Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   EL076_RS02890 Genome accession   NZ_LR134275
Coordinates   568069..569805 (+) Length   578 a.a.
NCBI ID   WP_126429163.1    Uniprot ID   -
Organism   Streptococcus vestibularis strain NCTC12167     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 563069..574805
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  EL076_RS02885 (NCTC12167_00579) - 566132..567381 (-) 1250 Protein_505 ISL3 family transposase -
  EL076_RS02890 (NCTC12167_00580) rcrP 568069..569805 (+) 1737 WP_126429163.1 ABC transporter ATP-binding protein Regulator
  EL076_RS02895 (NCTC12167_00581) rcrQ 569818..571605 (+) 1788 WP_126429165.1 ABC transporter ATP-binding protein Regulator
  EL076_RS02900 (NCTC12167_00582) queA 571705..572748 (-) 1044 WP_126429167.1 tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA -
  EL076_RS02905 (NCTC12167_00583) - 572899..573600 (+) 702 WP_126429169.1 glucosamine-6-phosphate deaminase -
  EL076_RS02910 (NCTC12167_00584) - 573791..574774 (+) 984 WP_126429171.1 rhodanese-related sulfurtransferase -

Sequence

Protein


Download         Length: 578 a.a.        Molecular weight: 64799.73 Da        Isoelectric Point: 5.5882

>NTDB_id=999680 EL076_RS02890 WP_126429163.1 568069..569805(+) (rcrP) [Streptococcus vestibularis strain NCTC12167]
MAFIWSYLRRYPKWLAMNFTAAILFVIANLGLPTVLARMIDEGINRGDADKLYTYAWVMFGVVLTGIVGRVLLAYAVGKL
TTTMVQVMRNDIYAKLQEYSHHEYEQIGVSSLVTRITSDAFVLMQFADQLLKLGVITPLMMVSSVFLILTTSPSLAWIVA
ISLPFLAVVVWYVAVKTRPLSEKQQTTLDKINQYARENLTGLRVIRAFAREDFQEKKFASENAVYADNSNKLFKLTGLTE
PLFVQIIIAMIVAIVWFALEPLGSGTLAIGDLVAFIEYSFHALLSFLFLANLFTMYPRTAVSSERLQEIMDMPISINPNE
DGVTETETKGYLEFDNVTFAYPGETESPVLHNISFKAKPGETIAFIGSTGSGKSSLVQLIPRFYDVTLGRILVDGVDVRD
YNLKALRRKIGFIPQKALLFTGTIGENIRYGKENASHEELNQATDVAQAKEFIESKEERYDSHLAEGGSNLSGGQKQRLS
IARAVVKRPDLYIFDDSFSALDYKTDATLRRRLKEVTQDATVLIVAQRVGTIMDADQIIVLDKGEIVGRGRHEELMESND
IYREIANSQLNQKSLTED

Nucleotide


Download         Length: 1737 bp        

>NTDB_id=999680 EL076_RS02890 WP_126429163.1 568069..569805(+) (rcrP) [Streptococcus vestibularis strain NCTC12167]
ATGGCTTTTATTTGGTCTTATCTCAGGCGTTATCCTAAGTGGCTAGCGATGAATTTTACGGCGGCCATTTTATTTGTTAT
TGCCAATTTGGGGCTGCCGACGGTTCTTGCCAGAATGATTGATGAGGGAATTAACCGTGGGGATGCAGACAAGCTTTATA
CCTATGCTTGGGTCATGTTTGGTGTGGTCTTAACTGGTATTGTTGGTCGTGTGCTTCTGGCCTATGCGGTTGGTAAGTTG
ACCACTACTATGGTGCAAGTCATGCGTAATGACATTTATGCTAAGCTTCAGGAGTATTCACACCATGAGTACGAACAAAT
TGGGGTATCTTCTTTGGTGACTCGTATCACGTCGGATGCTTTTGTTCTCATGCAGTTTGCAGATCAACTTCTCAAGCTGG
GTGTTATCACTCCTTTGATGATGGTTTCCAGTGTCTTCTTGATTTTGACGACAAGTCCATCTTTGGCTTGGATTGTGGCA
ATCTCCTTGCCTTTTCTAGCCGTAGTTGTCTGGTATGTGGCGGTAAAAACGCGTCCGCTTTCTGAAAAGCAACAGACAAC
GCTCGACAAGATTAACCAGTATGCTCGTGAAAATCTGACTGGACTTCGTGTCATCCGTGCTTTCGCTAGAGAAGATTTTC
AAGAGAAGAAGTTCGCTTCTGAAAATGCTGTCTATGCGGATAATTCAAACAAACTTTTTAAATTGACTGGTTTGACTGAG
CCACTTTTTGTGCAAATCATCATAGCCATGATTGTGGCAATTGTTTGGTTTGCTCTTGAGCCATTAGGTTCTGGGACTTT
GGCAATCGGTGACTTGGTTGCCTTTATTGAGTACAGCTTCCATGCACTATTGTCTTTCCTTTTCCTAGCCAATCTCTTTA
CCATGTATCCTCGTACAGCGGTATCTAGTGAACGTCTGCAGGAAATTATGGACATGCCGATTTCTATCAATCCAAATGAA
GATGGCGTGACAGAAACCGAGACTAAGGGATATTTGGAGTTTGACAATGTGACCTTTGCCTATCCTGGTGAAACTGAAAG
TCCTGTCCTACACAATATTTCCTTCAAGGCCAAACCTGGTGAAACCATTGCCTTTATTGGGTCTACGGGTTCAGGAAAAT
CATCACTTGTACAGTTGATTCCACGCTTTTATGATGTAACACTTGGACGCATTCTTGTGGATGGTGTGGATGTCCGTGAC
TACAATCTTAAGGCGCTTCGTCGTAAGATTGGTTTTATTCCACAAAAAGCTCTGCTCTTTACTGGGACGATCGGTGAAAA
TATTCGTTATGGTAAGGAAAATGCCAGTCATGAAGAATTGAATCAAGCTACTGATGTGGCTCAAGCCAAGGAATTTATCG
AAAGTAAGGAAGAACGCTATGATTCTCACTTGGCTGAAGGTGGTAGCAACCTTTCTGGGGGACAGAAGCAGCGTTTATCA
ATTGCACGTGCGGTGGTTAAACGTCCTGATCTCTACATCTTTGATGATTCCTTCTCTGCCTTGGACTACAAGACTGATGC
GACCTTGCGTCGTCGTCTAAAAGAAGTGACCCAGGATGCGACGGTCTTGATCGTGGCTCAACGTGTGGGAACTATTATGG
ATGCTGATCAGATTATCGTTCTTGATAAGGGTGAAATTGTTGGTCGTGGTCGTCACGAAGAGCTTATGGAAAGTAATGAC
ATTTACCGTGAGATTGCTAATTCACAATTGAATCAAAAGAGTCTTACGGAAGACTAG

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(350-497)

ABC transporter transmembrane region (ABC_membrane)

(17-279)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

39.623

91.696

0.363

Multiple sequence alignment