SecReT4

T4SS
References

T4SS ID	633
Strain	Xanthomonas campestris pv. vesicatoria str. 85-10
Replicon	plasmid pXCV38 [Browse all T4SS(s) in this replicon]
Accession	NC_007506
Location	21983..37709
Name	VirB
Function	conjugation
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	VirB1	VirB2	VirB3	VirB4	VirB5	VirB6	VirB7	VirB8	VirB9
Number	1	1	0	1	1	1	0	1	1
Component	VirB10	VirB11	VirD4
Number	1	1	0

The information of T4SS components from NC_007506

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	XCVc0023	19160..19486 [-], 327	78045288	putative PemK-like protein
2	XCVc0024	19483..19809 [-], 327	78045289	hypothetical protein
3	XCVc0025	19838..20434 [-], 597	78045290	hypothetical protein
4	XCVc0026	20732..21337 [-], 606	78045291	putative endonuclease
5	XCVc0027	21350..21937 [-], 588	78045292	putative secreted protein
6	XCVc0028 (virB1)	21983..22894 [-], 912	78045293	type IV secretion system protein VirB1	VirB1
7	XCVc0029 (virB11)	22881..23903 [-], 1023	78045294	type IV secretion system protein VirB11	VirB11
8	XCVc0030 (virB10)	23914..25134 [-], 1221	78045295	type IV secretion system protein VirB10	VirB10
9	XCVc0031 (virB9)	25136..25918 [-], 783	78045296	type IV secretion system protein VirB9	VirB9
10	XCVc0032 (virB8)	25943..26617 [-], 675	78045297	type IV secretion system protein VirB8	VirB8
11	XCVc0033 (virB6)	26614..27480 [-], 867	78045298	type IV secretion system protein VirB6	VirB6
12	XCVc0034	27468..27875 [-], 408	78045299	hypothetical protein
13	XCVc0035 (virB5)	28134..28706 [-], 573	78045300	putative type IV secretion system protein VirB5	VirB5
14	XCVc0036	28767..29465 [-], 699	78045301	hypothetical protein
15	XCVc0037	29484..32459 [-], 2976	78045302	Tn5045 transposase
16	XCVc0038	32464..32883 [-], 420	78045303	hypothetical protein
17	XCVc0039	32883..33122 [-], 240	78045304	hypothetical protein
18	XCVc0040	33337..34260 [+], 924	78045305	site-specific recombinase / resolvase family protein
19	XCVc0041 (virB4)	34380..37013 [-], 2634	78045306	type IV secretion system protein VirB4	VirB4
20	XCVc0042 (virB2)	37332..37709 [-], 378	78045307	type IV secretion system protein VirB2	VirB2
21	XCVc0043	37738..37995 [-], 258	78045308	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Thieme F; Koebnik R; Bekel T; Berger C; Boch J; Buttner D; Caldana C; Gaigalat L; Goesmann A; Kay S; Kirchner O; Lanz C; Linke B; McHardy AC; Meyer F; Mittenhuber G; Nies DH; Niesbach-Klosgen U; Patschkowski T; Ruckert C; Rupp O; Schneiker S; Schuster SC; Vorholter FJ; Weber E; Puhler A; Bonas U; Bartels D; Kaiser O (2005). Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence. J Bacteriol. 187(21):7254-66. [PudMed:16237009]