SecReT4

T4SS
References

T4SS ID	459
Strain	Pseudomonas syringae pv. phaseolicola 1448A
Replicon	plasmid small plasmid [Browse all T4SS(s) in this replicon]
Accession	NC_007275
Location	20077..35518
Name	VirB
Function	conjugation
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	VirB1	VirB2	VirB3	VirB4	VirB5	VirB6	VirB7	VirB8	VirB9
Number	1	1	1	1	1	1	1	1	1
Component	VirB10	VirB11	VirD4
Number	1	1	1

The information of T4SS components from NC_007275

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	PSPPH_B0019	15775..16971 [+], 1197	71725307	hydroxyglutarate oxidase
2	PSPPH_B0020	17001..18359 [+], 1359	71725296	major facilitator family transporter
3	PSPPH_B0021	18404..18601 [+], 198	71725276	hypothetical protein
4	PSPPH_B0022 (xre)	18615..18971 [-], 357	71725303	PbsX family transcriptional regulator
5	PSPPH_B0023	18999..19748 [+], 750	71725324	transcriptional regulator
6	PSPPH_B0024	19738..20049 [+], 312	71725270	hypothetical protein
7	PSPPH_B0025	20077..20790 [+], 714	71725328	conjugal transfer protein	VirB1
8	PSPPH_B0026	20787..21125 [+], 339	71725319	conjugal transfer protein	VirB2
9	PSPPH_B0027	21138..21626 [+], 489	71725325	conjugal transfer protein	VirB3
10	PSPPH_B0028	21475..24027 [+], 2553	71725274	conjugal transfer protein	VirB4
11	PSPPH_B0029	24024..24710 [+], 687	71725285	conjugal transfer protein	VirB5
12	PSPPH_B0030	24773..25096 [+], 324	71725299	hypothetical protein
13	PSPPH_B0031	25107..26042 [+], 936	71725288	conjugal transfer protein	VirB6
14	PSPPH_B0032	26101..26403 [+], 303	71725323	conjugal transfer protein	VirB7
15	PSPPH_B0033	26441..27229 [+], 789	71725308	conjugal transfer protein	VirB8
16	PSPPH_B0034	27219..28028 [+], 810	71725313	conjugal transfer protein	VirB9
17	PSPPH_B0035	28015..29415 [+], 1401	71725287	conjugal transfer protein	VirB10
18	PSPPH_B0036	29425..30456 [+], 1032	71725291	conjugal transfer protein	VirB11
19	PSPPH_B0037	30466..30822 [+], 357	71725315	hypothetical protein
20	PSPPH_B0038	30947..31180 [+], 234	71725298	hypothetical protein
21	PSPPH_B0039	31164..33554 [+], 2391	71725275	hypothetical protein
22	PSPPH_B0040	33579..33866 [+], 288	71725305	hypothetical protein
23	PSPPH_B0041	33866..35518 [+], 1653	71725295	conjugal transfer protein	VirD4
24	PSPPH_B0042	35558..35920 [+], 363	71725306	killer protein, putative
25	PSPPH_B0043 (topB2)	35948..38113 [+], 2166	71725309	DNA topoisomerase III
26	PSPPH_B0044	38140..38427 [+], 288	71725318	hypothetical protein
27	PSPPH_B0045	38451..39017 [+], 567	71725314	single-stranded DNA-binding protein
28	PSPPH_B0046	39151..40065 [+], 915	71725284	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Joardar V; Lindeberg M; Jackson RW; Selengut J; Dodson R; Brinkac LM; Daugherty SC; Deboy R; Durkin AS; Giglio MG; Madupu R; Nelson WC; Rosovitz MJ; Sullivan S; Crabtree J; Creasy T; Davidsen T; Haft DH; Zafar N; Zhou L; Halpin R; Holley T; Khouri H; Feldblyum T; White O; Fraser CM; Chatterjee AK; Cartinhour S; Schneider DJ; Mansfield J; Collmer A; Buell CR (2005). Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition. J Bacteriol. 187(18):6488-98. [PudMed:16159782]