 T4SS ID | 407 |
| Strain | Citrobacter koseri ATCC BAA-895 |
| Replicon | chromosome [Browse all T4SS(s) in this replicon] |
| Accession | NC_009792 |
| Location | 870917..884763 |
| Name | VirB |
| Function | conjugation |
| Classification | Type IVA; Type P |
 Bioinformatics investigation has been performed on this T4SS. | |
T4SS components |
| Component | VirB1 | VirB2 | VirB3 | VirB4 | VirB5 | VirB6 | VirB7 | VirB8 | VirB9 |
| Number | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 |
| Component | VirB10 | VirB11 | VirD4 | ||||||
| Number | 1 | 1 | 1 |
The information of T4SS components from NC_009792 | ||||||
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | CKO_00875 | 866152..867612 [+], 1461 | 157145142 | hypothetical protein | ||
| 2 | CKO_00876 | 867758..868327 [+], 570 | 157145143 | hypothetical protein | ||
| 3 | CKO_00877 | 868362..868874 [+], 513 | 157145144 | hypothetical protein | ||
| 4 | CKO_00878 | 869101..869256 [+], 156 | 157145145 | hypothetical protein | ||
| 5 | CKO_00879 | 870144..870908 [-], 765 | 157145146 | hypothetical protein | ||
| 6 | CKO_00880 | 870917..872671 [-], 1755 | 157145147 | hypothetical protein | VirD4 | |
| 7 | CKO_00881 | 872747..873001 [-], 255 | 157145148 | hypothetical protein | ||
| 8 | CKO_00882 | 873294..873581 [+], 288 | 157145149 | hypothetical protein | ||
| 9 | CKO_00883 | 873434..873739 [-], 306 | 157145150 | hypothetical protein | ||
| 10 | CKO_00884 | 873782..874150 [-], 369 | 157145151 | hypothetical protein | ||
| 11 | CKO_00885 | 874117..874515 [-], 399 | 157145152 | hypothetical protein | ||
| 12 | CKO_00886 | 874512..875537 [-], 1026 | 157145153 | hypothetical protein | VirB11 | |
| 13 | CKO_00888 | 875527..875847 [-], 321 | 157145155 | hypothetical protein | ||
| 14 | CKO_00887 | 875696..875869 [+], 174 | 157145154 | hypothetical protein | ||
| 15 | CKO_00889 | 875859..877103 [-], 1245 | 157145156 | hypothetical protein | VirB10 | |
| 16 | CKO_00890 | 877147..878055 [-], 909 | 157145157 | hypothetical protein | VirB9 | |
| 17 | CKO_00891 | 878052..878735 [-], 684 | 157145158 | hypothetical protein | VirB8 | |
| 18 | CKO_00892 | 878728..878880 [-], 153 | 157145159 | hypothetical protein | VirB7 | |
| 19 | CKO_00893 | 878957..880030 [-], 1074 | 157145160 | hypothetical protein | VirB6 | |
| 20 | CKO_00894 | 880034..880276 [-], 243 | 157145161 | hypothetical protein | ||
| 21 | CKO_00895 | 880284..880991 [-], 708 | 157145162 | hypothetical protein | VirB5 | |
| 22 | CKO_00896 | 881009..883747 [-], 2739 | 157145163 | hypothetical protein | VirB4 | |
| 23 | CKO_00897 | 883760..884053 [-], 294 | 157145164 | hypothetical protein | VirB2 | |
| 24 | CKO_00898 | 884053..884763 [-], 711 | 157145165 | hypothetical protein | VirB1 | |
| 25 | CKO_00899 | 884836..885069 [-], 234 | 157145166 | hypothetical protein | ||
| 26 | CKO_00900 | 885330..885470 [+], 141 | 157145167 | hypothetical protein | ||
| 27 | CKO_00901 | 885638..885766 [-], 129 | 157145168 | hypothetical protein | ||
| 28 | CKO_00902 | 886208..886789 [-], 582 | 157145169 | hypothetical protein | ||
| 29 | CKO_00903 | 886978..887163 [-], 186 | 157145170 | hypothetical protein | ||
| 30 | CKO_00904 | 887303..888229 [-], 927 | 157145171 | hypothetical protein | ||
 Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any. |
Download FASTA format files |
| Proteins Genes |
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(1) Bi D; Xu Z; Harrison EM; Tai C; Wei Y; He X; Jia S; Deng Z; Rajakumar K; Ou HY (2012). ICEberg: a web-based resource for integrative and conjugative elements found in Bacteria. Nucleic Acids Res. 40(Database issue):D621-6. [PudMed:22009673]
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| This literature contains bioinformatics investigation |