 T4SS ID | 211 |
| Strain | Xanthomonas citri plasmid pXcB (NC_005240) |
| Replicon | plasmid pXcB [Browse all T4SS(s) in this replicon] |
| Accession | NC_005240 |
| Location | 3160..20294 |
| Name | VirB |
| Function | conjugation |
| Classification | Type IVA; Type P |
 Experimental investigation has been performed on this T4SS. | |
T4SS components |
| Component | VirB1 | VirB2 | VirB3 | VirB4 | VirB5 | VirB6 | VirB7 | VirB8 | VirB9 |
| Number | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 |
| Component | VirB10 | VirB11 | VirD4 | ||||||
| Number | 1 | 1 | 1 |
The information of T4SS components from NC_005240 | ||||||
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| # | Locus tag (Gene) | Coordinates [+/-], size (bp) | Protein GI | Product | Component | |
| 1 | pXcB_p01 (orf201) | 706..1527 [-], 822 | 38639497 | hypothetical protein | ||
| 2 | pXcB_p02 (orf202) | 2030..2359 [-], 330 | 38639524 | hypothetical protein | ||
| 3 | pXcB_p03 (mobD) | 2757..3143 [+], 387 | 38639507 | MobD | ||
| 4 | pXcB_p04 (virB2) | 3172..3549 [+], 378 | 38639508 | VirB2 | VirB2 | |
| 5 | pXcB_p05 (virB3) | 3546..3845 [+], 300 | 38639509 | VirB3 | VirB3 | |
| 6 | pXcB_p06 (virB4) | 3868..6501 [+], 2634 | 38639490 | VirB4 | VirB4 | |
| 7 | pXcB_p07 (virB5) | 6498..7163 [+], 666 | 38639504 | VirB5 | VirB5 | |
| 8 | pXcB_p08 (virB7) | 7229..7429 [+], 201 | 38639510 | VirB7 | VirB7 | |
| 9 | pXcB_p09 (orf106) | 7422..7829 [+], 408 | 38639525 | hypothetical protein | ||
| 10 | pXcB_p10 (virB6) | 7817..8683 [+], 867 | 38639496 | VirB6 | VirB6 | |
| 11 | pXcB_p11 (virB8) | 8680..9354 [+], 675 | 38639503 | VirB8 | VirB8 | |
| 12 | pXcB_p12 (virB9) | 9379..10167 [+], 789 | 38639499 | VirB9 | VirB9 | |
| 13 | pXcB_p13 (virB10) | 10164..11384 [+], 1221 | 38639492 | VirB10 | VirB10 | |
| 14 | pXcB_p14 (virB11) | 11395..12414 [+], 1020 | 38639502 | VirB11 | VirB11 | |
| 15 | pXcB_p15 (virB1) | 12425..13312 [+], 888 | 38639495 | VirB1 | VirB1 | |
| 16 | pXcB_p16 (orf113) | 13358..13945 [+], 588 | 38639506 | putative ATP/GTP binding protein | ||
| 17 | pXcB_p17 (orf114) | 13958..14563 [+], 606 | 38639505 | putative endonuclease | ||
| 18 | pXcB_p18 (orf115) | 14580..14978 [+], 399 | 38639511 | hypothetical protein | ||
| 19 | pXcB_p19 (yacA) | 15110..15397 [+], 288 | 38639512 | YacA | ||
| 20 | pXcB_p20 (yacB) | 15394..15681 [+], 288 | 38639513 | YacB | ||
| 21 | pXcB_p21 (trwC) | 15731..18706 [-], 2976 | 38639489 | TrwC | ||
| 22 | pXcB_p22 (trwB) | 18720..20294 [-], 1575 | 38639491 | TrwB | VirD4 | |
| 23 | pXcB_p23 (traA) | 20486..20881 [-], 396 | 38639514 | TraA | ||
| 24 | pXcB_p24 (traD) | 21269..21724 [+], 456 | 38639517 | TraD | ||
| 25 | pXcB_p25 (stbB) | 21795..22427 [+], 633 | 38639515 | StbB | ||
| 26 | pXcB_p26 (orf120) | 22437..22826 [+], 390 | 38639516 | hypothetical protein | ||
| 27 | pXcB_p27 | 22978..23295 [-], 318 | 38639518 | hypothetical protein | ||
| 28 | pXcB_p28 (orf122) | 23463..23894 [+], 432 | 38639519 | hypothetical protein | ||
| 29 | pXcB_p29 (tnpR) | 24077..25039 [-], 963 | 38639494 | TnpR | ||
 Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any. |
Download FASTA format files |
| Proteins Genes |
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(1) El Yacoubi B; Brunings AM; Yuan Q; Shankar S; Gabriel DW (2007). In planta horizontal transfer of a major pathogenicity effector gene. Appl Environ Microbiol. 73(5):1612-21. [PudMed:17220258]
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| This literature contains experimental investigation |