 T4SS ID | 409 |
| Strain | Yersinia pseudotuberculosis IP 32953 |
| Replicon | plasmid pYptb32953 [Browse all T4SS(s) in this replicon] |
| Accession | NC_006154 |
| Location | 2572..20266 |
| Name | VirB |
| Function | conjugation |
| Classification | Type IVA; Type P |
 This T4SS has been mentioned in a genome sequencing report. | |
T4SS components |
| Component | VirB1 | VirB2 | VirB3 | VirB4 | VirB5 | VirB6 | VirB7 | VirB8 | VirB9 |
| Number | 1 | 1 | 0 | 1 | 1 | 1 | 0 | 1 | 1 |
| Component | VirB10 | VirB11 | VirD4 | ||||||
| Number | 1 | 1 | 1 |
The information of T4SS components from NC_006154 | ||||||
  | ||||||
| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | pYptb0001 (rep) | 202..1188 [+], 987 | 51593943 | plasmid replication protein | ||
| 2 | pYptb0002 | 1316..1624 [+], 309 | 51593944 | hypothetical protein | ||
| 3 | pYptb0003 | 1910..2137 [+], 228 | 51593945 | hypothetical protein | ||
| 4 | pYptb0004 (triA) | 2572..3189 [+], 618 | 51593946 | TriA protein | VirB1 | |
| 5 | pYptb0005 (triB) | 3194..3487 [+], 294 | 51593947 | TriB protein | VirB2 | |
| 6 | pYptb0006 (triC) | 3506..6253 [+], 2748 | 51593948 | TriC protein | VirB4 | |
| 7 | pYptb0007 (triD) | 6318..7031 [+], 714 | 51593949 | TriD protein | VirB5 | |
| 8 | pYptb0008 | 7097..7348 [+], 252 | 51593950 | antitoxin YefM | ||
| 9 | pYptb0009 | 7345..7599 [+], 255 | 51593951 | hypothetical protein | ||
| 10 | pYptb0010 | 7718..7963 [+], 246 | 51593952 | hypothetical protein | ||
| 11 | pYptb0011 (triE) | 7975..9015 [+], 1041 | 51593953 | TriE protein | VirB6 | |
| 12 | pYptb0012 (triG) | 9186..9869 [+], 684 | 51593954 | TriG protein | VirB8 | |
| 13 | pYptb0013 (triH) | 9869..10816 [+], 948 | 51593955 | TriH protein | VirB9 | |
| 14 | pYptb0014 (triI) | 10813..12045 [+], 1233 | 51593956 | TriI protein | VirB10 | |
| 15 | pYptb0015 (triJ) | 12262..13275 [+], 1014 | 51593957 | TriJ protein | VirB11 | |
| 16 | pYptb0016 | 13272..13694 [+], 423 | 51593958 | hypothetical protein | ||
| 17 | pYptb0017 | 14071..14376 [+], 306 | 51593959 | hypothetical protein | ||
| 18 | pYptb0018 | 14519..15769 [+], 1251 | 51593960 | hypothetical protein | ||
| 19 | pYptb0019 | 15826..16092 [+], 267 | 51593961 | hypothetical protein | ||
| 20 | pYptb0020 | 16111..16524 [+], 414 | 51593962 | DNA-binding protein | ||
| 21 | pYptb0021 | 16529..16801 [+], 273 | 51593963 | hypothetical protein | ||
| 22 | pYptb0022 | 16823..16996 [+], 174 | 51593964 | hypothetical protein | ||
| 23 | pYptb0023 | 17081..17212 [+], 132 | 51593965 | hypothetical protein | ||
| 24 | pYptb0024 | 17219..17344 [+], 126 | 51593966 | hypothetical protein | ||
| 25 | pYptb0025 | 17341..17463 [+], 123 | 51593967 | hypothetical protein | ||
| 26 | pYptb0026 | 17463..17522 [+], 60 | 51593968 | hypothetical protein | ||
| 27 | pYptb0027 | 17550..17672 [+], 123 | 51593969 | hypothetical protein | ||
| 28 | pYptb0029 (triK) | 18485..20266 [+], 1782 | 51593970 | TriK protein | VirD4 | |
| 29 | pYptb0030 (triL) | 20274..21014 [+], 741 | 51593971 | TriL protein | ||
| 30 | pYptb0031 (topB) | 21070..23232 [+], 2163 | 51593972 | DNA topoisomerase III family protein | ||
| 31 | pYptb0032 | 23291..23443 [+], 153 | 51593973 | hypothetical protein | ||
| 32 | pYptb0033 | 23475..23636 [+], 162 | 51593974 | hypothetical protein | ||
| 33 | pYptb0034 | 23751..23999 [+], 249 | 51593975 | hypothetical protein | ||
| 34 | pYptb0035 (ArdC) | 24036..25016 [-], 981 | 51593976 | antirestriction protein | ||
 Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any. |
Download FASTA format files |
| Proteins Genes |
| (1) Chain PS; Carniel E; Larimer FW; Lamerdin J; Stoutland PO; Regala WM; Georgescu AM; Vergez LM; Land ML; Motin VL; Brubaker RR; Fowler J; Hinnebusch J; Marceau M; Medigue C; Simonet M; Chenal-Francisque V; Souza B; Dacheux D; Elliott JM; Derbise A; Hauser LJ; Garcia E (2004). Insights into the evolution of Yersinia pestis through whole-genome comparison with Yersinia pseudotuberculosis. Proc Natl Acad Sci U S A. 101(38):13826-31. [PudMed:15358858] |