Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutS/mutS2   Type   Machinery gene
Locus tag   EL076_RS08600 Genome accession   NZ_LR134275
Coordinates   1714407..1716755 (+) Length   782 a.a.
NCBI ID   WP_126430045.1    Uniprot ID   -
Organism   Streptococcus vestibularis strain NCTC12167     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1709407..1721755
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL076_RS08590 (NCTC12167_01694) mutY 1710136..1711287 (+) 1152 WP_048787885.1 A/G-specific adenine glycosylase -
  EL076_RS08595 (NCTC12167_01696) polA 1711593..1714232 (-) 2640 WP_117646769.1 DNA polymerase I -
  EL076_RS08600 (NCTC12167_01697) mutS/mutS2 1714407..1716755 (+) 2349 WP_126430045.1 endonuclease MutS2 Machinery gene
  EL076_RS08605 (NCTC12167_01698) - 1716823..1717050 (+) 228 WP_048787887.1 hypothetical protein -
  EL076_RS08610 (NCTC12167_01699) - 1717187..1717840 (-) 654 WP_048787888.1 metal-dependent transcriptional regulator -
  EL076_RS08615 tpx 1718390..1718881 (-) 492 Protein_1620 thiol peroxidase -
  EL076_RS08620 (NCTC12167_01700) - 1718969..1719901 (-) 933 WP_117646771.1 metal ABC transporter substrate-binding protein -
  EL076_RS08625 (NCTC12167_01701) - 1719922..1720755 (-) 834 WP_003093234.1 metal ABC transporter permease -
  EL076_RS08630 (NCTC12167_01702) - 1720752..1721474 (-) 723 WP_117646772.1 metal ABC transporter ATP-binding protein -

Sequence

Protein


Download         Length: 782 a.a.        Molecular weight: 87698.02 Da        Isoelectric Point: 6.6662

>NTDB_id=999737 EL076_RS08600 WP_126430045.1 1714407..1716755(+) (mutS/mutS2) [Streptococcus vestibularis strain NCTC12167]
MNTKILDQLEFNKVKDQFTEYLQTEQAQAELRDLVPMTNPERIQNQFTEIQEMSEIFVEHHSFAIGSLRDISEPLRRLEL
DADLNIQELIAIKKVLQASADLGRFYADLENVELVALKRLFEKIEAFPSLQGSLQSINDSGFIEHFASPELQNIRRQLKA
CDDAIRQTLQDILKKSGHMLAESLIASRNGRSVLPVKNTYRNRISGVVHDISSSGNTVYIEPRAVIQLNEEITQLRADER
HEMARILHELSDQLRPQAAAISNNAWILGHMDFIRGKYLYLHNKKAVIPKISDNQTLQLLNVRHPLLINPVANDLRFDED
LTAIVITGPNTGGKTVMLKTLGLAQLMAQSGLPILADKGSRVAIFQEIFADIGDEQSIEQSLSTFSSHMTHIVEILNAAD
SNSLVLVDELGAGTDPQEGASLAMAILEHLRLSQIKTMATTHYPELKAYGIETQHVENASMEFDTATLSPTYRFMQGVPG
RSNAFEIARRLGLNEIIVKEAENLTDTDSDVNRIIEQLEAQTVETQKRLEHIKDVEQENLKFNRAVKKLYNEFSHEYDKE
LEKAQKDIQDMVDTALAESDSILKTLHDKSQLKPHEVIDAKGKLKKLAPQVDLSKNKVLRKAKKEKAARAPRVGDDIIVT
AYGQRGTLTSQAKNGNWEAQVGLIKMTLKADEFTLVRAQAEVQQPKKKQINVVKKAKKASGGPRARLDLRGKRYEEAMQE
LDAFIDQALLNNMSQVDIIHGIGTGVIRDAVTKYLRRHRHVKSFEYAPQSAGGSGCTIATLG

