T4SS ID | 408 |
Strain | Cronobacter sakazakii ATCC BAA-894 |
Replicon | plasmid pESA2 [Browse all T4SS(s) in this replicon] |
Accession | NC_009779 |
Location | 752..2488; 19928..29880 |
Name | VirB |
Function | NA |
Classification | Type IVA; Type P |
This T4SS is identified in this study. |
T4SS components |
Component | VirB1 | VirB2 | VirB3 | VirB4 | VirB5 | VirB6 | VirB7 | VirB8 | VirB9 |
Number | 1 | 1 | 0 | 1 | 1 | 1 | 0 | 1 | 1 |
Component | VirB10 | VirB11 | VirD4 | ||||||
Number | 1 | 1 | 1 |
The information of T4SS components from NC_009779 | ||||||
Region 1: 752..2488 | ||||||
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
1 | ESA_pESA2p06554 | 406..702 [+], 297 | 156936508 | hypothetical protein | ||
2 | ESA_pESA2p06555 | 752..2488 [+], 1737 | 156936509 | hypothetical protein | VirD4 | |
3 | ESA_pESA2p06556 | 2497..3246 [+], 750 | 156936510 | hypothetical protein | ||
4 | ESA_pESA2p06557 | 3284..3757 [+], 474 | 156936511 | hypothetical protein | ||
5 | ESA_pESA2p06558 | 3799..4158 [+], 360 | 156936512 | hypothetical protein | ||
6 | ESA_pESA2p06559 | 4197..4430 [-], 234 | 156936513 | hypothetical protein | ||
7 | ESA_pESA2p06560 | 4471..5118 [-], 648 | 156936514 | hypothetical protein | ||
8 | ESA_pESA2p06561 | 5552..6526 [-], 975 | 156936515 | hypothetical protein | ||
Region 2: 19928..29880 | ||||||
# | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
1 | ESA_pESA2p06572 | 15496..16263 [-], 768 | 156936526 | hypothetical protein | ||
2 | ESA_pESA2p06573 | 17182..17781 [-], 600 | 156936527 | hypothetical protein | ||
3 | ESA_pESA2p06574 | 18344..18700 [-], 357 | 156936528 | hypothetical protein | ||
4 | ESA_pESA2p06575 | 18948..19397 [+], 450 | 156936529 | hypothetical protein | ||
5 | ESA_pESA2p06576 | 19472..19687 [+], 216 | 156936530 | hypothetical protein | ||
6 | ESA_pESA2p06577 | 19691..19912 [+], 222 | 156936531 | hypothetical protein | ||
7 | ESA_pESA2p06578 | 19928..20638 [+], 711 | 156936532 | hypothetical protein | VirB1 | |
8 | ESA_pESA2p06579 | 20635..20913 [+], 279 | 156936533 | hypothetical protein | VirB2 | |
9 | ESA_pESA2p06580 | 20926..23670 [+], 2745 | 156936534 | hypothetical protein | VirB4 | |
10 | ESA_pESA2p06581 | 23722..24390 [+], 669 | 156936535 | hypothetical protein | VirB5 | |
11 | ESA_pESA2p06582 | 24400..24627 [+], 228 | 156936536 | hypothetical protein | ||
12 | ESA_pESA2p06583 | 24639..25715 [+], 1077 | 156936537 | hypothetical protein | VirB6 | |
13 | ESA_pESA2p06584 | 25793..25930 [+], 138 | 156936538 | hypothetical protein | ||
14 | ESA_pESA2p06585 | 25923..26606 [+], 684 | 156936539 | hypothetical protein | VirB8 | |
15 | ESA_pESA2p06586 | 26603..27511 [+], 909 | 156936540 | hypothetical protein | VirB9 | |
16 | ESA_pESA2p06587 | 27554..28858 [+], 1305 | 156936541 | hypothetical protein | VirB10 | |
17 | ESA_pESA2p06588 | 28855..29880 [+], 1026 | 156936542 | hypothetical protein | VirB11 | |
18 | ESA_pESA2p06589 | 29877..30275 [+], 399 | 156936543 | hypothetical protein | ||
19 | ESA_pESA2p06590 | 30302..30607 [+], 306 | 156936544 | hypothetical protein | ||
20 | ESA_pESA2p06591 | 30887..31192 [+], 306 | 156936545 | hypothetical protein | ||
Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any. |
Download FASTA format files |
Proteins Genes |
Identified as part of this study from NC_009779 |