 T4SS ID | 432 |
| Strain | Pseudomonas syringae pv. syringae plasmid pPSR1 (NC_005205) |
| Replicon | plasmid pPSR1 [Browse all T4SS(s) in this replicon] |
| Accession | NC_005205 |
| Location | 47681..60472 |
| Name | VirB |
| Function | conjugation |
| Classification | Type IVA; Type P |
 This T4SS has been mentioned in a genome sequencing report. | |
T4SS components |
| Component | VirB1 | VirB2 | VirB3 | VirB4 | VirB5 | VirB6 | VirB7 | VirB8 | VirB9 |
| Number | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
| Component | VirB10 | VirB11 | VirD4 | ||||||
| Number | 1 | 1 | 1 |
The information of T4SS components from NC_005205 | ||||||
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | pPSR1_p35 (bip) | 45673..46143 [-], 471 | 38257066 | Bip | ||
| 2 | pPSR1_p36 | 46230..46577 [-], 348 | 38257067 | Orf36 | ||
| 3 | pPSR1_p37 | 46844..47371 [+], 528 | 38257068 | Orf37 | ||
| 4 | pPSR1_p38 (virB1) | 47681..48388 [+], 708 | 38257069 | VirB1 | VirB1 | |
| 5 | pPSR1_p39 (virB2) | 48385..48723 [+], 339 | 38257070 | VirB2 | VirB2 | |
| 6 | pPSR1_p40 (virB3) | 48736..49224 [+], 489 | 38257071 | VirB3 | VirB3 | |
| 7 | pPSR1_p41 (virB4) | 49073..51619 [+], 2547 | 38257072 | VirB4 | VirB4 | |
| 8 | pPSR1_p42 (virB5) | 51622..52308 [+], 687 | 38257073 | VirB5 | VirB5 | |
| 9 | pPSR1_p43 (virB6) | 52706..53638 [+], 933 | 38257074 | VirB6 | VirB6 | |
| 10 | pPSR1_p44 (virB7) | 53706..54008 [+], 303 | 38257075 | VirB7 | VirB7 | |
| 11 | pPSR1_p45 (virB8) | 54046..54834 [+], 789 | 38257076 | VirB8 | VirB8 | |
| 12 | pPSR1_p46 (virB9) | 54824..55633 [+], 810 | 38257077 | VirB9 | VirB9 | |
| 13 | pPSR1_p47 (virB10) | 55620..56987 [+], 1368 | 38257078 | VirB10 | VirB10 | |
| 14 | pPSR1_p48 (virB11) | 56997..58028 [+], 1032 | 38257079 | hypothetical protein | VirB11 | |
| 15 | pPSR1_p49 (virD4) | 58814..60472 [+], 1659 | 38257080 | hypothetical protein | VirD4 | |
| 16 | pPSR1_p50 | 60903..63068 [+], 2166 | 38257081 | Orf50 | ||
| 17 | pPSR1_p51 (ssb) | 63927..64532 [+], 606 | 38257082 | single-stranded DNA-binding protein | ||
 Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any. |
Download FASTA format files |
| Proteins Genes |
(1) Zhao Y; Ma Z; Sundin GW (2005). Comparative genomic analysis of the pPT23A plasmid family of Pseudomonas syringae. J Bacteriol. 187(6):2113-26. [PudMed:15743960] 
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| (2) Sundin GW; Mayfield CT; Zhao Y; Gunasekera TS; Foster GL; Ullrich MS (2004). Complete nucleotide sequence and analysis of pPSR1 (72,601 bp), a pPT23A-family plasmid from Pseudomonas syringae pv. syringae A2. Mol Genet Genomics. 270(6):462-76. [PudMed:14634868] |
| This literature contains bioinformatics investigation |