Nucleotide


Download         Length: 2349 bp        

>NTDB_id=999737 EL076_RS08600 WP_126430045.1 1714407..1716755(+) (mutS/mutS2) [Streptococcus vestibularis strain NCTC12167]
ATGAACACAAAGATTTTAGATCAATTAGAATTTAACAAGGTCAAGGACCAGTTCACAGAATACCTACAGACTGAGCAGGC
TCAGGCAGAGTTACGTGACTTGGTACCTATGACCAATCCAGAAAGAATTCAAAATCAATTTACAGAAATCCAAGAAATGT
CTGAGATTTTCGTAGAGCATCATAGCTTTGCCATTGGGAGCTTAAGAGATATTTCTGAGCCCTTGCGTCGCTTGGAACTG
GATGCTGACCTCAACATCCAGGAGCTCATTGCCATCAAGAAGGTCTTGCAAGCTTCAGCTGACCTTGGCCGCTTCTACGC
TGACCTTGAAAATGTTGAGCTCGTGGCTCTTAAACGTCTTTTTGAAAAGATTGAGGCCTTCCCAAGTCTACAAGGTAGCC
TTCAAAGTATCAATGATAGTGGTTTTATTGAACATTTTGCTAGCCCTGAGTTGCAAAATATCCGTCGTCAACTTAAGGCT
TGTGATGATGCCATTCGCCAGACCTTGCAAGACATTCTTAAGAAATCTGGCCACATGTTGGCTGAGAGCTTAATTGCTAG
TCGTAATGGCCGTTCAGTGCTTCCTGTCAAAAATACCTACCGTAACCGTATTTCTGGTGTTGTGCACGACATCTCAAGCT
CTGGGAACACAGTGTATATCGAGCCACGCGCTGTTATCCAGCTTAACGAAGAAATTACACAATTACGTGCAGACGAACGC
CACGAGATGGCCCGTATCCTACACGAACTGTCTGATCAACTCCGTCCACAGGCTGCTGCAATTTCTAATAACGCTTGGAT
TTTGGGCCATATGGACTTCATTAGAGGAAAATACCTCTATCTCCATAATAAAAAGGCGGTTATTCCAAAGATTAGTGACA
ACCAAACACTCCAACTGCTTAACGTTCGTCACCCGCTTCTAATCAATCCAGTAGCCAACGATTTGAGATTCGATGAGGAT
CTTACAGCCATTGTCATCACAGGTCCTAATACTGGTGGTAAAACGGTCATGCTTAAAACGCTAGGACTAGCTCAACTGAT
GGCTCAATCTGGCCTTCCAATTTTGGCTGATAAGGGTAGTCGTGTAGCCATTTTCCAAGAGATTTTTGCGGACATCGGAG
ATGAACAATCTATCGAACAAAGTTTGTCAACTTTCTCTAGTCACATGACCCACATTGTTGAGATTCTGAATGCTGCCGAC
AGTAACAGCCTGGTCTTGGTCGATGAGCTTGGGGCTGGTACCGACCCTCAGGAAGGGGCTAGTCTAGCCATGGCAATCTT
AGAGCACCTTCGTTTGAGCCAGATTAAGACCATGGCTACCACTCACTATCCTGAGCTTAAGGCCTATGGCATTGAGACCC
AACATGTAGAAAATGCCAGCATGGAGTTTGACACAGCGACTTTAAGCCCTACCTATCGTTTTATGCAGGGGGTTCCTGGT
CGTTCTAATGCCTTTGAGATTGCTCGCCGCCTCGGTTTGAATGAGATTATTGTCAAGGAAGCAGAAAACCTCACGGATAC
TGATAGTGATGTCAACCGTATCATCGAGCAACTTGAAGCCCAAACTGTGGAAACACAAAAACGTCTGGAACACATCAAGG
ACGTTGAGCAAGAGAACCTTAAATTCAACCGTGCGGTCAAGAAACTCTATAACGAATTCTCCCATGAGTACGACAAGGAA
CTCGAAAAAGCTCAAAAAGACATTCAAGATATGGTGGATACAGCTTTGGCTGAGAGCGATAGTATTCTCAAAACTCTCCA
TGATAAGAGTCAACTCAAGCCTCATGAAGTTATCGATGCCAAAGGAAAACTCAAGAAACTTGCCCCACAAGTGGACCTCT
CTAAGAATAAGGTCCTTCGTAAAGCCAAGAAAGAAAAGGCTGCGCGTGCCCCTCGTGTCGGAGACGATATCATCGTTACC
GCCTATGGTCAACGAGGCACTCTTACTAGTCAGGCCAAAAATGGTAACTGGGAAGCCCAAGTAGGTCTCATCAAGATGAC
CCTCAAGGCGGATGAATTCACTCTCGTTCGTGCTCAAGCTGAGGTGCAACAGCCTAAGAAAAAACAGATTAACGTAGTTA
AAAAAGCCAAGAAGGCATCTGGTGGTCCTCGTGCCCGTCTAGACCTTCGTGGGAAACGTTACGAAGAAGCCATGCAAGAG
CTTGATGCCTTTATTGACCAAGCCCTACTTAACAACATGAGTCAGGTGGACATCATCCACGGTATTGGTACCGGTGTCAT
CCGTGACGCGGTGACTAAATATCTCCGCCGTCATCGTCATGTTAAAAGTTTTGAATATGCCCCACAAAGTGCCGGTGGTT
CCGGATGCACCATTGCAACCTTGGGATAA

Domains

Predicted by InterProScan.

MutS2 and Smr-associated SH3 domain (MSSS)

(633-672)

MutS domain V (MutS_V)

(324-505)

Smr domain (Smr)

(707-781)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutS/mutS2 Bacillus subtilis subsp. subtilis str. 168

39.596

100

0.402