Detailed information NTG0998752

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: ABDZ17_RS09905
• Genome accession: NZ_CP155724
• Coordinates: 2105775..2106476 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain 2024CK-00319
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2100775..2111476

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ABDZ17_RS09875 (ABDZ17_09875)	-	2101081..2101524 (-)	444	WP_001246675.1	SRPBCC family protein	-
ABDZ17_RS09880 (ABDZ17_09880)	tadA	2101594..2102097 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
ABDZ17_RS09885 (ABDZ17_09885)	-	2102104..2103228 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
ABDZ17_RS09890 (ABDZ17_09890)	ung	2103225..2103938 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
ABDZ17_RS09895 (ABDZ17_09895)	-	2103989..2104585 (-)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
ABDZ17_RS09900 (ABDZ17_09900)	gspK	2104816..2105775 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
ABDZ17_RS09905 (ABDZ17_09905)	xcpW	2105775..2106476 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
ABDZ17_RS09910 (ABDZ17_09910)	xcpV	2106476..2106856 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
ABDZ17_RS09915 (ABDZ17_09915)	-	2106846..2107400 (-)	555	WP_000841373.1	type II secretion system protein	-
ABDZ17_RS09920 (ABDZ17_09920)	-	2107410..2108018 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
ABDZ17_RS09925 (ABDZ17_09925)	-	2108056..2108829 (-)	774	WP_000497298.1	TatD family hydrolase	-
ABDZ17_RS09930 (ABDZ17_09930)	-	2108847..2109188 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
ABDZ17_RS09935 (ABDZ17_09935)	-	2109200..2110180 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
ABDZ17_RS09940 (ABDZ17_09940)	kdsB	2110192..2110953 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=998752 ABDZ17_RS09905 WP_000594589.1 2105775..2106476(-) (xcpW) [Acinetobacter baumannii strain 2024CK-00319]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=998752 ABDZ17_RS09905 WP_000594589.1 2105775..2106476(-) (xcpW) [Acinetobacter baumannii strain 2024CK-00319]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996