MGE detailed information
MGE type: Prophage MGE length: 16148 bp
Accession: NC_002488 Location: 1775302..1791449 Organism: Xylella fastidiosa 9a5c Replicon: chromosome
Accession: NC_002488 Location: 1775302..1791449 Organism: Xylella fastidiosa 9a5c Replicon: chromosome
Gene structure
The 5 kb flanking regions of this MGE are displayed.
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| XF_RS08025 (XF1855) | 1771713..1773230 | + | 1518 | WP_031336591.1 | fumarate hydratase | - |
| XF_RS08030 (XF1856) | 1773425..1775194 | - | 1770 | WP_010894322.1 | aspartate--tRNA ligase | - |
| XF_RS08035 (XF1858) | 1775701..1776393 | + | 693 | WP_031336589.1 | 7-cyano-7-deazaguanine synthase QueC | - |
| XF_RS13385 | 1776528..1776899 | - | 372 | Protein_1575 | hypothetical protein | - |
| XF_RS08045 (XF1859) | 1777003..1778181 | + | 1179 | WP_010894325.1 | replication initiation factor domain-containing protein | - |
| XF_RS08050 (XF1860) | 1778168..1778500 | + | 333 | WP_010894326.1 | hypothetical protein | - |
| XF_RS14100 (XF1861) | 1778513..1778668 | + | 156 | WP_155114993.1 | hypothetical protein | - |
| XF_RS08055 (XF1862) | 1778757..1779080 | - | 324 | WP_031336866.1 | type II toxin-antitoxin system PemK/MazF family toxin | Toxin Detail |
| XF_RS08060 (XF1863) | 1779077..1779298 | - | 222 | WP_010894329.1 | antitoxin MazE family protein | Antitoxin Detail |
| XF_RS08065 (XF1864) | 1779582..1780016 | - | 435 | WP_010894330.1 | DUF3693 domain-containing protein | - |
| XF_RS08070 (XF1865) | 1780157..1780459 | + | 303 | WP_010894331.1 | hypothetical protein | - |
| XF_RS14105 | 1780446..1780760 | + | 315 | WP_143704178.1 | hypothetical protein | - |
| XF_RS08075 (XF1866) | 1780764..1780946 | + | 183 | WP_023906503.1 | hypothetical protein | - |
| XF_RS13395 (XF1867) | 1781514..1781942 | + | 429 | Protein_1585 | hypothetical protein | - |
| XF_RS08085 (XF1868) | 1781946..1782613 | + | 668 | Protein_1586 | hypothetical protein | - |
| XF_RS08090 (XF1869) | 1782606..1782890 | + | 285 | WP_010894335.1 | DUF2523 domain-containing protein | - |
| XF_RS08095 (XF1870) | 1782890..1783960 | + | 1071 | WP_010894336.1 | zonular occludens toxin domain-containing protein | - |
| XF_RS08100 (XF1871) | 1784137..1784385 | - | 249 | WP_010894337.1 | hypothetical protein | - |
| XF_RS13400 (XF1872) | 1784448..1784735 | - | 288 | WP_075584643.1 | hypothetical protein | - |
| XF_RS08105 (XF1873) | 1784956..1785306 | + | 351 | WP_195780010.1 | hypothetical protein | - |
| XF_RS08110 (XF1874) | 1785369..1785680 | + | 312 | WP_010894340.1 | hypothetical protein | - |
| XF_RS08115 (XF1875) | 1785857..1786936 | - | 1080 | WP_010894341.1 | zonular occludens toxin domain-containing protein | - |
| XF_RS08120 (XF1876) | 1786936..1787220 | - | 285 | WP_010894342.1 | DUF2523 domain-containing protein | - |
| XF_RS08125 (XF1877) | 1787213..1788478 | - | 1266 | WP_155114994.1 | hypothetical protein | - |
| XF_RS08130 (XF1878) | 1788499..1788720 | - | 222 | WP_010894344.1 | hypothetical protein | - |
| XF_RS08135 (XF1880) | 1788949..1789254 | - | 306 | WP_010894346.1 | hypothetical protein | - |
| XF_RS08140 (XF1881) | 1789521..1790108 | - | 588 | WP_010894347.1 | hypothetical protein | - |
| XF_RS08145 (XF1882) | 1790367..1790549 | - | 183 | WP_010894348.1 | hypothetical protein | - |
| XF_RS13405 (XF1883) | 1790553..1790819 | - | 267 | WP_010894349.1 | hypothetical protein | - |
| XF_RS08150 (XF1884) | 1790812..1791120 | - | 309 | WP_042463271.1 | hypothetical protein | - |
| XF_RS13410 | 1791266..1791559 | + | 294 | Protein_1602 | DUF3693 domain-containing protein | - |
| XF_RS08155 (XF1886) | 1791658..1792302 | - | 645 | WP_010894352.1 | histidine phosphatase family protein | - |
| XF_RS08160 (XF1887) | 1792367..1794442 | - | 2076 | WP_031336577.1 | S46 family peptidase | - |
Similar MGE(s)
Similar MGE(s) is defined as other TA-related MGE(s) with Mash distance < 0.01 to this MGE.
| Detail | Organism | MGE type | Related TA | Genome accession | Coordinates | Mash distance |
|---|---|---|---|---|---|---|
| Xylella fastidiosa strain U24d | Prophage | TA49820 | NZ_CP009790 | 1775287..1791435 | 0 |