T4SS ID399
StrainRickettsia prowazekii str. Madrid E
Repliconchromosome [Browse all T4SS(s) in this replicon]
Location114023..127687; 351787..359722; 983022..985454
ClassificationType IVA; Type P
insolico Bioinformatics investigation has been performed on this T4SS.

T4SS components

The information of T4SS components from NC_000963
Region 1: 114023..127687
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1RP098109367..109618 [+], 25215603976hypothetical protein 
2RP099 (rpmB)111301..111594 [+], 2941560397750S ribosomal protein L28 
3RP100111591..111827 [+], 2371560397850S ribosomal protein L31 
4RP102 (engB)112320..112964 [+], 64515603979ribosome biogenesis GTP-binding protein YsxC 
5RP103114023..116440 [+], 241815603980type IV secretion system ATPase VirB4  VirB4
6RP104116558..119932 [+], 337515603981hypothetical protein  VirB6
7RP105119919..121937 [+], 201915603982hypothetical protein  VirB6
8RP106121944..124859 [+], 291615603983hypothetical protein  VirB6
9RP107125021..127687 [+], 266715603984hypothetical protein  VirB6
10RP108127814..131281 [+], 346815603985hypothetical protein 
Region 2: 351787..359722
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1RP283348205..349665 [-], 146115604152monovalent cation/H+ antiporter subunit D 
2RP284349717..351015 [-], 129915604153monovalent cation/H+ antiporter subunit D 
3RP285351333..351773 [-], 44115604154monovalent cation/H+ antiporter subunit C 
4RP286351787..352539 [-], 75315604155conjugal transfer protein TrbG precursor  VirB9
5RP287352541..353284 [-], 74415604156VirB8 
6RP288353689..353868 [+], 18015604157hypothetical protein 
7RP289353919..354650 [+], 73215604158hypothetical protein  VirB8
8RP290354637..355110 [+], 47415604159VIRB9 protein precursor (virB9)  VirB9
9RP291355193..356644 [+], 145215604160VIRB10 protein (virB10)  VirB10
10RP292356641..357645 [+], 100515604161type IV secretion system ATPase VirB11  VirB11
11RP293357947..359722 [+], 177615604162type IV secretion system component VirD4  VirD4
12RP294359731..361143 [+], 141315604163guanosine pentaphosphate phosphohydrolase 
13RP295362863..363759 [+], 89715604164hypothetical protein 
14RP296363743..364567 [+], 82515604165hypothetical protein 
Region 3: 983022..985454
#Locus tag (Gene)Coordinates [+/-], size (bp)Protein GIProductComponent
1RP781979316..980581 [+], 126615604613muropeptide permease AmpG 
2RP782980757..981512 [+], 75615604614hypothetical protein 
3RP783981490..982767 [+], 127815604615seryl-tRNA synthetase 
4RP784983022..985454 [+], 243315604616VIRB4 protein precursor (virB4)  VirB4
5RP785985567..989076 [+], 351015604617hypothetical protein 
6RP786989081..989974 [+], 89415604618tellurium resistance protein TERC (terC) 
7RP787990030..990212 [+], 18315604619hypothetical protein 
flank Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files
Proteins        Genes
(1) Gillespie JJ; Ammerman NC; Dreher-Lesnick SM; Rahman MS; Worley MJ; Setubal JC; Sobral BS; Azad AF (2009). An anomalous type IV secretion system in Rickettsia is evolutionarily conserved. PLoS One. 4(3):e4833. [PudMed:19279686] in_silico
in_silico This literature contains bioinformatics investigation