SecReT4

T4SS
References

T4SS ID	398
Strain	Campylobacter lari RM2100
Replicon	plasmid megaplasmid pCL2100 [Browse all T4SS(s) in this replicon]
Accession	NC_012040
Location	11349..25423
Name	VirB
Function	NA
Classification	Type IVA; Type P
This T4SS has been mentioned in a genome sequencing report.

T4SS components

Component	VirB1	VirB2	VirB3	VirB4	VirB5	VirB6	VirB7	VirB8	VirB9
Number	0	1	0	1	1	1	0	1	1
Component	VirB10	VirB11	VirD4
Number	1	1	1

The information of T4SS components from NC_012040

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Cla_a003	7383..7985 [-], 603	222778490	site-specific recombinase/resolvase
2	Cla_a004	8107..8331 [-], 225	222778491	hypothetical protein
3	Cla_a005	8336..9004 [-], 669	222778492	plasmid partitioning protein
4	Cla_a006	9272..10090 [-], 819	222778493	hypothetical protein
5	Cla_a007	10559..10894 [-], 336	222778494	hypothetical protein
6	Cla_a008	11349..11609 [+], 261	222778495	attachment mediating protein TraC/VirB2	VirB2
7	Cla_a009	11616..14390 [+], 2775	222778496	secretion/conjugal transfer ATPase VirB3/4	VirB4
8	Cla_a010	14387..15379 [+], 993	222778497	conjugal transfer protein VirB5	VirB5
9	Cla_a011	15393..15977 [+], 585	222778498	putative antirepressor, Rha family
10	Cla_a012	16476..16769 [+], 294	222778499	hypothetical protein
11	Cla_a013	16766..17317 [+], 552	222778500	putative antirepressor, BRO family
12	Cla_a014	17607..18617 [+], 1011	222778501	conjugal transfer protein TrbL/VirB6	VirB6
13	Cla_a015	18607..19068 [+], 462	222778502	hypothetical protein
14	Cla_a016	19359..19967 [+], 609	222778503	conjugal transfer protein TraJ/VirB8	VirB8
15	Cla_a017	19964..20899 [+], 936	222778504	conjugal transfer protein TraK/VirB9	VirB9
16	Cla_a018	20896..22071 [+], 1176	222778505	conjugal transfer protein TrbI/VirB10	VirB10
17	Cla_a019	22071..23072 [+], 1002	222778506	conjugal transfer protein VirB11	VirB11
18	Cla_a020	23062..23637 [+], 576	222778507	hypothetical protein
19	Cla_a021	23627..25423 [+], 1797	222778508	conjugal transfer protein TraG/VirD4	VirD4
20	Cla_a022	25407..25844 [+], 438	222778509	hypothetical protein
21	Cla_a023	25965..26642 [+], 678	222778510	TrbM mating pair formation protein-like protein
22	Cla_a024	26635..27504 [+], 870	222778511	hypothetical protein
23	Cla_a025	27588..28256 [+], 669	222778512	hypothetical protein
24	Cla_a026	28310..30340 [+], 2031	222778513	DNA topoisomerase III TraE

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Miller WG; Wang G; Binnewies TT; Parker CT (2008). The complete genome sequence and analysis of the human pathogen Campylobacter lari. Foodborne Pathog Dis. 5(4):371-86. [PudMed:18713059]