SecReT4

T4SS
References

T4SS ID	193
Strain	Xanthobacter autotrophicus Py2
Replicon	plasmid pXAUT01 [Browse all T4SS(s) in this replicon]
Accession	NC_009717
Location	218087..219994; 301042..310625
Name	VirB
Function	NA
Classification	Type IVA; Type P
This T4SS is identified in this study.

T4SS components

Component	VirB1	VirB2	VirB3	VirB4	VirB5	VirB6	VirB7	VirB8	VirB9
Number	1	1	1	1	1	1	1	1	1
Component	VirB10	VirB11	VirD4
Number	1	1	1

The information of T4SS components from NC_009717
Region 1: 218087..219994

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Xaut_4994	213359..214555 [-], 1197	154243856	hypothetical protein
2	Xaut_4995	214672..215550 [-], 879	154243857	hypothetical protein
3	Xaut_4996	216239..216382 [+], 144	154243858	hypothetical protein
4	Xaut_4997	216754..217191 [+], 438	154243859	hypothetical protein
5	Xaut_4998	217369..217659 [-], 291	154243860	addiction module antitoxin
6	Xaut_4999	217646..217945 [-], 300	154243861	addiction module antitoxin
7	Xaut_5000	218087..219994 [-], 1908	154243862	conjugal transfer coupling protein TraG	VirD4
8	Xaut_5001	219991..220233 [-], 243	154243863	conjugal transfer TraD family protein
9	Xaut_5002	220280..220513 [-], 234	154243864	TraC family protein

Region 2: 301042..310625

#	Locus tag (Gene)	Coordinates [+/-], size (bp)	Protein GI	Product	Component
1	Xaut_5073	296635..297402 [-], 768	154243934	short-chain dehydrogenase/reductase SDR
2	Xaut_5074	297453..298283 [-], 831	154243935	short-chain dehydrogenase/reductase SDR
3	Xaut_5075	298298..298690 [-], 393	154243936	2-oxopent-4-enoate hydratase
4	Xaut_5076	298744..299040 [+], 297	154243937	hypothetical protein
5	Xaut_5077	299638..300171 [-], 534	154243938	hypothetical protein
6	Xaut_5078	301042..302055 [-], 1014	154243939	P-type DNA transfer ATPase VirB11	VirB11
7	Xaut_5079	302070..303230 [-], 1161	154243940	conjugation TrbI family protein	VirB10
8	Xaut_5080	303241..304101 [-], 861	154243941	P-type conjugative transfer protein VirB9	VirB9
9	Xaut_5081	304098..304769 [-], 672	154243942	VirB8 family protein	VirB8
10	Xaut_5082	304769..305050 [-], 282	154243943	type IV secretion system protein VirB7	VirB7
11	Xaut_5083	305091..306023 [-], 933	154243944	TrbL/VirB6 plasmid conjugal transfer protein	VirB6
12	Xaut_5084	306027..306260 [-], 234	154243945	hypothetical protein
13	Xaut_5085	306257..306952 [-], 696	154243946	P-type DNA transfer protein VirB5	VirB5
14	Xaut_5086	306952..309324 [-], 2373	154243947	type IV secretion/conjugal transfer ATPase	VirB4
15	Xaut_5087	309311..309649 [-], 339	154243948	type IV secretory pathway VirB3 family protein	VirB3
16	Xaut_5088	309655..309957 [-], 303	154243949	VIRB2 type IV secretion fmaily protein	VirB2
17	Xaut_5089	309963..310625 [-], 663	154243950	transport secretion system IV, VirB1 protein	VirB1
18	Xaut_5090	310629..311150 [-], 522	154243951	hypothetical protein
19	Xaut_5091	311240..311593 [+], 354	154243952	hypothetical protein
20	Xaut_5092	311912..312250 [+], 339	154243953	prevent-host-death family protein
21	Xaut_5093	312265..313464 [+], 1200	154243954	transposase mutator type
22	Xaut_5095	313890..314516 [+], 627	154243955	hypothetical protein

Genes in the 5-Kb flanking regions if available, or non-essential genes in the T4SS gene cluster if any.

Download FASTA format files

Proteins Genes

Identified as part of this study from NC_009717