| Protein ID: 86359771 |
 T4SS name [ID] | VirB [18] |
| Gene symbol | virD4 |
| Locus tag | RHE_PA00070 |
| Strain | Rhizobium etli CFN 42 |
| Replicon | plasmid p42a [GenBank: NC_007762] [Browse all T4SS(s) in this replicon] |
| Location [Strand] | 75279..77279 [+] |
| Product | type IV secretion system protein VirD4 |
| Component type | VirD4 |
| UniProt ID | Q2K2F8 |
| KEGG ID | ret:RHE_PA00070 |
| PDB ID | NA |
| Domain hit(s) vs Pfam | T4SS-DNA_transf [PF02534], Evalue: 8.4e-157, Aligned region: 97..538 TraG-D_C [PF12696], Evalue: 2.4e-28, Aligned region: 391..508 TrwB_AAD_bind [PF10412], Evalue: 2.8e-23, Aligned region: 138..520 AAA_10 [PF12846], Evalue: 4.7e-09, Aligned region: 140..467 |
| Protein Sequence: 666 a.a. [Download] |
| >gi|86359771|ref|YP_471662.1| transport secretion system IV, VirD4 protein [Rhizobium etli CFN 42] MNSSKSTPLRLAVSVVCSLAAGLCVASLYVTFRQGFNGEAMMTFSVFAIWYESPLYLGHTTSVFYYALAI VVSTSAVVLLSQLFVSLRNREHHGTARWAEFGEMRRAGYLQRYTSINGAVFGKTCGPHWFGSYLTNGEQP HSLVVAPTRAGKGVGVVIPTLLTFRGSVIALDVKGELFDLTSRARKANGNVVFKFAPLDPERRTHCYNPV LDIAAMPPERQFTETRRLAANLITAKGKGAEGFIDGARDLFVAGILACIERGTPTIGAVYDLFAQPGEKY KLFAQLAEESQNKEAQRIFDNMAGNDTKILTSYTSVLGDGGLNLWADPLVKAATSRSDFSIYDLRRRKTC VYLCVSPNDLEVVAPLMRLLFQQVVSILQRSLPGKDERYEVLFLLDEFRHLGKLEAIETAITTIAGYNGR FMFIIQSLSALTGTYDEAGKQNFLSNTGVQVFMATADDETPTYISKAIGEYTFKARSTSYNQTRMFDQNI QISDQGAPLLRPEQVRLIDDRNEIILIKGHPPLKLRKVQYYSDRALKRIFEAQTGSLPEPAPLVLPENIN RGDLEQPTVLAAAREPGDKDFVGDNAETDGYNGNCNHDNDGAIGFDIPYGPIEIDDLEEYASTACVTADA GPSAEVAPALVAQEQLLKRIIALQQRYRSGSSNPGD |
| Nucleotide Sequence: 2001 bp [Download] |
| >gi|86359705|ref|NC_007762.1|:75279-77279 Rhizobium etli CFN 42 plasmid p42a, complete sequence ATGAACTCGAGCAAGAGCACGCCCCTACGTTTGGCCGTTAGTGTCGTATGCTCGCTGGCAGCCGGTCTTT GTGTTGCAAGCTTGTATGTAACGTTCCGCCAAGGCTTTAATGGCGAAGCGATGATGACCTTCAGTGTCTT CGCCATCTGGTACGAGTCGCCGCTCTATCTGGGGCATACGACCTCGGTATTCTACTACGCTCTGGCCATT GTCGTATCAACTTCAGCCGTCGTTCTACTCAGCCAACTGTTCGTGTCGCTGCGCAACCGCGAGCATCATG GAACGGCTCGCTGGGCAGAATTCGGGGAAATGCGACGTGCCGGCTACCTGCAGCGTTACACCAGTATCAA TGGTGCGGTGTTTGGCAAGACCTGTGGTCCCCACTGGTTCGGCAGCTATCTGACCAACGGCGAACAGCCC CATAGTCTGGTCGTCGCGCCGACGCGAGCCGGCAAGGGCGTCGGCGTCGTCATTCCGACGCTGCTGACCT TCAGGGGCTCGGTGATAGCACTCGATGTCAAAGGTGAGCTTTTTGACCTGACGTCCAGGGCACGAAAGGC AAACGGCAACGTCGTTTTCAAGTTCGCGCCTCTGGATCCGGAGCGACGGACCCATTGCTACAATCCGGTT CTCGATATTGCGGCAATGCCTCCCGAGAGGCAGTTTACCGAGACACGCCGACTTGCTGCAAACCTTATCA CTGCGAAAGGCAAGGGAGCGGAAGGCTTCATCGATGGCGCACGAGACCTTTTTGTTGCGGGTATCCTTGC TTGTATCGAGCGCGGCACTCCGACAATAGGCGCAGTCTACGACCTTTTTGCCCAGCCTGGCGAGAAGTAC AAGCTTTTTGCGCAACTCGCGGAAGAAAGCCAGAATAAGGAGGCTCAGCGCATCTTTGACAACATGGCGG GCAACGACACGAAAATCCTAACCTCCTATACGTCGGTGCTCGGCGACGGCGGTCTCAATCTTTGGGCTGA TCCGCTGGTCAAGGCAGCGACCAGCCGATCCGACTTTTCCATCTACGACCTGCGTCGCAGGAAGACCTGC GTTTATCTTTGTGTAAGTCCCAACGATCTTGAGGTCGTTGCGCCGTTGATGCGCCTTCTTTTTCAGCAGG TCGTGTCGATTTTGCAGCGATCCCTGCCAGGGAAGGACGAGCGCTACGAAGTTCTGTTTCTCCTCGACGA ATTCAGGCATCTGGGCAAACTTGAGGCCATCGAGACCGCGATCACCACCATCGCCGGATACAATGGCCGT TTCATGTTTATTATTCAGAGTCTCTCCGCGCTGACGGGTACCTACGACGAGGCGGGCAAACAGAACTTTC TCAGCAATACCGGTGTGCAGGTATTTATGGCCACCGCTGACGACGAAACACCGACATATATCTCGAAGGC TATCGGGGAATATACGTTCAAGGCGCGCTCGACCTCCTATAATCAGACACGCATGTTCGACCAGAACATC CAGATCTCCGATCAGGGGGCACCGCTTTTGCGCCCCGAACAGGTGCGCTTGATCGACGACAGGAATGAAA TCATCCTCATAAAGGGGCACCCGCCACTTAAACTGCGAAAAGTGCAATATTACTCGGATCGCGCGCTGAA GCGTATTTTCGAAGCCCAGACCGGTTCGCTCCCCGAGCCAGCGCCCCTTGTGCTGCCGGAGAACATCAAT CGCGGAGACCTGGAACAGCCGACTGTCCTCGCGGCGGCGCGAGAGCCCGGCGACAAGGATTTTGTAGGCG ACAATGCGGAAACCGATGGGTACAACGGCAACTGCAATCACGACAACGATGGGGCCATCGGATTTGATAT CCCGTACGGCCCGATTGAAATCGACGATCTGGAGGAATACGCCAGCACAGCTTGTGTCACCGCCGATGCC GGCCCGTCTGCCGAAGTCGCTCCGGCTCTGGTTGCGCAAGAACAATTGCTGAAACGGATAATCGCGCTTC AGCAACGGTATAGGTCTGGCTCGTCAAACCCCGGGGATTGA |