Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | ABDZ21_RS17725 | Genome accession | NZ_CP155721 |
| Coordinates | 3665913..3666338 (-) | Length | 141 a.a. |
| NCBI ID | WP_000788339.1 | Uniprot ID | A0A009QPU5 |
| Organism | Acinetobacter baumannii strain 2024CK-00246 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3660913..3671338
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABDZ21_RS17695 (ABDZ21_17695) | - | 3661442..3662476 (+) | 1035 | WP_024432274.1 | lipase secretion chaperone | - |
| ABDZ21_RS17700 (ABDZ21_17700) | - | 3662591..3663532 (+) | 942 | WP_086223958.1 | triacylglycerol lipase | - |
| ABDZ21_RS17705 (ABDZ21_17705) | rplS | 3663585..3663953 (-) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| ABDZ21_RS17710 (ABDZ21_17710) | trmD | 3664161..3664901 (-) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| ABDZ21_RS17715 (ABDZ21_17715) | rimM | 3664947..3665495 (-) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| ABDZ21_RS17720 (ABDZ21_17720) | rpsP | 3665515..3665766 (-) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| ABDZ21_RS17725 (ABDZ21_17725) | pilE | 3665913..3666338 (-) | 426 | WP_000788339.1 | type IV pilin protein | Machinery gene |
| ABDZ21_RS17730 (ABDZ21_17730) | pilY2 | 3666335..3666817 (-) | 483 | WP_001046416.1 | type IV pilin protein | Machinery gene |
| ABDZ21_RS17735 (ABDZ21_17735) | pilY1 | 3666830..3670684 (-) | 3855 | WP_024432273.1 | PilC/PilY family type IV pilus protein | Machinery gene |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15210.39 Da Isoelectric Point: 7.8144
>NTDB_id=998717 ABDZ21_RS17725 WP_000788339.1 3665913..3666338(-) (pilE) [Acinetobacter baumannii strain 2024CK-00246]
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKMVNNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
MKNGFSLIEIMVVVAIVAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESQKMVNNRYPSNATIQSIYGSNVSPLQG
KALYTLAFTTLNDSTWVLTATPIANTSQAGDGIICLNDQGQKFWAKGATDCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=998717 ABDZ21_RS17725 WP_000788339.1 3665913..3666338(-) (pilE) [Acinetobacter baumannii strain 2024CK-00246]
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
GTGAAGAATGGTTTTTCTTTAATTGAAATTATGGTTGTGGTAGCAATAGTTGCAATTTTAGCGGCTATAGCCACCCCTTC
ATATTTACAATATTTGCGTAAAGGACATCGTACTGCTGTTCAATCCGAAATGATGAATATTGCGCAGACTTTAGAGTCTC
AAAAAATGGTGAATAACCGTTATCCCTCAAATGCAACTATACAATCAATTTATGGCTCTAATGTGAGTCCTCTTCAGGGC
AAAGCTTTATATACTTTAGCTTTTACTACTTTAAACGATTCGACATGGGTGCTTACGGCAACACCAATCGCTAATACTTC
ACAAGCTGGTGATGGAATTATTTGCTTAAATGATCAAGGGCAAAAATTTTGGGCAAAAGGTGCTACAGATTGTGCACTAT
CGGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
97.872 |
100 |
0.979 |
| comF | Acinetobacter baylyi ADP1 |
51.429 |
99.291 |
0.511 |