SecReT4
Protein ID: 283488431
T4SS name [ID]VirB [414]
Gene symboltriC
Locus tagROD_p2481
StrainCitrobacter rodentium ICC168
Repliconplasmid pCROD2 [GenBank: NC_013718] [Browse all T4SS(s) in this replicon]
Location [Strand]32473..35220 [-]
Productputative conjugal transfer protein TriC
Component typeVirB4
UniProt IDD2TVB3
KEGG IDcro:ROD_p2481
PDB IDNA
Domain hit(s) vs Pfam CagE_TrbE_VirB [PF03135], Evalue: 1e-47, Aligned region: 269..472
AAA_10 [PF12846], Evalue: 1.3e-26, Aligned region: 536..834
VirB3 [PF05101], Evalue: 1.8e-13, Aligned region: 2..84
Protein Sequence: 915 a.a.     [Download]
>gi|283488431|ref|YP_003368547.1| putative conjugal transfer protein TriC [Citrobacter rodentium ICC168]
MSTLYKAMTRPAMYVGVPVVPLTVVAGALFLAGVYISKLIWLAIPVAVFILRMITKQDDHIFNLYFLKLK
MLGNSVCNRFFGARAFLSGQYEAVEIDEFINAMKLNERITTGKYIPYSSHVDKNIVKTKNGDYVATWQLM
GINFESISAEMLETIDSQVATLVRSFSGLPVSFYNHSCRASFYDAFTTKSGNKYADIISDCYYGSMKKNK
FKGNTLYFTLIYRPDGRVEKLEKRKKSIKEKKDDINIHVKRMNEMINTFSGALDKFTCKLLGMYEENGKV
FSSQLSFYNYLLTGKLQKIRVTDSPVYNVLGGVDVFFNHDTGQICRIDGNKFFRSIEIKDFCSETASGVF
DVLQYSDADYIITHSYTSMSKSEALSTIKRAEKQLKSTEDDAVTQLQELEKAKNDIVSGDISFGYYHFTL
MVMADSIRELDESVSKITADFTDLGIIPALSTMSLPAAYFAQLPAVFHLRPRLSPVSNVNFVELASFHNF
YQGKRDKNCWTEAVAILKTPSKQAYYLNLHNSVLFKDERGEKNLANTKVIGTAGSGKTMFLSYLACSLQK
YNNPETFADSAKNKKLTCVFLDKDRGAELCIRMLGGEYYTVKSGEPTGWNPFALEATKRNRIFVKQLMEI
LCTRNGERLSTRERLLISESVDAVMDFPPGEMREYGITRMLEHLMQRDDRDEQENGIILRLSQWANGQAH
GWVFDNAKDTFNIQHVNNFGIDGTEFLDDPMVCAPITFYLLYRITQLLDGRRLVIFLDEFWKWLQDEAFS
DFVYNKLKTIRKLNGLVIPATQSPDEILKNKISRAVVEVCSTSIYLANPDADYNDYVEGLKLTPEEFNIV
KNLDPMSRQFLIKKSSLKKGDGKSFSALATLDLSGLGGYLKILSASADNLEIFESIYHEGMEPDDWVPEY
LERAI
 
Nucleotide Sequence: 2748 bp     [Download]
>gi|283488383|ref|NC_013718.1|:c35220-32473 Citrobacter rodentium ICC168 plasmid pCROD2, complete sequence
ATGTCTACACTTTATAAAGCGATGACACGCCCTGCTATGTATGTGGGTGTTCCTGTCGTCCCTCTTACTG
TGGTTGCAGGGGCGTTATTTCTGGCGGGGGTTTATATCAGCAAGCTGATCTGGCTGGCTATTCCTGTCGC
AGTTTTTATTCTCAGAATGATAACTAAGCAGGACGACCACATTTTTAATCTTTACTTTCTTAAGCTGAAA
ATGCTCGGAAACTCAGTGTGTAATCGTTTTTTTGGCGCACGAGCGTTCCTCTCCGGACAATATGAAGCTG
TTGAAATTGATGAGTTTATTAATGCCATGAAACTGAATGAGCGAATTACTACTGGTAAATATATACCCTA
TTCAAGCCATGTTGATAAAAATATTGTCAAAACAAAGAACGGTGATTATGTAGCGACATGGCAACTGATG
GGGATTAACTTTGAGTCAATCTCTGCGGAGATGTTAGAAACTATTGACTCACAGGTTGCCACTCTTGTTC
