SecReT4

T4SS
References

T4SS ID	696
Strain	Xenorhabdus nematophila ATCC 19061
Replicon	chromosome [Browse all T4SS(s) in this replicon]
Accession	NC_014228
Location	3529607..3546422
Name	Tfc
Function	NA
Classification	Type IVC; Type G
This T4SS is identified in this study.

T4SS components

Component	Tfc1	Tfc2	Tfc3	Tfc4	Tfc5	Tfc6	Tfc7	Tfc8	Tfc9
Number	0	1	1	0	1	1	0	1	1
Component	Tfc10	Tfc11	Tfc12	Tfc13	Tfc14	Tfc15	Tfc16	Tfc17	Tfc18
Number	0	1	1	1	1	1	1	0	0
Component	Tfc19	Tfc20	Tfc21	Tfc22	Tfc23	Tfc24
Number	0	0	0	0	0	0

The information of T4SS components from NC_014228

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	XNC1_3656	3524807..3525217 [-], 411	300724465	transposase
2	XNC1_3657	3525315..3525638 [-], 324	300724466	transposase
3	XNC1_3658	3525420..3525821 [+], 402	300724467	hypothetical protein
4	XNC1_3659	3525725..3527134 [-], 1410	300724468	hypothetical protein
5	XNC1_3660	3527540..3528589 [-], 1050	300724469	hypothetical protein
6	XNC1_3661	3528586..3528732 [-], 147	300724470	hypothetical protein
7	XNC1_3662	3529214..3529357 [+], 144	300724471	Sugar fermentation stimulation protein B
8	XNC1_3663	3529607..3530143 [+], 537	300724472	PilL protein (fragment)	Tfc2
9	XNC1_3664	3530140..3530838 [+], 699	300724473	hypothetical protein	Tfc3
10	XNC1_3665	3530817..3531356 [+], 540	300724474	hypothetical protein	Tfc5
11	XNC1_3666	3531353..3533419 [+], 2067	300724475	plasmid transfer protein	Tfc6
12	XNC1_3667	3533428..3534186 [+], 759	300724476	hypothetical protein	Tfc8
13	XNC1_3668 (dcm)	3534378..3535808 [+], 1431	300724477	DNA cytosine methylase
14	XNC1_3669 (vsr)	3535818..3536291 [+], 474	300724478	DNA mismatch endonuclease, patch repair protein
15	XNC1_3670	3536284..3537528 [+], 1245	300724479	type II restriction endonuclease
16	XNC1_3671	3537668..3538360 [-], 693	300724480	hypothetical protein
17	XNC1_3672	3538634..3538963 [+], 330	300724481	hypothetical protein	Tfc9
18	XNC1_3673	3538960..3539196 [+], 237	300724482	hypothetical protein
19	XNC1_3674	3539301..3539609 [+], 309	300724483	hypothetical protein
20	XNC1_3675	3539620..3539994 [+], 375	300724484	hypothetical protein	Tfc11
21	XNC1_3676	3539991..3540647 [+], 657	300724485	hypothetical protein	Tfc12
22	XNC1_3677	3540644..3541480 [+], 837	300724486	hypothetical protein	Tfc13
23	XNC1_3678	3541470..3542900 [+], 1431	300724487	hypothetical protein	Tfc14
24	XNC1_3679	3542900..3543256 [+], 357	300724488	hypothetical protein
25	XNC1_3680	3543244..3543645 [+], 402	300724489	lipoprotein	Tfc15
26	XNC1_3681	3543645..3546422 [+], 2778	300724490	hypothetical protein	Tfc16
27	XNC1_3682	3546491..3547102 [+], 612	300724491	transposase (fragment)
28	XNC1_3683	3547121..3547252 [+], 132	300724492	transposase (fragment)
29	XNC1_3684	3547351..3547686 [-], 336	300724493	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_014228