein | - |
| SO_RS22385 () | 46611..46793 | + | 183 | WP_011074385.1 | hypothetical protein | - |
| SO_RS22390 () | 47238..47987 | + | 750 | WP_011074387.1 | hypothetical protein | - |
| SO_RS22395 () | 48737..49027 | + | 291 | WP_011074388.1 | DUF1778 domain-containing protein | - |
| SO_RS22400 () | 49031..49558 | + | 528 | WP_011074389.1 | GNAT family N-acetyltransferase | - |
| SO_RS22405 () | 49745..50431 | + | 687 | WP_011074390.1 | hypothetical protein | VF |
| SO_RS22410 () | 50424..50783 | + | 360 | WP_011074391.1 | hypothetical protein | - |
| SO_RS22415 () | 50928..51485 | + | 558 | WP_011074392.1 | IS6 family transposase ISSod8 | Transposase |
| SO_RS22420 () | 51674..52591 | - | 918 | Protein_57 | IS256 family transposase ISSod4 | Transposase |
| SO_RS22425 () | 52829..53988 | + | 1160 | WP_141135407.1 | IS3 family transposase ISSod1 | Transposase |
| SO_RS22430 () | 53996..54424 | - | 429 | Protein_59 | hypothetical protein | - |
| SO_RS22435 () | 54504..55382 | - | 879 | WP_011074393.1 | hypothetical protein | - |
| SO_RS22440 () | 55521..55808 | - | 288 | WP_011074394.1 | transcriptional regulator | - |
| SO_RS22445 () | 55805..56140 | - | 336 | WP_011074395.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SO_RS22450 () | 56571..57275 | - | 705 | WP_011074396.1 | DUF2931 family protein | - |
| SO_RS22455 () | 57546..57962 | - | 417 | WP_011074397.1 | transcriptional regulator | Antitoxin Detail |
| SO_RS22460 () | 57968..58279 | - | 312 | WP_011074398.1 | type II toxin-antitoxin system HigB family toxin | Toxin Detail |
| SO_RS22465 () | 58421..58657 | - | 237 | Protein_66 | IS5/IS1182 family transposase | - |
| SO_RS22470 () | 58734..59492 | - | 759 | WP_011071076.1 | IS5 family transposase ISSod6 | Transposase |
| SO_RS22475 () | 59527..59880 | - | 354 | WP_164925946.1 | hypothetical protein | - |
| SO_RS22480 () | 59873..60175 | - | 303 | WP_164925947.1 | hypothetical protein | - |
| SO_RS22485 () | 60346..60981 | - | 636 | WP_011074400.1 | Tn3 family transposase TnpR_TnEc1 | Transposase |
| SO_RS22490 () | 61181..61423 | + | 243 | WP_011074401.1 | type II toxin-antitoxin system ParD family antitoxin | - |
| SO_RS22495 () | 61416..61715 | + | 300 | WP_011074402.1 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| SO_RS22500 () | 62110..62595 | - | 486 | WP_011074403.1 | immunity 26/phosphotriesterase HocA family protein | - |
| SO_RS22505 () | 62700..62918 | - | 219 | Protein_74 | IS3 family transposase ISSba3 | Transposase |
| SO_RS22510 () | 62973..63281 | - | 309 | Protein_75 | IS6 family transposase ISSba18 | Transposase |
| SO_RS22515 () | 63339..64541 | + | 1203 | WP_005054087.1 | IS256 family transposase ISSod4 | Transposase |
| SO_RS22520 () | 64574..64960 | - | 387 | Protein_77 | IS6 family transposase ISSod8 | Transposase |
| SO_RS22525 () | 65042..65566 | - | 525 | WP_164925948.1 | hypothetical protein | - |
| SO_RS22530 () | 65893..66451 | - | 559 | Protein_79 | IS6 family transposase ISSod8 | Transposase |
| SO_RS22535 () | 66535..67125 | - | 591 | WP_011074405.1 | Tn3 family transposase TnpR_ISArsp6 | Transposase |
| SO_RS22540 () | 67295..67555 | + | 261 | WP_011074406.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin Detail |
| SO_RS22545 () | 67555..67866 | + | 312 | WP_011074407.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin Detail |
| SO_RS22550 () | 67890..69248 | + | 1359 | Protein_83 | DUF4158 domain-containing protein | - |
| SO_RS22555 () | 69314..70473 | + | 1160 | WP_141135407.1 | IS3 family transposase ISSod1 | Transposase |
| SO_RS22560 () | 70482..72206 | + | 1725 | Protein_85 | Tn3 family transposase ISKox2 | Transposase |
| SO_RS22565 () | 72253..73026 | + | 774 | Protein_86 | IS4 family transposase ISSod3 | Transposase |
| SO_RS22570 () | 73412..74611 | + | 1200 | WP_011074409.1 | hypothetical protein | VF |
| SO_RS22575 () | 74611..75705 | + | 1095 | WP_011074410.1 | chromosome partitioning protein ParB | - |
| SO_RS22580 () | 75737..76495 | - | 759 | WP_011071076.1 | IS5 family transposase ISSod6 | Transposase |
| SO_RS22585 () | 77039..77434 | + | 396 | WP_011074411.1 | potassium channel family protein | - |
| SO_RS22590 () | 77713..79446 | + | 1734 | WP_011074412.1 | amidohydrolase | - |
| SO_RS22595 () | 79656..81470 | - | 1815 | WP_011074413.1 | amidohydrolase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|