T4SS ID414
StrainCitrobacter rodentium ICC168
Repliconplasmid pCROD2 [Browse all T4SS(s) in this replicon]
ClassificationType IVA; Type P
insolico This T4SS is identified in this study.

T4SS components

The information of T4SS components from NC_013718
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1ROD_p232118623..19420 [-], 798283488416hypothetical protein 
2ROD_p233119654..20166 [-], 513283488417putative partition-related protein 
3ROD_p234120163..20597 [-], 435283488418hypothetical protein 
4ROD_p235120669..21010 [-], 342283488419hypothetical protein 
5ROD_p236121272..22687 [-], 1416283488420hypothetical protein 
6ROD_p237122788..23093 [-], 306283488421putative conjugal transfer protein 
7ROD_p238123077..23499 [-], 423283488422putative conjugal transfer protein 
8ROD_p2391 (taxB)23508..25370 [-], 1863283488423putative conjugal transfer coupling protein TaxB  VirD4
9ROD_p2401 (triJ)25357..26385 [-], 1029283488424putative conjugal transfer protein TriJ  VirB11
10ROD_p2411 (triI)26387..27505 [-], 1119283488425putative conjugal transfer protein TriI  VirB10
11ROD_p2421 (triH)27498..28406 [-], 909283488426putative conjugal transfer protein TriH  VirB9
12ROD_p2431 (triG)28403..29089 [-], 687283488427putative conjugal transfer protein TriG  VirB8
13ROD_p2441 (triF)29082..29210 [-], 129283488428putative conjugal transfer protein TriF 
14ROD_p2451 (triE)29604..30683 [-], 1080283488429putative conjugal transfer protein TriE  VirB6
15ROD_p247131089..32057 [+], 969283488430IS102 transposase 
16ROD_p2481 (triC)32473..35220 [-], 2748283488431putative conjugal transfer protein TriC  VirB4
17ROD_p2491 (triB)35239..35565 [-], 327283488432putative conjugal transfer protein TriB  VirB2
18ROD_p2501 (triA)35579..36199 [-], 621283488433putative conjugal transfer protein TriA  VirB1
19ROD_p2511 (eex)36637..36870 [-], 234283488434putative surface exclusion lipoprotein 
20ROD_p252136875..37141 [-], 267283488435hypothetical protein 
21ROD_p2531 (taxC)37218..38447 [-], 1230283488436putative DNA relaxase/nickase TaxC 
22ROD_p254138451..38954 [-], 504283488437conserved hypothetical plasmid protein 
23ROD_p255138958..39158 [-], 201283488438hypothetical protein 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
Identified as part of this study from NC_013718