SecReT4

T4SS
References

T4SS ID	237
Strain	Rhizobium etli CFN 42
Replicon	plasmid p42a [Browse all T4SS(s) in this replicon]
Accession	NC_007762
Location	167977..189497
Name	Trb
Function	conjugation
Classification	Type IVA; Type P
Experimental investigation has been performed on this T4SS.

T4SS components

Component	TrbB	TrbC	TrbD	TrbE	TrbF	TrbG	TrbH	TrbI	TrbJ
Number	1	1	1	1	1	1	1	1	1
Component	TrbK	TrbL	TrbN	TraF	TraG
Number	0	1	0	1	1

The information of T4SS components from NC_007762

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	RHE_PA00150	163928..164548 [-], 621	86359848	hypothetical protein
2	RHE_PA00151	164538..164846 [+], 309	86359849	hypothetical protein
3	RHE_PA00152	164992..165333 [+], 342	86359850	hypothetical protein
4	RHE_PA00153	165670..166161 [+], 492	86359851	hypothetical protein
5	RHE_PA00154	166701..166904 [-], 204	86359852	hypothetical protein
6	RHE_PA00155	167155..167733 [-], 579	86359853	nuclease
7	RHE_PA00156 (traGa)	167977..169914 [-], 1938	86359854	conjugal transfer coupling protein TraG	TraG
8	RHE_PA00157 (traDa)	169946..170161 [-], 216	86359855	conjugal transfer protein TraD
9	RHE_PA00158 (traCa)	170166..170462 [-], 297	86359856	conjugal transfer protein TraC
10	RHE_PA00159 (traAa)	170721..174032 [+], 3312	86359857	Dtr system oriT relaxase
11	RHE_PA00160 (traF)	174029..174595 [+], 567	86359858	conjugal transfer pilin processing protease TraF	TraF
12	RHE_PA00161 (traB)	174585..175748 [+], 1164	86359859	conjugal transfer protein TraB
13	RHE_PA00162 (traH)	175766..176380 [+], 615	86359860	conjugal transfer protein TraH
14	RHE_PA00163	176398..176775 [-], 378	86359861	hypothetical protein
15	RHE_PA00164	176772..177404 [-], 633	86359862	hypothetical protein
16	RHE_PA00165	177508..177729 [-], 222	86359863	transcriptional regulator protein
17	RHE_PA00166 (traM)	177958..178278 [+], 321	86359864	conjugal transfer transcriptional regulator (repressor) protein
18	RHE_PA00167 (traR)	178282..179001 [-], 720	86359865	conjugal transfer transcriptional regulator protein
19	RHE_PA00168 (cinRa)	179066..179851 [-], 786	86359866	autoinducer transcriptional regulator protein
20	RHE_PA00169 (trbI)	179970..181277 [-], 1308	86359867	conjugal transfer protein TrbI	TrbI
21	RHE_PA00170 (trbH)	181290..181727 [-], 438	86359868	conjugal transfer protein TrbH	TrbH
22	RHE_PA00171 (trbG)	181731..182543 [-], 813	86359869	conjugal transfer protein TrbG	TrbG
23	RHE_PA00172 (trbF)	182561..183223 [-], 663	86359870	conjugal transfer protein TrbF	TrbF
24	RHE_PA00173 (trbL)	183248..184666 [-], 1419	86359871	conjugal transfer protein TrbL	TrbL
25	RHE_PA00174 (trbJ)	184614..185417 [-], 804	86359872	conjugal transfer protein TrbJ	TrbJ
26	RHE_PA00175 (trbE)	185389..187845 [-], 2457	86359873	conjugal transfer protein TrbE	TrbE
27	RHE_PA00176 (trbD)	187855..188154 [-], 300	86359874	conjugal transfer protein TrbD	TrbD
28	RHE_PA00177 (trbC)	188147..188530 [-], 384	86359875	conjugal transfer protein C	TrbC
29	RHE_PA00178 (trbB)	188520..189497 [-], 978	86359876	conjugal transfer protein TrbB	TrbB
30	RHE_PA00179 (traIa)	189508..190131 [-], 624	86359877	autoinducer synthesis protein
31	RHE_PA00180 (repAa1)	190505..191722 [+], 1218	86359878	plasmid-partitioning protein RepA
32	RHE_PA00181 (repBa1)	191823..192830 [+], 1008	86359879	plasmid partitioning protein RepB
33	RHE_PA00182 (repCa1)	193018..194229 [+], 1212	86359880	replication initiation protein RepC

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

(1) Tun-Garrido C; Bustos P; Gonzalez V; Brom S (2003). Conjugative transfer of p42a from rhizobium etli CFN42, which is required for mobilization of the symbiotic plasmid, is regulated by quorum sensing. J Bacteriol. 185(5):1681-92. [PudMed:12591886]