GTTCATTTTCCGGACTGCCCGTTTCATTTTATAACCATTCATGCAGGGCGAGTTTTTATGATGCCTTTAC
CACAAAATCAGGTAATAAATATGCTGATATAATATCAGATTGTTATTATGGTTCGATGAAGAAAAATAAA
TTCAAGGGGAACACACTTTACTTTACGCTGATCTACAGACCAGACGGGCGTGTAGAAAAACTGGAAAAAC
GCAAAAAAAGTATTAAAGAAAAGAAAGATGATATTAACATTCATGTGAAGAGAATGAATGAAATGATTAA
TACATTCTCTGGCGCTCTTGATAAATTTACCTGTAAACTTCTTGGTATGTATGAGGAGAACGGAAAGGTA
TTTTCTTCTCAACTGTCATTCTATAATTATCTTCTGACAGGGAAGTTGCAAAAAATCAGAGTCACTGATT
CTCCGGTGTATAACGTTCTTGGTGGAGTGGATGTATTTTTTAATCATGATACCGGACAGATATGCCGCAT
TGATGGAAATAAATTCTTTCGTTCTATTGAAATTAAAGATTTCTGTAGTGAGACTGCATCCGGTGTTTTT
GATGTGCTCCAGTATTCTGATGCTGACTATATTATTACGCATTCATATACATCCATGAGCAAATCAGAAG
CATTGAGTACCATTAAACGTGCAGAAAAACAGTTAAAGAGTACAGAAGATGATGCGGTTACTCAATTGCA
GGAACTGGAAAAGGCAAAAAATGATATTGTGTCCGGTGATATATCCTTTGGTTACTACCATTTCACGCTA
ATGGTAATGGCGGACAGTATCAGGGAGCTTGACGAATCTGTAAGTAAAATTACGGCAGACTTTACTGACC
TGGGCATTATTCCGGCATTGTCAACCATGTCATTGCCAGCGGCATATTTTGCCCAGCTTCCGGCGGTTTT
TCATTTAAGGCCGCGTTTATCTCCGGTATCGAATGTAAATTTTGTCGAACTGGCATCATTCCATAATTTC
TACCAGGGGAAACGCGATAAAAACTGCTGGACAGAAGCGGTTGCTATTCTCAAAACACCAAGCAAACAGG
CGTATTATCTGAATTTACATAACTCAGTACTGTTTAAAGATGAAAGAGGTGAAAAGAATCTTGCTAATAC
TAAAGTTATAGGAACGGCGGGTTCAGGTAAGACAATGTTTCTGTCATATCTTGCCTGTTCATTACAGAAA
TACAATAACCCCGAAACTTTTGCTGACTCTGCAAAAAATAAGAAGTTAACGTGTGTCTTTCTTGATAAGG
ACAGAGGGGCTGAATTATGTATCCGAATGCTTGGTGGGGAATATTACACCGTAAAAAGCGGTGAGCCGAC
AGGATGGAATCCTTTTGCTCTGGAGGCAACAAAACGTAACCGTATTTTTGTCAAGCAACTGATGGAGATT
CTGTGTACCAGAAATGGTGAAAGATTATCGACAAGAGAAAGATTGCTTATTAGCGAAAGTGTTGATGCTG
TGATGGATTTTCCTCCTGGCGAAATGCGGGAATATGGCATTACCAGAATGCTTGAGCATCTTATGCAGAG
AGATGATCGGGATGAGCAGGAGAACGGGATTATCCTTCGTTTGTCCCAATGGGCTAATGGTCAGGCTCAT
GGCTGGGTTTTTGATAATGCTAAAGACACATTCAATATTCAGCATGTCAATAATTTTGGCATTGATGGCA
CCGAGTTTCTTGATGATCCGATGGTATGTGCACCAATTACTTTCTATCTGCTGTATCGCATTACGCAGCT
TCTGGACGGTCGGCGTCTTGTTATCTTCCTGGATGAGTTCTGGAAATGGCTACAGGATGAAGCATTCAGC
GATTTTGTCTATAACAAGCTGAAAACAATTCGTAAGCTGAACGGGCTGGTTATTCCGGCAACTCAGTCTC
CGGATGAAATACTGAAGAATAAGATTTCACGGGCTGTGGTTGAAGTATGCAGCACCAGTATTTATCTGGC
TAACCCTGATGCCGATTACAATGACTATGTAGAAGGGCTTAAGCTGACACCAGAAGAATTTAATATTGTT
AAAAATCTTGATCCAATGTCGAGACAATTCCTGATTAAAAAAAGCAGTCTTAAAAAGGGAGATGGTAAAT
CATTTTCAGCACTTGCGACACTCGATTTATCGGGACTTGGTGGATATCTGAAAATATTGTCTGCCAGTGC
AGATAATCTGGAAATTTTTGAAAGTATTTATCATGAAGGAATGGAGCCTGATGACTGGGTTCCTGAATAT
CTCGAACGGGCAATCTGA